Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A718:A711
Extra
PDB:
ATOM 1 O3' A A 717 -39.644 13.762 -4.434 1.00 46.99 O
ATOM 2 P C A 718 -38.970 12.305 -4.355 1.00 36.48 P
ATOM 3 OP1 C A 718 -40.055 11.344 -4.023 1.00 36.48 O
ATOM 4 OP2 C A 718 -37.797 12.408 -3.438 1.00 36.48 O
ATOM 5 O5' C A 718 -38.473 12.069 -5.856 1.00 36.48 O
ATOM 6 C5' C A 718 -39.404 12.024 -6.930 1.00 36.48 C
ATOM 7 C4' C A 718 -38.790 12.509 -8.217 1.00 36.48 C
ATOM 8 O4' C A 718 -37.990 13.692 -7.955 1.00 36.48 O
ATOM 9 C3' C A 718 -37.816 11.554 -8.904 1.00 36.48 C
ATOM 10 O3' C A 718 -38.457 10.538 -9.667 1.00 36.48 O
ATOM 11 C2' C A 718 -36.970 12.502 -9.740 1.00 36.48 C
ATOM 12 O2' C A 718 -37.669 12.900 -10.909 1.00 36.48 O
ATOM 13 C1' C A 718 -36.856 13.707 -8.807 1.00 36.48 C
ATOM 14 N1 C A 718 -35.625 13.660 -7.968 1.00 36.06 N
ATOM 15 C2 C A 718 -34.358 13.833 -8.533 1.00 36.06 C
ATOM 16 O2 C A 718 -34.288 14.003 -9.741 1.00 36.06 O
ATOM 17 N3 C A 718 -33.243 13.791 -7.769 1.00 36.06 N
ATOM 18 C4 C A 718 -33.361 13.589 -6.452 1.00 36.06 C
ATOM 19 N4 C A 718 -32.282 13.536 -5.662 1.00 36.06 N
ATOM 20 C5 C A 718 -34.639 13.423 -5.843 1.00 36.06 C
ATOM 21 C6 C A 718 -35.730 13.463 -6.622 1.00 36.06 C
ATOM 22 P U A 719 -38.310 8.983 -9.246 1.00 37.12 P
ATOM 23 OP1 U A 719 -39.352 8.235 -9.998 1.00 37.12 O
ATOM 24 OP2 U A 719 -38.320 8.919 -7.748 1.00 37.12 O
ATOM 25 O5' U A 719 -36.870 8.599 -9.804 1.00 37.12 O
TER
ATOM 1 O3' G B 710 -22.028 14.397 -10.906 1.00 32.20 O
ATOM 2 P G B 711 -22.526 15.909 -10.729 1.00 31.36 P
ATOM 3 OP1 G B 711 -21.494 16.784 -11.334 1.00 31.36 O
ATOM 4 OP2 G B 711 -22.879 16.095 -9.296 1.00 31.36 O
ATOM 5 O5' G B 711 -23.828 15.919 -11.622 1.00 31.36 O
ATOM 6 C5' G B 711 -23.807 15.295 -12.883 1.00 31.36 C
ATOM 7 C4' G B 711 -25.134 14.700 -13.224 1.00 31.36 C
ATOM 8 O4' G B 711 -25.560 13.776 -12.195 1.00 31.36 O
ATOM 9 C3' G B 711 -26.297 15.655 -13.298 1.00 31.36 C
ATOM 10 O3' G B 711 -26.257 16.502 -14.423 1.00 31.36 O
ATOM 11 C2' G B 711 -27.465 14.692 -13.287 1.00 31.36 C
ATOM 12 O2' G B 711 -27.581 14.035 -14.540 1.00 31.36 O
ATOM 13 C1' G B 711 -26.979 13.675 -12.249 1.00 31.36 C
ATOM 14 N9 G B 711 -27.559 13.928 -10.906 1.00 31.16 N
ATOM 15 C8 G B 711 -26.988 14.211 -9.675 1.00 31.16 C
ATOM 16 N7 G B 711 -27.865 14.370 -8.704 1.00 31.16 N
ATOM 17 C5 G B 711 -29.090 14.171 -9.331 1.00 31.16 C
ATOM 18 C6 G B 711 -30.414 14.208 -8.827 1.00 31.16 C
ATOM 19 O6 G B 711 -30.790 14.427 -7.677 1.00 31.16 O
ATOM 20 N1 G B 711 -31.359 13.960 -9.812 1.00 31.16 N
ATOM 21 C2 G B 711 -31.077 13.705 -11.124 1.00 31.16 C
ATOM 22 N2 G B 711 -32.128 13.490 -11.930 1.00 31.16 N
ATOM 23 N3 G B 711 -29.853 13.663 -11.614 1.00 31.16 N
ATOM 24 C4 G B 711 -28.915 13.900 -10.672 1.00 31.16 C
