Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0240:0245
Extra
PDB:
ATOM 1 O3' C A 239 80.486 132.622 3.630 1.00 50.67 O
ATOM 2 P C A 240 79.698 133.840 2.951 1.00 50.34 P
ATOM 3 OP1 C A 240 78.519 134.185 3.791 1.00 49.20 O
ATOM 4 OP2 C A 240 79.499 133.499 1.517 1.00 50.94 O
ATOM 5 O5' C A 240 80.738 135.039 3.059 1.00 51.54 O
ATOM 6 C5' C A 240 81.063 135.612 4.337 1.00 52.18 C
ATOM 7 C4' C A 240 81.956 136.819 4.163 1.00 54.31 C
ATOM 8 O4' C A 240 83.247 136.408 3.641 1.00 54.52 O
ATOM 9 C3' C A 240 81.476 137.854 3.160 1.00 54.74 C
ATOM 10 O3' C A 240 80.499 138.721 3.706 1.00 55.68 O
ATOM 11 C2' C A 240 82.762 138.584 2.815 1.00 55.06 C
ATOM 12 O2' C A 240 83.153 139.501 3.817 1.00 55.08 O
ATOM 13 C1' C A 240 83.757 137.424 2.786 1.00 55.60 C
ATOM 14 N1 C A 240 83.943 136.863 1.434 1.00 56.86 N
ATOM 15 C2 C A 240 84.713 137.580 0.506 1.00 57.15 C
ATOM 16 O2 C A 240 85.191 138.679 0.839 1.00 58.07 O
ATOM 17 N3 C A 240 84.910 137.063 -0.730 1.00 57.60 N
ATOM 18 C4 C A 240 84.365 135.888 -1.058 1.00 57.90 C
ATOM 19 N4 C A 240 84.582 135.417 -2.290 1.00 57.44 N
ATOM 20 C5 C A 240 83.570 135.143 -0.137 1.00 57.90 C
ATOM 21 C6 C A 240 83.386 135.662 1.084 1.00 57.63 C
ATOM 22 P U A 241 79.372 139.336 2.744 1.00 58.63 P
ATOM 23 OP1 U A 241 78.507 140.227 3.574 1.00 58.62 O
ATOM 24 OP2 U A 241 78.751 138.230 1.959 1.00 57.96 O
ATOM 25 O5' U A 241 80.206 140.224 1.716 1.00 60.72 O
TER
ATOM 1 O3' C B 244 89.285 142.531 -10.047 1.00 74.50 O
ATOM 2 P G B 245 90.040 141.130 -9.809 1.00 76.04 P
ATOM 3 OP1 G B 245 91.250 141.108 -10.677 1.00 76.92 O
ATOM 4 OP2 G B 245 89.024 140.049 -9.934 1.00 76.56 O
ATOM 5 O5' G B 245 90.540 141.181 -8.294 1.00 74.96 O
ATOM 6 C5' G B 245 91.406 142.236 -7.835 1.00 71.44 C
ATOM 7 C4' G B 245 91.204 142.477 -6.355 1.00 69.71 C
ATOM 8 O4' G B 245 89.783 142.664 -6.091 1.00 69.20 O
ATOM 9 C3' G B 245 91.580 141.344 -5.413 1.00 67.52 C
ATOM 10 O3' G B 245 92.978 141.283 -5.152 1.00 66.15 O
ATOM 11 C2' G B 245 90.788 141.711 -4.168 1.00 67.60 C
ATOM 12 O2' G B 245 91.365 142.774 -3.439 1.00 66.17 O
ATOM 13 C1' G B 245 89.473 142.181 -4.790 1.00 68.87 C
ATOM 14 N9 G B 245 88.541 141.061 -4.905 1.00 69.94 N
ATOM 15 C8 G B 245 88.101 140.435 -6.050 1.00 70.52 C
ATOM 16 N7 G B 245 87.322 139.411 -5.808 1.00 71.50 N
ATOM 17 C5 G B 245 87.230 139.367 -4.420 1.00 70.43 C
ATOM 18 C6 G B 245 86.539 138.460 -3.562 1.00 69.03 C
ATOM 19 O6 G B 245 85.861 137.474 -3.867 1.00 69.53 O
ATOM 20 N1 G B 245 86.710 138.793 -2.223 1.00 68.58 N
ATOM 21 C2 G B 245 87.454 139.852 -1.758 1.00 68.64 C
ATOM 22 N2 G B 245 87.492 140.016 -0.432 1.00 68.54 N
ATOM 23 N3 G B 245 88.113 140.690 -2.537 1.00 69.83 N
ATOM 24 C4 G B 245 87.958 140.391 -3.848 1.00 70.47 C
