ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1429:A1500

Extra

PDB:
ATOM 1 O3' G A1428 -10.888 -14.329 13.949 1.00 34.87 O
ATOM 2 P G A1429 -11.246 -13.197 15.036 1.00 49.54 P
ATOM 3 OP1 G A1429 -12.525 -12.555 14.625 1.00 86.44 O
ATOM 4 OP2 G A1429 -10.055 -12.353 15.284 1.00 86.53 O
ATOM 5 O5' G A1429 -11.537 -14.063 16.332 1.00 29.38 O
ATOM 6 C5' G A1429 -12.562 -15.068 16.316 1.00 29.38 C
ATOM 7 C4' G A1429 -12.770 -15.594 17.701 1.00 29.38 C
ATOM 8 O4' G A1429 -11.656 -16.443 18.066 1.00 29.38 O
ATOM 9 C3' G A1429 -12.791 -14.490 18.743 1.00 29.38 C
ATOM 10 O3' G A1429 -14.097 -13.949 18.880 1.00 29.38 O
ATOM 11 C2' G A1429 -12.291 -15.191 19.996 1.00 29.38 C
ATOM 12 O2' G A1429 -13.341 -15.831 20.691 1.00 29.38 O
ATOM 13 C1' G A1429 -11.302 -16.210 19.417 1.00 29.38 C
ATOM 14 N9 G A1429 -9.928 -15.722 19.443 1.00 71.93 N
ATOM 15 C8 G A1429 -9.252 -15.079 18.431 1.00 71.92 C
ATOM 16 N7 G A1429 -8.039 -14.734 18.765 1.00 71.98 N
ATOM 17 C5 G A1429 -7.903 -15.181 20.072 1.00 72.06 C
ATOM 18 C6 G A1429 -6.809 -15.082 20.966 1.00 72.11 C
ATOM 19 O6 G A1429 -5.706 -14.556 20.778 1.00 72.10 O
ATOM 20 N1 G A1429 -7.098 -15.672 22.191 1.00 72.01 N
ATOM 21 C2 G A1429 -8.289 -16.278 22.514 1.00 72.01 C
ATOM 22 N2 G A1429 -8.376 -16.803 23.740 1.00 71.97 N
ATOM 23 N3 G A1429 -9.320 -16.368 21.694 1.00 72.11 N
ATOM 24 C4 G A1429 -9.059 -15.803 20.499 1.00 72.04 C
ATOM 25 P G A1430 -14.317 -12.648 19.776 1.00 36.52 P
ATOM 26 OP1 G A1430 -15.757 -12.335 19.809 1.00 47.86 O
ATOM 27 OP2 G A1430 -13.349 -11.595 19.346 1.00 47.84 O
ATOM 28 O5' G A1430 -13.934 -13.157 21.227 1.00 39.05 O
TER

