Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A44:A69
Extra
PDB:
ATOM 1 O3' A A 43 -9.710 -44.819 7.870 1.00 22.46 O
ATOM 2 P C A 44 -8.695 -43.631 8.166 1.00 21.60 P
ATOM 3 OP1 C A 44 -8.534 -42.864 6.918 1.00 23.05 O
ATOM 4 OP2 C A 44 -7.500 -44.179 8.858 1.00 21.79 O
ATOM 5 O5' C A 44 -9.526 -42.743 9.176 1.00 21.97 O
ATOM 6 C5' C A 44 -8.943 -42.293 10.369 1.00 21.73 C
ATOM 7 C4' C A 44 -9.986 -42.155 11.431 1.00 20.33 C
ATOM 8 O4' C A 44 -10.505 -43.452 11.797 1.00 19.09 O
ATOM 9 C3' C A 44 -9.358 -41.640 12.696 1.00 20.55 C
ATOM 10 O3' C A 44 -9.239 -40.250 12.621 1.00 20.01 O
ATOM 11 C2' C A 44 -10.254 -42.180 13.793 1.00 20.18 C
ATOM 12 O2' C A 44 -11.401 -41.389 14.037 1.00 22.84 O
ATOM 13 C1' C A 44 -10.637 -43.537 13.208 1.00 19.07 C
ATOM 14 N1 C A 44 -9.749 -44.608 13.693 1.00 17.65 N
ATOM 15 C2 C A 44 -9.929 -45.097 14.989 1.00 16.96 C
ATOM 16 O2 C A 44 -10.828 -44.617 15.694 1.00 15.58 O
ATOM 17 N3 C A 44 -9.116 -46.078 15.440 1.00 17.40 N
ATOM 18 C4 C A 44 -8.162 -46.574 14.651 1.00 17.67 C
ATOM 19 N4 C A 44 -7.394 -47.549 15.135 1.00 18.17 N
ATOM 20 C5 C A 44 -7.955 -46.093 13.329 1.00 16.54 C
ATOM 21 C6 C A 44 -8.759 -45.118 12.897 1.00 17.57 C
ATOM 22 P C A 45 -7.842 -39.585 12.985 1.00 21.20 P
ATOM 23 OP1 C A 45 -7.662 -38.357 12.191 1.00 22.73 O
ATOM 24 OP2 C A 45 -6.830 -40.660 12.890 1.00 22.53 O
ATOM 25 O5' C A 45 -8.048 -39.206 14.520 1.00 21.44 O
TER
ATOM 1 O3' G B 68 -5.496 -48.398 27.590 1.00 22.35 O
ATOM 2 P G B 69 -6.988 -48.979 27.427 1.00 22.88 P
ATOM 3 OP1 G B 69 -7.630 -49.022 28.759 1.00 25.06 O
ATOM 4 OP2 G B 69 -6.963 -50.194 26.590 1.00 23.22 O
ATOM 5 O5' G B 69 -7.713 -47.835 26.604 1.00 22.50 O
ATOM 6 C5' G B 69 -8.926 -48.078 25.905 1.00 21.34 C
ATOM 7 C4' G B 69 -9.337 -46.826 25.191 1.00 20.62 C
ATOM 8 O4' G B 69 -8.272 -46.420 24.295 1.00 21.02 O
ATOM 9 C3' G B 69 -10.550 -46.946 24.303 1.00 20.48 C
ATOM 10 O3' G B 69 -11.732 -46.789 25.047 1.00 21.32 O
ATOM 11 C2' G B 69 -10.342 -45.811 23.319 1.00 20.91 C
ATOM 12 O2' G B 69 -10.692 -44.565 23.880 1.00 21.66 O
ATOM 13 C1' G B 69 -8.828 -45.844 23.129 1.00 21.02 C
ATOM 14 N9 G B 69 -8.426 -46.637 21.966 1.00 21.23 N
ATOM 15 C8 G B 69 -7.687 -47.795 21.953 1.00 21.69 C
ATOM 16 N7 G B 69 -7.493 -48.265 20.749 1.00 23.37 N
ATOM 17 C5 G B 69 -8.146 -47.365 19.919 1.00 22.10 C
ATOM 18 C6 G B 69 -8.296 -47.354 18.514 1.00 22.94 C
ATOM 19 O6 G B 69 -7.881 -48.169 17.688 1.00 22.08 O
ATOM 20 N1 G B 69 -9.029 -46.256 18.089 1.00 23.59 N
ATOM 21 C2 G B 69 -9.563 -45.300 18.908 1.00 22.08 C
ATOM 22 N2 G B 69 -10.244 -44.317 18.312 1.00 22.74 N
ATOM 23 N3 G B 69 -9.441 -45.303 20.214 1.00 22.27 N
ATOM 24 C4 G B 69 -8.723 -46.356 20.652 1.00 21.55 C