ATOM 25 P G B 246 93.652 139.875 -4.745 1.00 65.52 P
ATOM 26 OP1 G B 246 95.127 140.056 -4.776 1.00 64.45 O
ATOM 27 OP2 G B 246 93.027 138.795 -5.564 1.00 64.13 O
ATOM 28 O5' G B 246 93.215 139.661 -3.226 1.00 65.34 O
TER
ATOM 2 P C A 240 79.698 133.840 2.951 1.00 50.34 P
ATOM 3 OP1 C A 240 78.519 134.185 3.791 1.00 49.20 O
ATOM 4 OP2 C A 240 79.499 133.499 1.517 1.00 50.94 O
ATOM 5 O5' C A 240 80.738 135.039 3.059 1.00 51.54 O
ATOM 6 C5' C A 240 81.063 135.612 4.337 1.00 52.18 C
ATOM 7 C4' C A 240 81.956 136.819 4.163 1.00 54.31 C
ATOM 8 O4' C A 240 83.247 136.408 3.641 1.00 54.52 O
ATOM 9 C3' C A 240 81.476 137.854 3.160 1.00 54.74 C
ATOM 10 O3' C A 240 80.499 138.721 3.706 1.00 55.68 O
ATOM 11 C2' C A 240 82.762 138.584 2.815 1.00 55.06 C
ATOM 12 O2' C A 240 83.153 139.501 3.817 1.00 55.08 O
ATOM 13 C1' C A 240 83.757 137.424 2.786 1.00 55.60 C
ATOM 14 N1 C A 240 83.943 136.863 1.434 1.00 56.86 N
ATOM 15 C2 C A 240 84.713 137.580 0.506 1.00 57.15 C
ATOM 16 O2 C A 240 85.191 138.679 0.839 1.00 58.07 O
ATOM 17 N3 C A 240 84.910 137.063 -0.730 1.00 57.60 N
ATOM 18 C4 C A 240 84.365 135.888 -1.058 1.00 57.90 C
ATOM 19 N4 C A 240 84.582 135.417 -2.290 1.00 57.44 N
ATOM 20 C5 C A 240 83.570 135.143 -0.137 1.00 57.90 C
ATOM 21 C6 C A 240 83.386 135.662 1.084 1.00 57.63 C
ATOM 22 P U A 241 79.372 139.336 2.744 1.00 58.63 P
ATOM 23 OP1 U A 241 78.507 140.227 3.574 1.00 58.62 O
ATOM 24 OP2 U A 241 78.751 138.230 1.959 1.00 57.96 O
ATOM 25 O5' U A 241 80.206 140.224 1.716 1.00 60.72 O
TER
ATOM 1 O3' C B 244 89.285 142.531 -10.047 1.00 74.50 O
ATOM 2 P G B 245 90.040 141.130 -9.809 1.00 76.04 P
ATOM 3 OP1 G B 245 91.250 141.108 -10.677 1.00 76.92 O
ATOM 4 OP2 G B 245 89.024 140.049 -9.934 1.00 76.56 O
ATOM 5 O5' G B 245 90.540 141.181 -8.294 1.00 74.96 O
ATOM 6 C5' G B 245 91.406 142.236 -7.835 1.00 71.44 C
ATOM 7 C4' G B 245 91.204 142.477 -6.355 1.00 69.71 C
ATOM 8 O4' G B 245 89.783 142.664 -6.091 1.00 69.20 O
ATOM 9 C3' G B 245 91.580 141.344 -5.413 1.00 67.52 C
ATOM 10 O3' G B 245 92.978 141.283 -5.152 1.00 66.15 O
ATOM 11 C2' G B 245 90.788 141.711 -4.168 1.00 67.60 C
ATOM 12 O2' G B 245 91.365 142.774 -3.439 1.00 66.17 O
ATOM 13 C1' G B 245 89.473 142.181 -4.790 1.00 68.87 C
ATOM 14 N9 G B 245 88.541 141.061 -4.905 1.00 69.94 N
ATOM 15 C8 G B 245 88.101 140.435 -6.050 1.00 70.52 C
ATOM 16 N7 G B 245 87.322 139.411 -5.808 1.00 71.50 N
ATOM 17 C5 G B 245 87.230 139.367 -4.420 1.00 70.43 C
ATOM 18 C6 G B 245 86.539 138.460 -3.562 1.00 69.03 C
ATOM 19 O6 G B 245 85.861 137.474 -3.867 1.00 69.53 O
ATOM 20 N1 G B 245 86.710 138.793 -2.223 1.00 68.58 N
ATOM 21 C2 G B 245 87.454 139.852 -1.758 1.00 68.64 C
ATOM 22 N2 G B 245 87.492 140.016 -0.432 1.00 68.54 N
