Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1463:1465
Extra
PDB:
ATOM 1 O3' G A 462 65.551 -27.210 -9.589 1.00 61.64 O
ATOM 2 P A A 463 64.499 -28.426 -9.629 1.00 53.71 P
ATOM 3 OP1 A A 463 63.243 -27.924 -9.029 1.00 53.29 O
ATOM 4 OP2 A A 463 65.163 -29.607 -9.024 1.00 53.65 O
ATOM 5 O5' A A 463 64.293 -28.673 -11.184 1.00 54.47 O
ATOM 6 C5' A A 463 63.605 -27.739 -12.011 1.00 54.68 C
ATOM 7 C4' A A 463 64.079 -27.845 -13.443 1.00 55.41 C
ATOM 8 O4' A A 463 63.078 -27.263 -14.333 1.00 55.72 O
ATOM 9 C3' A A 463 65.369 -27.096 -13.741 1.00 55.51 C
ATOM 10 O3' A A 463 66.016 -27.681 -14.880 1.00 56.19 O
ATOM 11 C2' A A 463 64.821 -25.738 -14.133 1.00 55.48 C
ATOM 12 O2' A A 463 65.723 -24.908 -14.827 1.00 55.75 O
ATOM 13 C1' A A 463 63.652 -26.163 -15.008 1.00 55.92 C
ATOM 14 N9 A A 463 62.646 -25.132 -15.176 1.00 55.82 N
ATOM 15 C8 A A 463 62.207 -24.650 -16.361 1.00 56.33 C
ATOM 16 N7 A A 463 61.308 -23.698 -16.247 1.00 56.12 N
ATOM 17 C5 A A 463 61.200 -23.552 -14.888 1.00 55.41 C
ATOM 18 C6 A A 463 60.411 -22.690 -14.162 1.00 54.92 C
ATOM 19 N6 A A 463 59.607 -21.847 -14.826 1.00 55.13 N
ATOM 20 N1 A A 463 60.472 -22.749 -12.803 1.00 54.26 N
ATOM 21 C2 A A 463 61.300 -23.642 -12.287 1.00 54.15 C
ATOM 22 N3 A A 463 62.094 -24.516 -12.890 1.00 54.58 N
ATOM 23 C4 A A 463 62.001 -24.416 -14.209 1.00 55.21 C
ATOM 24 P U A 464 67.201 -28.742 -14.699 1.00 64.93 P
ATOM 25 OP1 U A 464 67.218 -29.574 -15.908 1.00 65.67 O
ATOM 26 OP2 U A 464 66.993 -29.392 -13.390 1.00 64.38 O
ATOM 27 O5' U A 464 68.510 -27.840 -14.659 1.00 64.85 O
TER
ATOM 1 O3' U B 464 71.599 -24.899 -14.387 1.00 64.50 O
ATOM 2 P A B 465 71.673 -23.644 -15.380 1.00 61.37 P
ATOM 3 OP1 A B 465 71.440 -24.155 -16.741 1.00 62.10 O
ATOM 4 OP2 A B 465 72.934 -22.927 -15.100 1.00 61.24 O
ATOM 5 O5' A B 465 70.448 -22.759 -14.919 1.00 60.94 O
ATOM 6 C5' A B 465 70.241 -22.473 -13.557 1.00 60.23 C
ATOM 7 C4' A B 465 68.790 -22.499 -13.235 1.00 59.97 C
ATOM 8 O4' A B 465 68.556 -21.836 -11.972 1.00 59.27 O
ATOM 9 C3' A B 465 67.887 -21.774 -14.214 1.00 60.30 C
ATOM 10 O3' A B 465 67.609 -22.561 -15.350 1.00 60.94 O
ATOM 11 C2' A B 465 66.680 -21.524 -13.358 1.00 59.79 C
ATOM 12 O2' A B 465 65.967 -22.736 -13.185 1.00 59.81 O
ATOM 13 C1' A B 465 67.339 -21.147 -12.026 1.00 59.14 C
ATOM 14 N9 A B 465 67.644 -19.720 -11.978 1.00 58.98 N
ATOM 15 C8 A B 465 68.878 -19.192 -12.208 1.00 59.11 C
ATOM 16 N7 A B 465 68.907 -17.892 -12.153 1.00 58.96 N
ATOM 17 C5 A B 465 67.597 -17.557 -11.882 1.00 58.72 C
ATOM 18 C6 A B 465 66.997 -16.313 -11.723 1.00 58.50 C
ATOM 19 N6 A B 465 67.730 -15.197 -11.818 1.00 58.50 N
ATOM 20 N1 A B 465 65.647 -16.301 -11.462 1.00 58.31 N
ATOM 21 C2 A B 465 64.970 -17.457 -11.381 1.00 58.33 C
ATOM 22 N3 A B 465 65.432 -18.696 -11.522 1.00 58.54 N
ATOM 23 C4 A B 465 66.776 -18.673 -11.771 1.00 58.73 C