ATOM 1 O3' A B1499 -15.809 -21.937 20.431 1.00 44.87 O
ATOM 2 P G B1500 -17.424 -21.835 20.449 1.00 40.23 P
ATOM 3 OP1 G B1500 -17.867 -22.751 21.544 1.00119.06 O
ATOM 4 OP2 G B1500 -18.020 -21.992 19.095 1.00119.08 O
ATOM 5 O5' G B1500 -17.692 -20.341 20.942 1.00 61.17 O
ATOM 6 C5' G B1500 -19.029 -19.807 20.979 1.00 61.17 C
ATOM 7 C4' G B1500 -19.005 -18.314 21.224 1.00 61.17 C
ATOM 8 O4' G B1500 -18.613 -18.035 22.595 1.00 61.17 O
ATOM 9 C3' G B1500 -18.098 -17.476 20.324 1.00 61.17 C
ATOM 10 O3' G B1500 -18.747 -16.248 20.014 1.00 61.17 O
ATOM 11 C2' G B1500 -16.918 -17.155 21.233 1.00 61.17 C
ATOM 12 O2' G B1500 -16.305 -15.924 20.915 1.00 61.17 O
ATOM 13 C1' G B1500 -17.601 -17.053 22.595 1.00 61.17 C
ATOM 14 N9 G B1500 -16.714 -17.275 23.732 1.00114.35 N
ATOM 15 C8 G B1500 -16.484 -16.403 24.769 1.00114.34 C
ATOM 16 N7 G B1500 -15.611 -16.848 25.629 1.00114.43 N
ATOM 17 C5 G B1500 -15.247 -18.093 25.137 1.00114.43 C
ATOM 18 C6 G B1500 -14.320 -19.049 25.640 1.00114.34 C
ATOM 19 O6 G B1500 -13.604 -18.977 26.652 1.00114.36 O
ATOM 20 N1 G B1500 -14.264 -20.180 24.830 1.00114.30 N
ATOM 21 C2 G B1500 -14.996 -20.368 23.682 1.00114.34 C
ATOM 22 N2 G B1500 -14.804 -21.531 23.044 1.00114.37 N
ATOM 23 N3 G B1500 -15.855 -19.483 23.199 1.00114.42 N
ATOM 24 C4 G B1500 -15.929 -18.378 23.971 1.00114.45 C
ATOM 25 P G B1501 -19.301 -15.989 18.529 1.00 49.27 P
ATOM 26 OP1 G B1501 -19.875 -14.614 18.506 1.00 48.05 O
ATOM 27 OP2 G B1501 -20.150 -17.145 18.156 1.00 48.47 O
ATOM 28 O5' G B1501 -18.014 -16.016 17.591 1.00 17.62 O
TER

Atoms:
OP1: (-12.525,-12.555,14.625)
OP2: (-10.055,-12.353,15.284)
C3': (-12.791,-14.490,18.743)
C1': (-11.302,-16.210,19.417)
C5': (-12.562,-15.068,16.316)
O6: (-5.706,-14.556,20.778)
O4': (-11.656,-16.443,18.066)
C8: (-9.252,-15.079,18.431)
C2: (-8.289,-16.278,22.514)
C6: (-6.809,-15.082,20.966)
C5: (-7.903,-15.181,20.072)
C4: (-9.059,-15.803,20.499)
P: (-11.246,-13.197,15.036)
C4': (-12.770,-15.594,17.701)
C2': (-12.291,-15.191,19.996)
O2': (-13.341,-15.831,20.691)
N1: (-7.098,-15.672,22.191)
N2: (-8.376,-16.803,23.740)
N3: (-9.320,-16.368,21.694)
N7: (-8.039,-14.734,18.765)
N9: (-9.928,-15.722,19.443)
O5': (-11.537,-14.063,16.332)
O3': (-14.097,-13.949,18.880)
OP1: (-17.867,-22.751,21.544)
OP2: (-18.020,-21.992,19.095)
C3': (-18.098,-17.476,20.324)
C1': (-17.601,-17.053,22.595)
C5': (-19.029,-19.807,20.979)
O6: (-13.604,-18.977,26.652)
O4': (-18.613,-18.035,22.595)
C8: (-16.484,-16.403,24.769)
C2: (-14.996,-20.368,23.682)
C6: (-14.320,-19.049,25.640)
C5: (-15.247,-18.093,25.137)
C4: (-15.929,-18.378,23.971)
P: (-17.424,-21.835,20.449)
C4': (-19.005,-18.314,21.224)
C2': (-16.918,-17.155,21.233)
O2': (-16.305,-15.924,20.915)
N1: (-14.264,-20.180,24.830)
N2: (-14.804,-21.531,23.044)
N3: (-15.855,-19.483,23.199)
N7: (-15.611,-16.848,25.629)
N9: (-16.714,-17.275,23.732)
O5': (-17.692,-20.341,20.942)
O3': (-18.747,-16.248,20.014)
Image (generated by PyMOL):
PyMOL image
show in jmol