ATOM 23 N3 G B 245 88.113 140.690 -2.537 1.00 69.83 N
ATOM 24 C4 G B 245 87.958 140.391 -3.848 1.00 70.47 C
ATOM 25 P G B 246 93.652 139.875 -4.745 1.00 65.52 P
ATOM 26 OP1 G B 246 95.127 140.056 -4.776 1.00 64.45 O
ATOM 27 OP2 G B 246 93.027 138.795 -5.564 1.00 64.13 O
ATOM 28 O5' G B 246 93.215 139.661 -3.226 1.00 65.34 O
TER
Atoms:
C2: (84.713,137.580,0.506)
OP1: (78.519,134.185,3.791)
OP2: (79.499,133.499,1.517)
C4: (84.365,135.888,-1.058)
O5': (80.738,135.039,3.059)
C3': (81.476,137.854,3.160)
C1': (83.757,137.424,2.786)
O4': (83.247,136.408,3.641)
C5': (81.063,135.612,4.337)
P: (79.698,133.840,2.951)
O2: (85.191,138.679,0.839)
C4': (81.956,136.819,4.163)
C2': (82.762,138.584,2.815)
O2': (83.153,139.501,3.817)
N1: (83.943,136.863,1.434)
N3: (84.910,137.063,-0.730)
N4: (84.582,135.417,-2.290)
C6: (83.386,135.662,1.084)
C5: (83.570,135.143,-0.137)
O3': (80.499,138.721,3.706)
OP1: (78.519,134.185,3.791)
OP2: (79.499,133.499,1.517)
C4: (84.365,135.888,-1.058)
O5': (80.738,135.039,3.059)
C3': (81.476,137.854,3.160)
C1': (83.757,137.424,2.786)
O4': (83.247,136.408,3.641)
C5': (81.063,135.612,4.337)
P: (79.698,133.840,2.951)
O2: (85.191,138.679,0.839)
C4': (81.956,136.819,4.163)
C2': (82.762,138.584,2.815)
O2': (83.153,139.501,3.817)
N1: (83.943,136.863,1.434)
N3: (84.910,137.063,-0.730)
N4: (84.582,135.417,-2.290)
C6: (83.386,135.662,1.084)
C5: (83.570,135.143,-0.137)
O3': (80.499,138.721,3.706)
OP1: (91.250,141.108,-10.677)
OP2: (89.024,140.049,-9.934)
C3': (91.580,141.344,-5.413)
C1': (89.473,142.181,-4.790)
C5': (91.406,142.236,-7.835)
O6: (85.861,137.474,-3.867)
O4': (89.783,142.664,-6.091)
C8: (88.101,140.435,-6.050)
C2: (87.454,139.852,-1.758)
C6: (86.539,138.460,-3.562)
C5: (87.230,139.367,-4.420)
C4: (87.958,140.391,-3.848)
P: (90.040,141.130,-9.809)
C4': (91.204,142.477,-6.355)
C2': (90.788,141.711,-4.168)
O2': (91.365,142.774,-3.439)
N1: (86.710,138.793,-2.223)
N2: (87.492,140.016,-0.432)
N3: (88.113,140.690,-2.537)
N7: (87.322,139.411,-5.808)
N9: (88.541,141.061,-4.905)
O5': (90.540,141.181,-8.294)
O3': (92.978,141.283,-5.152)
OP2: (89.024,140.049,-9.934)
C3': (91.580,141.344,-5.413)
C1': (89.473,142.181,-4.790)
C5': (91.406,142.236,-7.835)
O6: (85.861,137.474,-3.867)
O4': (89.783,142.664,-6.091)
C8: (88.101,140.435,-6.050)
C2: (87.454,139.852,-1.758)
C6: (86.539,138.460,-3.562)
C5: (87.230,139.367,-4.420)
C4: (87.958,140.391,-3.848)
P: (90.040,141.130,-9.809)
C4': (91.204,142.477,-6.355)
C2': (90.788,141.711,-4.168)
O2': (91.365,142.774,-3.439)
N1: (86.710,138.793,-2.223)
N2: (87.492,140.016,-0.432)
N3: (88.113,140.690,-2.537)
N7: (87.322,139.411,-5.808)
N9: (88.541,141.061,-4.905)
O5': (90.540,141.181,-8.294)
O3': (92.978,141.283,-5.152)
Image (generated by PyMOL):