ATOM 25 P G B 70 -13.032 -47.634 24.644 1.00 21.70 P
ATOM 26 OP1 G B 70 -14.167 -47.058 25.422 1.00 23.03 O
ATOM 27 OP2 G B 70 -12.693 -49.078 24.788 1.00 20.27 O
ATOM 28 O5' G B 70 -13.243 -47.284 23.104 1.00 20.22 O
TER
ATOM 2 P C A 44 -8.695 -43.631 8.166 1.00 21.60 P
ATOM 3 OP1 C A 44 -8.534 -42.864 6.918 1.00 23.05 O
ATOM 4 OP2 C A 44 -7.500 -44.179 8.858 1.00 21.79 O
ATOM 5 O5' C A 44 -9.526 -42.743 9.176 1.00 21.97 O
ATOM 6 C5' C A 44 -8.943 -42.293 10.369 1.00 21.73 C
ATOM 7 C4' C A 44 -9.986 -42.155 11.431 1.00 20.33 C
ATOM 8 O4' C A 44 -10.505 -43.452 11.797 1.00 19.09 O
ATOM 9 C3' C A 44 -9.358 -41.640 12.696 1.00 20.55 C
ATOM 10 O3' C A 44 -9.239 -40.250 12.621 1.00 20.01 O
ATOM 11 C2' C A 44 -10.254 -42.180 13.793 1.00 20.18 C
ATOM 12 O2' C A 44 -11.401 -41.389 14.037 1.00 22.84 O
ATOM 13 C1' C A 44 -10.637 -43.537 13.208 1.00 19.07 C
ATOM 14 N1 C A 44 -9.749 -44.608 13.693 1.00 17.65 N
ATOM 15 C2 C A 44 -9.929 -45.097 14.989 1.00 16.96 C
ATOM 16 O2 C A 44 -10.828 -44.617 15.694 1.00 15.58 O
ATOM 17 N3 C A 44 -9.116 -46.078 15.440 1.00 17.40 N
ATOM 18 C4 C A 44 -8.162 -46.574 14.651 1.00 17.67 C
ATOM 19 N4 C A 44 -7.394 -47.549 15.135 1.00 18.17 N
ATOM 20 C5 C A 44 -7.955 -46.093 13.329 1.00 16.54 C
ATOM 21 C6 C A 44 -8.759 -45.118 12.897 1.00 17.57 C
ATOM 22 P C A 45 -7.842 -39.585 12.985 1.00 21.20 P
ATOM 23 OP1 C A 45 -7.662 -38.357 12.191 1.00 22.73 O
ATOM 24 OP2 C A 45 -6.830 -40.660 12.890 1.00 22.53 O
ATOM 25 O5' C A 45 -8.048 -39.206 14.520 1.00 21.44 O
TER
ATOM 1 O3' G B 68 -5.496 -48.398 27.590 1.00 22.35 O
ATOM 2 P G B 69 -6.988 -48.979 27.427 1.00 22.88 P
ATOM 3 OP1 G B 69 -7.630 -49.022 28.759 1.00 25.06 O
ATOM 4 OP2 G B 69 -6.963 -50.194 26.590 1.00 23.22 O
ATOM 5 O5' G B 69 -7.713 -47.835 26.604 1.00 22.50 O
ATOM 6 C5' G B 69 -8.926 -48.078 25.905 1.00 21.34 C
ATOM 7 C4' G B 69 -9.337 -46.826 25.191 1.00 20.62 C
ATOM 8 O4' G B 69 -8.272 -46.420 24.295 1.00 21.02 O
ATOM 9 C3' G B 69 -10.550 -46.946 24.303 1.00 20.48 C
ATOM 10 O3' G B 69 -11.732 -46.789 25.047 1.00 21.32 O
ATOM 11 C2' G B 69 -10.342 -45.811 23.319 1.00 20.91 C
ATOM 12 O2' G B 69 -10.692 -44.565 23.880 1.00 21.66 O
ATOM 13 C1' G B 69 -8.828 -45.844 23.129 1.00 21.02 C
ATOM 14 N9 G B 69 -8.426 -46.637 21.966 1.00 21.23 N
ATOM 15 C8 G B 69 -7.687 -47.795 21.953 1.00 21.69 C
ATOM 16 N7 G B 69 -7.493 -48.265 20.749 1.00 23.37 N
ATOM 17 C5 G B 69 -8.146 -47.365 19.919 1.00 22.10 C
ATOM 18 C6 G B 69 -8.296 -47.354 18.514 1.00 22.94 C
ATOM 19 O6 G B 69 -7.881 -48.169 17.688 1.00 22.08 O
ATOM 20 N1 G B 69 -9.029 -46.256 18.089 1.00 23.59 N
ATOM 21 C2 G B 69 -9.563 -45.300 18.908 1.00 22.08 C
ATOM 22 N2 G B 69 -10.244 -44.317 18.312 1.00 22.74 N
ATOM 23 N3 G B 69 -9.441 -45.303 20.214 1.00 22.27 N
