Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1658:1659
Extra
PDB:
ATOM 1 O3' U A 657 60.161 -73.155 85.101 1.00 49.71 O
ATOM 2 P G A 658 61.744 -73.138 85.349 1.00 46.01 P
ATOM 3 OP1 G A 658 62.266 -74.469 84.942 1.00 46.57 O
ATOM 4 OP2 G A 658 61.987 -72.672 86.745 1.00 46.02 O
ATOM 5 O5' G A 658 62.217 -72.019 84.325 1.00 45.50 O
ATOM 6 C5' G A 658 62.115 -72.196 82.921 1.00 45.41 C
ATOM 7 C4' G A 658 62.396 -70.903 82.216 1.00 44.86 C
ATOM 8 O4' G A 658 61.610 -69.876 82.845 1.00 44.43 O
ATOM 9 C3' G A 658 63.851 -70.403 82.291 1.00 44.86 C
ATOM 10 O3' G A 658 64.657 -70.894 81.213 1.00 45.05 O
ATOM 11 C2' G A 658 63.714 -68.882 82.295 1.00 44.26 C
ATOM 12 O2' G A 658 63.757 -68.373 80.984 1.00 43.94 O
ATOM 13 C1' G A 658 62.305 -68.656 82.867 1.00 44.05 C
ATOM 14 N9 G A 658 62.340 -68.188 84.250 1.00 44.03 N
ATOM 15 C8 G A 658 62.021 -68.940 85.344 1.00 44.40 C
ATOM 16 N7 G A 658 62.165 -68.275 86.448 1.00 44.30 N
ATOM 17 C5 G A 658 62.599 -67.036 86.030 1.00 43.85 C
ATOM 18 C6 G A 658 62.923 -65.924 86.807 1.00 43.59 C
ATOM 19 O6 G A 658 62.874 -65.859 88.028 1.00 43.72 O
ATOM 20 N1 G A 658 63.325 -64.850 86.018 1.00 43.15 N
ATOM 21 C2 G A 658 63.408 -64.892 84.641 1.00 43.01 C
ATOM 22 N2 G A 658 63.815 -63.765 84.072 1.00 42.60 N
ATOM 23 N3 G A 658 63.107 -65.944 83.884 1.00 43.26 N
ATOM 24 C4 G A 658 62.710 -66.959 84.667 1.00 43.67 C
ATOM 25 P A A 659 66.216 -71.267 81.420 1.00 51.35 P
ATOM 26 OP1 A A 659 66.335 -72.689 81.246 1.00 51.92 O
ATOM 27 OP2 A A 659 66.658 -70.682 82.687 1.00 51.31 O
ATOM 28 O5' A A 659 66.926 -70.510 80.221 1.00 51.04 O
TER
ATOM 1 O3' G B 658 64.657 -70.894 81.213 1.00 45.05 O
ATOM 2 P A B 659 66.216 -71.267 81.420 1.00 51.35 P
ATOM 3 OP1 A B 659 66.335 -72.689 81.246 1.00 51.92 O
ATOM 4 OP2 A B 659 66.658 -70.682 82.687 1.00 51.31 O
ATOM 5 O5' A B 659 66.926 -70.510 80.221 1.00 51.04 O
ATOM 6 C5' A B 659 67.468 -71.194 79.111 1.00 51.30 C
ATOM 7 C4' A B 659 67.186 -70.438 77.841 1.00 50.86 C
ATOM 8 O4' A B 659 66.229 -69.366 78.121 1.00 50.33 O
ATOM 9 C3' A B 659 68.328 -69.649 77.199 1.00 50.67 C
ATOM 10 O3' A B 659 69.462 -70.369 76.612 1.00 51.08 O
ATOM 11 C2' A B 659 67.551 -68.742 76.237 1.00 50.14 C
ATOM 12 O2' A B 659 67.096 -69.446 75.100 1.00 50.27 O
ATOM 13 C1' A B 659 66.339 -68.383 77.110 1.00 49.89 C
ATOM 14 N9 A B 659 66.508 -67.044 77.696 1.00 49.46 N
ATOM 15 C8 A B 659 67.664 -66.541 78.190 1.00 49.47 C
ATOM 16 N7 A B 659 67.677 -65.279 78.506 1.00 49.04 N
ATOM 17 C5 A B 659 66.422 -64.894 78.132 1.00 48.69 C
ATOM 18 C6 A B 659 65.823 -63.650 78.239 1.00 48.18 C
ATOM 19 N6 A B 659 66.497 -62.624 78.778 1.00 47.96 N
ATOM 20 N1 A B 659 64.541 -63.533 77.804 1.00 47.94 N
ATOM 21 C2 A B 659 63.956 -64.611 77.274 1.00 48.20 C
ATOM 22 N3 A B 659 64.428 -65.842 77.114 1.00 48.69 N
ATOM 23 C4 A B 659 65.686 -65.933 77.591 1.00 48.93 C