ATOM 25 P G B 712 -26.530 18.085 -14.244 1.00 28.18 P
ATOM 26 OP1 G B 712 -26.411 18.706 -15.609 1.00 28.18 O
ATOM 27 OP2 G B 712 -25.630 18.572 -13.144 1.00 28.18 O
ATOM 28 O5' G B 712 -28.048 18.118 -13.764 1.00 28.18 O
TER
ATOM 2 P C A 718 -38.970 12.305 -4.355 1.00 36.48 P
ATOM 3 OP1 C A 718 -40.055 11.344 -4.023 1.00 36.48 O
ATOM 4 OP2 C A 718 -37.797 12.408 -3.438 1.00 36.48 O
ATOM 5 O5' C A 718 -38.473 12.069 -5.856 1.00 36.48 O
ATOM 6 C5' C A 718 -39.404 12.024 -6.930 1.00 36.48 C
ATOM 7 C4' C A 718 -38.790 12.509 -8.217 1.00 36.48 C
ATOM 8 O4' C A 718 -37.990 13.692 -7.955 1.00 36.48 O
ATOM 9 C3' C A 718 -37.816 11.554 -8.904 1.00 36.48 C
ATOM 10 O3' C A 718 -38.457 10.538 -9.667 1.00 36.48 O
ATOM 11 C2' C A 718 -36.970 12.502 -9.740 1.00 36.48 C
ATOM 12 O2' C A 718 -37.669 12.900 -10.909 1.00 36.48 O
ATOM 13 C1' C A 718 -36.856 13.707 -8.807 1.00 36.48 C
ATOM 14 N1 C A 718 -35.625 13.660 -7.968 1.00 36.06 N
ATOM 15 C2 C A 718 -34.358 13.833 -8.533 1.00 36.06 C
ATOM 16 O2 C A 718 -34.288 14.003 -9.741 1.00 36.06 O
ATOM 17 N3 C A 718 -33.243 13.791 -7.769 1.00 36.06 N
ATOM 18 C4 C A 718 -33.361 13.589 -6.452 1.00 36.06 C
ATOM 19 N4 C A 718 -32.282 13.536 -5.662 1.00 36.06 N
ATOM 20 C5 C A 718 -34.639 13.423 -5.843 1.00 36.06 C
ATOM 21 C6 C A 718 -35.730 13.463 -6.622 1.00 36.06 C
ATOM 22 P U A 719 -38.310 8.983 -9.246 1.00 37.12 P
ATOM 23 OP1 U A 719 -39.352 8.235 -9.998 1.00 37.12 O
ATOM 24 OP2 U A 719 -38.320 8.919 -7.748 1.00 37.12 O
ATOM 25 O5' U A 719 -36.870 8.599 -9.804 1.00 37.12 O
TER
ATOM 1 O3' G B 710 -22.028 14.397 -10.906 1.00 32.20 O
ATOM 2 P G B 711 -22.526 15.909 -10.729 1.00 31.36 P
ATOM 3 OP1 G B 711 -21.494 16.784 -11.334 1.00 31.36 O
ATOM 4 OP2 G B 711 -22.879 16.095 -9.296 1.00 31.36 O
ATOM 5 O5' G B 711 -23.828 15.919 -11.622 1.00 31.36 O
ATOM 6 C5' G B 711 -23.807 15.295 -12.883 1.00 31.36 C
ATOM 7 C4' G B 711 -25.134 14.700 -13.224 1.00 31.36 C
ATOM 8 O4' G B 711 -25.560 13.776 -12.195 1.00 31.36 O
ATOM 9 C3' G B 711 -26.297 15.655 -13.298 1.00 31.36 C
ATOM 10 O3' G B 711 -26.257 16.502 -14.423 1.00 31.36 O
ATOM 11 C2' G B 711 -27.465 14.692 -13.287 1.00 31.36 C
ATOM 12 O2' G B 711 -27.581 14.035 -14.540 1.00 31.36 O
ATOM 13 C1' G B 711 -26.979 13.675 -12.249 1.00 31.36 C
ATOM 14 N9 G B 711 -27.559 13.928 -10.906 1.00 31.16 N
ATOM 15 C8 G B 711 -26.988 14.211 -9.675 1.00 31.16 C
ATOM 16 N7 G B 711 -27.865 14.370 -8.704 1.00 31.16 N
ATOM 17 C5 G B 711 -29.090 14.171 -9.331 1.00 31.16 C
ATOM 18 C6 G B 711 -30.414 14.208 -8.827 1.00 31.16 C
ATOM 19 O6 G B 711 -30.790 14.427 -7.677 1.00 31.16 O
ATOM 20 N1 G B 711 -31.359 13.960 -9.812 1.00 31.16 N
ATOM 21 C2 G B 711 -31.077 13.705 -11.124 1.00 31.16 C
ATOM 22 N2 G B 711 -32.128 13.490 -11.930 1.00 31.16 N
ATOM 23 N3 G B 711 -29.853 13.663 -11.614 1.00 31.16 N