ATOM 24 C4 G B 69 -8.723 -46.356 20.652 1.00 21.55 C
ATOM 25 P G B 70 -13.032 -47.634 24.644 1.00 21.70 P
ATOM 26 OP1 G B 70 -14.167 -47.058 25.422 1.00 23.03 O
ATOM 27 OP2 G B 70 -12.693 -49.078 24.788 1.00 20.27 O
ATOM 28 O5' G B 70 -13.243 -47.284 23.104 1.00 20.22 O
TER
Atoms:
C2: (-9.929,-45.097,14.989)
OP1: (-8.534,-42.864,6.918)
OP2: (-7.500,-44.179,8.858)
C4: (-8.162,-46.574,14.651)
O5': (-9.526,-42.743,9.176)
C3': (-9.358,-41.640,12.696)
C1': (-10.637,-43.537,13.208)
O4': (-10.505,-43.452,11.797)
C5': (-8.943,-42.293,10.369)
P: (-8.695,-43.631,8.166)
O2: (-10.828,-44.617,15.694)
C4': (-9.986,-42.155,11.431)
C2': (-10.254,-42.180,13.793)
O2': (-11.401,-41.389,14.037)
N1: (-9.749,-44.608,13.693)
N3: (-9.116,-46.078,15.440)
N4: (-7.394,-47.549,15.135)
C6: (-8.759,-45.118,12.897)
C5: (-7.955,-46.093,13.329)
O3': (-9.239,-40.250,12.621)
OP1: (-8.534,-42.864,6.918)
OP2: (-7.500,-44.179,8.858)
C4: (-8.162,-46.574,14.651)
O5': (-9.526,-42.743,9.176)
C3': (-9.358,-41.640,12.696)
C1': (-10.637,-43.537,13.208)
O4': (-10.505,-43.452,11.797)
C5': (-8.943,-42.293,10.369)
P: (-8.695,-43.631,8.166)
O2: (-10.828,-44.617,15.694)
C4': (-9.986,-42.155,11.431)
C2': (-10.254,-42.180,13.793)
O2': (-11.401,-41.389,14.037)
N1: (-9.749,-44.608,13.693)
N3: (-9.116,-46.078,15.440)
N4: (-7.394,-47.549,15.135)
C6: (-8.759,-45.118,12.897)
C5: (-7.955,-46.093,13.329)
O3': (-9.239,-40.250,12.621)
OP1: (-7.630,-49.022,28.759)
OP2: (-6.963,-50.194,26.590)
C3': (-10.550,-46.946,24.303)
C1': (-8.828,-45.844,23.129)
C5': (-8.926,-48.078,25.905)
O6: (-7.881,-48.169,17.688)
O4': (-8.272,-46.420,24.295)
C8: (-7.687,-47.795,21.953)
C2: (-9.563,-45.300,18.908)
C6: (-8.296,-47.354,18.514)
C5: (-8.146,-47.365,19.919)
C4: (-8.723,-46.356,20.652)
P: (-6.988,-48.979,27.427)
C4': (-9.337,-46.826,25.191)
C2': (-10.342,-45.811,23.319)
O2': (-10.692,-44.565,23.880)
N1: (-9.029,-46.256,18.089)
N2: (-10.244,-44.317,18.312)
N3: (-9.441,-45.303,20.214)
N7: (-7.493,-48.265,20.749)
N9: (-8.426,-46.637,21.966)
O5': (-7.713,-47.835,26.604)
O3': (-11.732,-46.789,25.047)
OP2: (-6.963,-50.194,26.590)
C3': (-10.550,-46.946,24.303)
C1': (-8.828,-45.844,23.129)
C5': (-8.926,-48.078,25.905)
O6: (-7.881,-48.169,17.688)
O4': (-8.272,-46.420,24.295)
C8: (-7.687,-47.795,21.953)
C2: (-9.563,-45.300,18.908)
C6: (-8.296,-47.354,18.514)
C5: (-8.146,-47.365,19.919)
C4: (-8.723,-46.356,20.652)
P: (-6.988,-48.979,27.427)
C4': (-9.337,-46.826,25.191)
C2': (-10.342,-45.811,23.319)
O2': (-10.692,-44.565,23.880)
N1: (-9.029,-46.256,18.089)
N2: (-10.244,-44.317,18.312)
N3: (-9.441,-45.303,20.214)
N7: (-7.493,-48.265,20.749)
N9: (-8.426,-46.637,21.966)
O5': (-7.713,-47.835,26.604)
O3': (-11.732,-46.789,25.047)
Image (generated by PyMOL):