ATOM 24 P A B 660 69.428 -71.912 76.211 1.00 57.52 P
ATOM 25 OP1 A B 660 68.020 -72.326 76.175 1.00 57.48 O
ATOM 26 OP2 A B 660 70.363 -72.636 77.107 1.00 58.03 O
ATOM 27 O5' A B 660 69.974 -71.918 74.731 1.00 57.52 O
TER
ATOM 2 P G A 658 61.744 -73.138 85.349 1.00 46.01 P
ATOM 3 OP1 G A 658 62.266 -74.469 84.942 1.00 46.57 O
ATOM 4 OP2 G A 658 61.987 -72.672 86.745 1.00 46.02 O
ATOM 5 O5' G A 658 62.217 -72.019 84.325 1.00 45.50 O
ATOM 6 C5' G A 658 62.115 -72.196 82.921 1.00 45.41 C
ATOM 7 C4' G A 658 62.396 -70.903 82.216 1.00 44.86 C
ATOM 8 O4' G A 658 61.610 -69.876 82.845 1.00 44.43 O
ATOM 9 C3' G A 658 63.851 -70.403 82.291 1.00 44.86 C
ATOM 10 O3' G A 658 64.657 -70.894 81.213 1.00 45.05 O
ATOM 11 C2' G A 658 63.714 -68.882 82.295 1.00 44.26 C
ATOM 12 O2' G A 658 63.757 -68.373 80.984 1.00 43.94 O
ATOM 13 C1' G A 658 62.305 -68.656 82.867 1.00 44.05 C
ATOM 14 N9 G A 658 62.340 -68.188 84.250 1.00 44.03 N
ATOM 15 C8 G A 658 62.021 -68.940 85.344 1.00 44.40 C
ATOM 16 N7 G A 658 62.165 -68.275 86.448 1.00 44.30 N
ATOM 17 C5 G A 658 62.599 -67.036 86.030 1.00 43.85 C
ATOM 18 C6 G A 658 62.923 -65.924 86.807 1.00 43.59 C
ATOM 19 O6 G A 658 62.874 -65.859 88.028 1.00 43.72 O
ATOM 20 N1 G A 658 63.325 -64.850 86.018 1.00 43.15 N
ATOM 21 C2 G A 658 63.408 -64.892 84.641 1.00 43.01 C
ATOM 22 N2 G A 658 63.815 -63.765 84.072 1.00 42.60 N
ATOM 23 N3 G A 658 63.107 -65.944 83.884 1.00 43.26 N
ATOM 24 C4 G A 658 62.710 -66.959 84.667 1.00 43.67 C
ATOM 25 P A A 659 66.216 -71.267 81.420 1.00 51.35 P
ATOM 26 OP1 A A 659 66.335 -72.689 81.246 1.00 51.92 O
ATOM 27 OP2 A A 659 66.658 -70.682 82.687 1.00 51.31 O
ATOM 28 O5' A A 659 66.926 -70.510 80.221 1.00 51.04 O
TER
ATOM 1 O3' G B 658 64.657 -70.894 81.213 1.00 45.05 O
ATOM 2 P A B 659 66.216 -71.267 81.420 1.00 51.35 P
ATOM 3 OP1 A B 659 66.335 -72.689 81.246 1.00 51.92 O
ATOM 4 OP2 A B 659 66.658 -70.682 82.687 1.00 51.31 O
ATOM 5 O5' A B 659 66.926 -70.510 80.221 1.00 51.04 O
ATOM 6 C5' A B 659 67.468 -71.194 79.111 1.00 51.30 C
ATOM 7 C4' A B 659 67.186 -70.438 77.841 1.00 50.86 C
ATOM 8 O4' A B 659 66.229 -69.366 78.121 1.00 50.33 O
ATOM 9 C3' A B 659 68.328 -69.649 77.199 1.00 50.67 C
ATOM 10 O3' A B 659 69.462 -70.369 76.612 1.00 51.08 O
ATOM 11 C2' A B 659 67.551 -68.742 76.237 1.00 50.14 C
ATOM 12 O2' A B 659 67.096 -69.446 75.100 1.00 50.27 O
ATOM 13 C1' A B 659 66.339 -68.383 77.110 1.00 49.89 C
ATOM 14 N9 A B 659 66.508 -67.044 77.696 1.00 49.46 N
ATOM 15 C8 A B 659 67.664 -66.541 78.190 1.00 49.47 C
ATOM 16 N7 A B 659 67.677 -65.279 78.506 1.00 49.04 N
ATOM 17 C5 A B 659 66.422 -64.894 78.132 1.00 48.69 C
ATOM 18 C6 A B 659 65.823 -63.650 78.239 1.00 48.18 C
ATOM 19 N6 A B 659 66.497 -62.624 78.778 1.00 47.96 N
ATOM 20 N1 A B 659 64.541 -63.533 77.804 1.00 47.94 N
ATOM 21 C2 A B 659 63.956 -64.611 77.274 1.00 48.20 C