ATOM 24 C4 G B 711 -28.915 13.900 -10.672 1.00 31.16 C
ATOM 25 P G B 712 -26.530 18.085 -14.244 1.00 28.18 P
ATOM 26 OP1 G B 712 -26.411 18.706 -15.609 1.00 28.18 O
ATOM 27 OP2 G B 712 -25.630 18.572 -13.144 1.00 28.18 O
ATOM 28 O5' G B 712 -28.048 18.118 -13.764 1.00 28.18 O
TER
Atoms:
C2: (-34.358,13.833,-8.533)
OP1: (-40.055,11.344,-4.023)
OP2: (-37.797,12.408,-3.438)
C4: (-33.361,13.589,-6.452)
O5': (-38.473,12.069,-5.856)
C3': (-37.816,11.554,-8.904)
C1': (-36.856,13.707,-8.807)
O4': (-37.990,13.692,-7.955)
C5': (-39.404,12.024,-6.930)
P: (-38.970,12.305,-4.355)
O2: (-34.288,14.003,-9.741)
C4': (-38.790,12.509,-8.217)
C2': (-36.970,12.502,-9.740)
O2': (-37.669,12.900,-10.909)
N1: (-35.625,13.660,-7.968)
N3: (-33.243,13.791,-7.769)
N4: (-32.282,13.536,-5.662)
C6: (-35.730,13.463,-6.622)
C5: (-34.639,13.423,-5.843)
O3': (-38.457,10.538,-9.667)
OP1: (-40.055,11.344,-4.023)
OP2: (-37.797,12.408,-3.438)
C4: (-33.361,13.589,-6.452)
O5': (-38.473,12.069,-5.856)
C3': (-37.816,11.554,-8.904)
C1': (-36.856,13.707,-8.807)
O4': (-37.990,13.692,-7.955)
C5': (-39.404,12.024,-6.930)
P: (-38.970,12.305,-4.355)
O2: (-34.288,14.003,-9.741)
C4': (-38.790,12.509,-8.217)
C2': (-36.970,12.502,-9.740)
O2': (-37.669,12.900,-10.909)
N1: (-35.625,13.660,-7.968)
N3: (-33.243,13.791,-7.769)
N4: (-32.282,13.536,-5.662)
C6: (-35.730,13.463,-6.622)
C5: (-34.639,13.423,-5.843)
O3': (-38.457,10.538,-9.667)
OP1: (-21.494,16.784,-11.334)
OP2: (-22.879,16.095,-9.296)
C3': (-26.297,15.655,-13.298)
C1': (-26.979,13.675,-12.249)
C5': (-23.807,15.295,-12.883)
O6: (-30.790,14.427,-7.677)
O4': (-25.560,13.776,-12.195)
C8: (-26.988,14.211,-9.675)
C2: (-31.077,13.705,-11.124)
C6: (-30.414,14.208,-8.827)
C5: (-29.090,14.171,-9.331)
C4: (-28.915,13.900,-10.672)
P: (-22.526,15.909,-10.729)
C4': (-25.134,14.700,-13.224)
C2': (-27.465,14.692,-13.287)
O2': (-27.581,14.035,-14.540)
N1: (-31.359,13.960,-9.812)
N2: (-32.128,13.490,-11.930)
N3: (-29.853,13.663,-11.614)
N7: (-27.865,14.370,-8.704)
N9: (-27.559,13.928,-10.906)
O5': (-23.828,15.919,-11.622)
O3': (-26.257,16.502,-14.423)
OP2: (-22.879,16.095,-9.296)
C3': (-26.297,15.655,-13.298)
C1': (-26.979,13.675,-12.249)
C5': (-23.807,15.295,-12.883)
O6: (-30.790,14.427,-7.677)
O4': (-25.560,13.776,-12.195)
C8: (-26.988,14.211,-9.675)
C2: (-31.077,13.705,-11.124)
C6: (-30.414,14.208,-8.827)
C5: (-29.090,14.171,-9.331)
C4: (-28.915,13.900,-10.672)
P: (-22.526,15.909,-10.729)
C4': (-25.134,14.700,-13.224)
C2': (-27.465,14.692,-13.287)
O2': (-27.581,14.035,-14.540)
N1: (-31.359,13.960,-9.812)
N2: (-32.128,13.490,-11.930)
N3: (-29.853,13.663,-11.614)
N7: (-27.865,14.370,-8.704)
N9: (-27.559,13.928,-10.906)
O5': (-23.828,15.919,-11.622)
O3': (-26.257,16.502,-14.423)
Image (generated by PyMOL):