ATOM 24 P A B 466 66.995 -21.933 -16.707 1.00 56.59 P
ATOM 25 OP1 A B 466 66.544 -23.083 -17.527 1.00 57.13 O
ATOM 26 OP2 A B 466 67.996 -21.002 -17.294 1.00 56.84 O
ATOM 27 O5' A B 466 65.750 -21.115 -16.190 1.00 56.17 O
TER
ATOM 2 P A A 463 64.499 -28.426 -9.629 1.00 53.71 P
ATOM 3 OP1 A A 463 63.243 -27.924 -9.029 1.00 53.29 O
ATOM 4 OP2 A A 463 65.163 -29.607 -9.024 1.00 53.65 O
ATOM 5 O5' A A 463 64.293 -28.673 -11.184 1.00 54.47 O
ATOM 6 C5' A A 463 63.605 -27.739 -12.011 1.00 54.68 C
ATOM 7 C4' A A 463 64.079 -27.845 -13.443 1.00 55.41 C
ATOM 8 O4' A A 463 63.078 -27.263 -14.333 1.00 55.72 O
ATOM 9 C3' A A 463 65.369 -27.096 -13.741 1.00 55.51 C
ATOM 10 O3' A A 463 66.016 -27.681 -14.880 1.00 56.19 O
ATOM 11 C2' A A 463 64.821 -25.738 -14.133 1.00 55.48 C
ATOM 12 O2' A A 463 65.723 -24.908 -14.827 1.00 55.75 O
ATOM 13 C1' A A 463 63.652 -26.163 -15.008 1.00 55.92 C
ATOM 14 N9 A A 463 62.646 -25.132 -15.176 1.00 55.82 N
ATOM 15 C8 A A 463 62.207 -24.650 -16.361 1.00 56.33 C
ATOM 16 N7 A A 463 61.308 -23.698 -16.247 1.00 56.12 N
ATOM 17 C5 A A 463 61.200 -23.552 -14.888 1.00 55.41 C
ATOM 18 C6 A A 463 60.411 -22.690 -14.162 1.00 54.92 C
ATOM 19 N6 A A 463 59.607 -21.847 -14.826 1.00 55.13 N
ATOM 20 N1 A A 463 60.472 -22.749 -12.803 1.00 54.26 N
ATOM 21 C2 A A 463 61.300 -23.642 -12.287 1.00 54.15 C
ATOM 22 N3 A A 463 62.094 -24.516 -12.890 1.00 54.58 N
ATOM 23 C4 A A 463 62.001 -24.416 -14.209 1.00 55.21 C
ATOM 24 P U A 464 67.201 -28.742 -14.699 1.00 64.93 P
ATOM 25 OP1 U A 464 67.218 -29.574 -15.908 1.00 65.67 O
ATOM 26 OP2 U A 464 66.993 -29.392 -13.390 1.00 64.38 O
ATOM 27 O5' U A 464 68.510 -27.840 -14.659 1.00 64.85 O
TER
ATOM 1 O3' U B 464 71.599 -24.899 -14.387 1.00 64.50 O
ATOM 2 P A B 465 71.673 -23.644 -15.380 1.00 61.37 P
ATOM 3 OP1 A B 465 71.440 -24.155 -16.741 1.00 62.10 O
ATOM 4 OP2 A B 465 72.934 -22.927 -15.100 1.00 61.24 O
ATOM 5 O5' A B 465 70.448 -22.759 -14.919 1.00 60.94 O
ATOM 6 C5' A B 465 70.241 -22.473 -13.557 1.00 60.23 C
ATOM 7 C4' A B 465 68.790 -22.499 -13.235 1.00 59.97 C
ATOM 8 O4' A B 465 68.556 -21.836 -11.972 1.00 59.27 O
ATOM 9 C3' A B 465 67.887 -21.774 -14.214 1.00 60.30 C
ATOM 10 O3' A B 465 67.609 -22.561 -15.350 1.00 60.94 O
ATOM 11 C2' A B 465 66.680 -21.524 -13.358 1.00 59.79 C
ATOM 12 O2' A B 465 65.967 -22.736 -13.185 1.00 59.81 O
ATOM 13 C1' A B 465 67.339 -21.147 -12.026 1.00 59.14 C
ATOM 14 N9 A B 465 67.644 -19.720 -11.978 1.00 58.98 N
ATOM 15 C8 A B 465 68.878 -19.192 -12.208 1.00 59.11 C
ATOM 16 N7 A B 465 68.907 -17.892 -12.153 1.00 58.96 N
ATOM 17 C5 A B 465 67.597 -17.557 -11.882 1.00 58.72 C
ATOM 18 C6 A B 465 66.997 -16.313 -11.723 1.00 58.50 C
ATOM 19 N6 A B 465 67.730 -15.197 -11.818 1.00 58.50 N
ATOM 20 N1 A B 465 65.647 -16.301 -11.462 1.00 58.31 N
ATOM 21 C2 A B 465 64.970 -17.457 -11.381 1.00 58.33 C
ATOM 22 N3 A B 465 65.432 -18.696 -11.522 1.00 58.54 N
