ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L0U:A67:A4

Extra

PDB:
ATOM 1 O3' C A 66 16.397 -6.501 -0.967 1.00 78.37 O
ATOM 2 P C A 67 17.313 -5.743 0.102 1.00 77.65 P
ATOM 3 OP1 C A 67 16.571 -4.550 0.566 1.00 79.19 O
ATOM 4 OP2 C A 67 18.674 -5.597 -0.464 1.00 77.26 O
ATOM 5 O5' C A 67 17.393 -6.801 1.292 1.00 75.83 O
ATOM 6 C5' C A 67 16.255 -7.043 2.100 1.00 75.34 C
ATOM 7 C4' C A 67 16.598 -7.990 3.227 1.00 73.62 C
ATOM 8 O4' C A 67 17.086 -9.248 2.692 1.00 72.33 O
ATOM 9 C3' C A 67 17.723 -7.535 4.126 1.00 73.40 C
ATOM 10 O3' C A 67 17.299 -6.542 5.042 1.00 74.75 O
ATOM 11 C2' C A 67 18.107 -8.843 4.788 1.00 71.94 C
ATOM 12 O2' C A 67 17.213 -9.248 5.806 1.00 71.69 O
ATOM 13 C1' C A 67 18.053 -9.789 3.590 1.00 71.15 C
ATOM 14 N1 C A 67 19.386 -9.932 2.893 1.00 70.24 N
ATOM 15 C2 C A 67 20.414 -10.646 3.525 1.00 69.25 C
ATOM 16 O2 C A 67 20.209 -11.148 4.633 1.00 69.06 O
ATOM 17 N3 C A 67 21.612 -10.771 2.904 1.00 69.14 N
ATOM 18 C4 C A 67 21.807 -10.215 1.708 1.00 69.78 C
ATOM 19 N4 C A 67 23.006 -10.366 1.138 1.00 69.68 N
ATOM 20 C5 C A 67 20.778 -9.477 1.046 1.00 70.56 C
ATOM 21 C6 C A 67 19.598 -9.359 1.668 1.00 70.61 C
ATOM 22 P G A 68 18.303 -5.354 5.436 1.00 76.25 P
ATOM 23 OP1 G A 68 17.555 -4.389 6.274 1.00 77.46 O
ATOM 24 OP2 G A 68 18.982 -4.889 4.199 1.00 76.26 O
ATOM 25 O5' G A 68 19.384 -6.098 6.348 1.00 74.46 O
TER

ATOM 1 O3' C B 3 31.774 -15.859 6.119 1.00 75.42 O
ATOM 2 P G B 4 30.940 -17.112 5.577 1.00 75.02 P
ATOM 3 OP1 G B 4 31.574 -18.337 6.107 1.00 76.67 O
ATOM 4 OP2 G B 4 30.750 -16.954 4.118 1.00 74.80 O
ATOM 5 O5' G B 4 29.526 -16.912 6.283 1.00 73.28 O
ATOM 6 C5' G B 4 29.454 -16.894 7.696 1.00 73.46 C
ATOM 7 C4' G B 4 28.071 -16.502 8.173 1.00 72.24 C
ATOM 8 O4' G B 4 27.860 -15.086 7.949 1.00 71.56 O
ATOM 9 C3' G B 4 26.915 -17.169 7.453 1.00 71.34 C
ATOM 10 O3' G B 4 26.689 -18.480 7.950 1.00 72.39 O
ATOM 11 C2' G B 4 25.785 -16.205 7.766 1.00 70.01 C
ATOM 12 O2' G B 4 25.254 -16.370 9.061 1.00 70.25 O
ATOM 13 C1' G B 4 26.493 -14.859 7.635 1.00 70.11 C
ATOM 14 N9 G B 4 26.392 -14.290 6.294 1.00 69.18 N
ATOM 15 C8 G B 4 27.347 -14.297 5.304 1.00 69.27 C
ATOM 16 N7 G B 4 26.955 -13.719 4.204 1.00 68.80 N
ATOM 17 C5 G B 4 25.659 -13.310 4.479 1.00 67.99 C
ATOM 18 C6 G B 4 24.726 -12.626 3.665 1.00 67.67 C
ATOM 19 O6 G B 4 24.870 -12.235 2.499 1.00 68.27 O
ATOM 20 N1 G B 4 23.520 -12.408 4.332 1.00 67.03 N
ATOM 21 C2 G B 4 23.254 -12.803 5.627 1.00 66.92 C
ATOM 22 N2 G B 4 22.040 -12.506 6.108 1.00 66.81 N
ATOM 23 N3 G B 4 24.123 -13.439 6.398 1.00 67.28 N
ATOM 24 C4 G B 4 25.299 -13.659 5.760 1.00 68.00 C
ATOM 25 P G B 5 25.810 -19.520 7.113 1.00 72.40 P
ATOM 26 OP1 G B 5 25.841 -20.815 7.823 1.00 73.16 O
ATOM 27 OP2 G B 5 26.229 -19.442 5.692 1.00 72.47 O
ATOM 28 O5' G B 5 24.342 -18.908 7.242 1.00 71.31 O
TER

Atoms:
C2: (20.414,-10.646,3.525)
OP1: (16.571,-4.550,0.566)
OP2: (18.674,-5.597,-0.464)
C4: (21.807,-10.215,1.708)
O5': (17.393,-6.801,1.292)
C3': (17.723,-7.535,4.126)
C1': (18.053,-9.789,3.590)
O4': (17.086,-9.248,2.692)
C5': (16.255,-7.043,2.100)
P: (17.313,-5.743,0.102)
O2: (20.209,-11.148,4.633)
C4': (16.598,-7.990,3.227)
C2': (18.107,-8.843,4.788)
O2': (17.213,-9.248,5.806)
N1: (19.386,-9.932,2.893)
N3: (21.612,-10.771,2.904)
N4: (23.006,-10.366,1.138)
C6: (19.598,-9.359,1.668)
C5: (20.778,-9.477,1.046)
O3': (17.299,-6.542,5.042)
OP1: (31.574,-18.337,6.107)
OP2: (30.750,-16.954,4.118)
C3': (26.915,-17.169,7.453)
C1': (26.493,-14.859,7.635)
C5': (29.454,-16.894,7.696)
O6: (24.870,-12.235,2.499)
O4': (27.860,-15.086,7.949)
C8: (27.347,-14.297,5.304)
C2: (23.254,-12.803,5.627)
C6: (24.726,-12.626,3.665)
C5: (25.659,-13.310,4.479)
C4: (25.299,-13.659,5.760)
P: (30.940,-17.112,5.577)
C4': (28.071,-16.502,8.173)
C2': (25.785,-16.205,7.766)
O2': (25.254,-16.370,9.061)
N1: (23.520,-12.408,4.332)
N2: (22.040,-12.506,6.108)
N3: (24.123,-13.439,6.398)
N7: (26.955,-13.719,4.204)
N9: (26.392,-14.290,6.294)
O5': (29.526,-16.912,6.283)
O3': (26.689,-18.480,7.950)
Image (generated by PyMOL):
PyMOL image
show in jmol