ATOM 22 N3 A B 659 64.428 -65.842 77.114 1.00 48.69 N
ATOM 23 C4 A B 659 65.686 -65.933 77.591 1.00 48.93 C
ATOM 24 P A B 660 69.428 -71.912 76.211 1.00 57.52 P
ATOM 25 OP1 A B 660 68.020 -72.326 76.175 1.00 57.48 O
ATOM 26 OP2 A B 660 70.363 -72.636 77.107 1.00 58.03 O
ATOM 27 O5' A B 660 69.974 -71.918 74.731 1.00 57.52 O
TER
Atoms:
OP1: (62.266,-74.469,84.942)
OP2: (61.987,-72.672,86.745)
C3': (63.851,-70.403,82.291)
C1': (62.305,-68.656,82.867)
C5': (62.115,-72.196,82.921)
O6: (62.874,-65.859,88.028)
O4': (61.610,-69.876,82.845)
C8: (62.021,-68.940,85.344)
C2: (63.408,-64.892,84.641)
C6: (62.923,-65.924,86.807)
C5: (62.599,-67.036,86.030)
C4: (62.710,-66.959,84.667)
P: (61.744,-73.138,85.349)
C4': (62.396,-70.903,82.216)
C2': (63.714,-68.882,82.295)
O2': (63.757,-68.373,80.984)
N1: (63.325,-64.850,86.018)
N2: (63.815,-63.765,84.072)
N3: (63.107,-65.944,83.884)
N7: (62.165,-68.275,86.448)
N9: (62.340,-68.188,84.250)
O5': (62.217,-72.019,84.325)
O3': (64.657,-70.894,81.213)
OP2: (61.987,-72.672,86.745)
C3': (63.851,-70.403,82.291)
C1': (62.305,-68.656,82.867)
C5': (62.115,-72.196,82.921)
O6: (62.874,-65.859,88.028)
O4': (61.610,-69.876,82.845)
C8: (62.021,-68.940,85.344)
C2: (63.408,-64.892,84.641)
C6: (62.923,-65.924,86.807)
C5: (62.599,-67.036,86.030)
C4: (62.710,-66.959,84.667)
P: (61.744,-73.138,85.349)
C4': (62.396,-70.903,82.216)
C2': (63.714,-68.882,82.295)
O2': (63.757,-68.373,80.984)
N1: (63.325,-64.850,86.018)
N2: (63.815,-63.765,84.072)
N3: (63.107,-65.944,83.884)
N7: (62.165,-68.275,86.448)
N9: (62.340,-68.188,84.250)
O5': (62.217,-72.019,84.325)
O3': (64.657,-70.894,81.213)
OP1: (66.335,-72.689,81.246)
OP2: (66.658,-70.682,82.687)
C3': (68.328,-69.649,77.199)
C1': (66.339,-68.383,77.110)
C5': (67.468,-71.194,79.111)
O4': (66.229,-69.366,78.121)
C8: (67.664,-66.541,78.190)
O2': (67.096,-69.446,75.100)
C6: (65.823,-63.650,78.239)
C5: (66.422,-64.894,78.132)
C4: (65.686,-65.933,77.591)
P: (66.216,-71.267,81.420)
C4': (67.186,-70.438,77.841)
C2': (67.551,-68.742,76.237)
C2: (63.956,-64.611,77.274)
N1: (64.541,-63.533,77.804)
N3: (64.428,-65.842,77.114)
N6: (66.497,-62.624,78.778)
N7: (67.677,-65.279,78.506)
N9: (66.508,-67.044,77.696)
O5': (66.926,-70.510,80.221)
O3': (69.462,-70.369,76.612)
OP2: (66.658,-70.682,82.687)
C3': (68.328,-69.649,77.199)
C1': (66.339,-68.383,77.110)
C5': (67.468,-71.194,79.111)
O4': (66.229,-69.366,78.121)
C8: (67.664,-66.541,78.190)
O2': (67.096,-69.446,75.100)
C6: (65.823,-63.650,78.239)
C5: (66.422,-64.894,78.132)
C4: (65.686,-65.933,77.591)
P: (66.216,-71.267,81.420)
C4': (67.186,-70.438,77.841)
C2': (67.551,-68.742,76.237)
C2: (63.956,-64.611,77.274)
N1: (64.541,-63.533,77.804)
N3: (64.428,-65.842,77.114)
N6: (66.497,-62.624,78.778)
N7: (67.677,-65.279,78.506)
N9: (66.508,-67.044,77.696)
O5': (66.926,-70.510,80.221)
O3': (69.462,-70.369,76.612)
Image (generated by PyMOL):