ATOM 23 C4 A B 465 66.776 -18.673 -11.771 1.00 58.73 C
ATOM 24 P A B 466 66.995 -21.933 -16.707 1.00 56.59 P
ATOM 25 OP1 A B 466 66.544 -23.083 -17.527 1.00 57.13 O
ATOM 26 OP2 A B 466 67.996 -21.002 -17.294 1.00 56.84 O
ATOM 27 O5' A B 466 65.750 -21.115 -16.190 1.00 56.17 O
TER
Atoms:
OP1: (63.243,-27.924,-9.029)
OP2: (65.163,-29.607,-9.024)
C3': (65.369,-27.096,-13.741)
C1': (63.652,-26.163,-15.008)
C5': (63.605,-27.739,-12.011)
O4': (63.078,-27.263,-14.333)
C8: (62.207,-24.650,-16.361)
O2': (65.723,-24.908,-14.827)
C6: (60.411,-22.690,-14.162)
C5: (61.200,-23.552,-14.888)
C4: (62.001,-24.416,-14.209)
P: (64.499,-28.426,-9.629)
C4': (64.079,-27.845,-13.443)
C2': (64.821,-25.738,-14.133)
C2: (61.300,-23.642,-12.287)
N1: (60.472,-22.749,-12.803)
N3: (62.094,-24.516,-12.890)
N6: (59.607,-21.847,-14.826)
N7: (61.308,-23.698,-16.247)
N9: (62.646,-25.132,-15.176)
O5': (64.293,-28.673,-11.184)
O3': (66.016,-27.681,-14.880)
OP2: (65.163,-29.607,-9.024)
C3': (65.369,-27.096,-13.741)
C1': (63.652,-26.163,-15.008)
C5': (63.605,-27.739,-12.011)
O4': (63.078,-27.263,-14.333)
C8: (62.207,-24.650,-16.361)
O2': (65.723,-24.908,-14.827)
C6: (60.411,-22.690,-14.162)
C5: (61.200,-23.552,-14.888)
C4: (62.001,-24.416,-14.209)
P: (64.499,-28.426,-9.629)
C4': (64.079,-27.845,-13.443)
C2': (64.821,-25.738,-14.133)
C2: (61.300,-23.642,-12.287)
N1: (60.472,-22.749,-12.803)
N3: (62.094,-24.516,-12.890)
N6: (59.607,-21.847,-14.826)
N7: (61.308,-23.698,-16.247)
N9: (62.646,-25.132,-15.176)
O5': (64.293,-28.673,-11.184)
O3': (66.016,-27.681,-14.880)
OP1: (71.440,-24.155,-16.741)
OP2: (72.934,-22.927,-15.100)
C3': (67.887,-21.774,-14.214)
C1': (67.339,-21.147,-12.026)
C5': (70.241,-22.473,-13.557)
O4': (68.556,-21.836,-11.972)
C8: (68.878,-19.192,-12.208)
O2': (65.967,-22.736,-13.185)
C6: (66.997,-16.313,-11.723)
C5: (67.597,-17.557,-11.882)
C4: (66.776,-18.673,-11.771)
P: (71.673,-23.644,-15.380)
C4': (68.790,-22.499,-13.235)
C2': (66.680,-21.524,-13.358)
C2: (64.970,-17.457,-11.381)
N1: (65.647,-16.301,-11.462)
N3: (65.432,-18.696,-11.522)
N6: (67.730,-15.197,-11.818)
N7: (68.907,-17.892,-12.153)
N9: (67.644,-19.720,-11.978)
O5': (70.448,-22.759,-14.919)
O3': (67.609,-22.561,-15.350)
OP2: (72.934,-22.927,-15.100)
C3': (67.887,-21.774,-14.214)
C1': (67.339,-21.147,-12.026)
C5': (70.241,-22.473,-13.557)
O4': (68.556,-21.836,-11.972)
C8: (68.878,-19.192,-12.208)
O2': (65.967,-22.736,-13.185)
C6: (66.997,-16.313,-11.723)
C5: (67.597,-17.557,-11.882)
C4: (66.776,-18.673,-11.771)
P: (71.673,-23.644,-15.380)
C4': (68.790,-22.499,-13.235)
C2': (66.680,-21.524,-13.358)
C2: (64.970,-17.457,-11.381)
N1: (65.647,-16.301,-11.462)
N3: (65.432,-18.696,-11.522)
N6: (67.730,-15.197,-11.818)
N7: (68.907,-17.892,-12.153)
N9: (67.644,-19.720,-11.978)
O5': (70.448,-22.759,-14.919)
O3': (67.609,-22.561,-15.350)
Image (generated by PyMOL):