ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0748:0633

Extra

PDB:
ATOM 1 O3' G A 747 55.467 110.126 61.984 1.00 36.17 O
ATOM 2 P A A 748 55.191 108.803 62.852 1.00 36.09 P
ATOM 3 OP1 A A 748 55.205 109.214 64.283 1.00 36.35 O
ATOM 4 OP2 A A 748 56.102 107.729 62.395 1.00 35.01 O
ATOM 5 O5' A A 748 53.709 108.397 62.445 1.00 34.03 O
ATOM 6 C5' A A 748 52.565 108.967 63.123 1.00 32.54 C
ATOM 7 C4' A A 748 51.313 108.228 62.720 1.00 33.49 C
ATOM 8 O4' A A 748 51.043 108.492 61.318 1.00 33.05 O
ATOM 9 C3' A A 748 51.395 106.710 62.852 1.00 32.09 C
ATOM 10 O3' A A 748 50.091 106.181 63.073 1.00 33.62 O
ATOM 11 C2' A A 748 51.927 106.307 61.475 1.00 33.41 C
ATOM 12 O2' A A 748 51.652 104.976 61.091 1.00 34.00 O
ATOM 13 C1' A A 748 51.210 107.307 60.560 1.00 33.93 C
ATOM 14 N9 A A 748 51.968 107.672 59.360 1.00 34.08 N
ATOM 15 C8 A A 748 53.325 107.558 59.163 1.00 37.04 C
ATOM 16 N7 A A 748 53.737 108.038 58.019 1.00 36.32 N
ATOM 17 C5 A A 748 52.574 108.485 57.411 1.00 36.60 C
ATOM 18 C6 A A 748 52.345 109.117 56.185 1.00 36.87 C
ATOM 19 N6 A A 748 53.321 109.451 55.344 1.00 36.90 N
ATOM 20 N1 A A 748 51.069 109.414 55.856 1.00 37.49 N
ATOM 21 C2 A A 748 50.097 109.111 56.729 1.00 37.54 C
ATOM 22 N3 A A 748 50.192 108.541 57.929 1.00 36.51 N
ATOM 23 C4 A A 748 51.473 108.246 58.214 1.00 34.83 C
ATOM 24 P C A 749 49.480 106.127 64.557 1.00 34.79 P
ATOM 25 OP1 C A 749 50.598 106.083 65.531 1.00 38.12 O
ATOM 26 OP2 C A 749 48.439 105.065 64.581 1.00 40.91 O
ATOM 27 O5' C A 749 48.715 107.507 64.750 1.00 33.71 O
TER

ATOM 1 O3' G B 632 41.554 107.801 61.560 1.00 41.59 O
ATOM 2 P U B 633 40.698 108.209 60.269 1.00 40.23 P
ATOM 3 OP1 U B 633 39.442 108.925 60.638 1.00 39.90 O
ATOM 4 OP2 U B 633 40.645 106.987 59.449 1.00 43.45 O
ATOM 5 O5' U B 633 41.669 109.218 59.521 1.00 44.02 O
ATOM 6 C5' U B 633 41.181 110.237 58.656 1.00 38.34 C
ATOM 7 C4' U B 633 42.287 110.659 57.727 1.00 40.64 C
ATOM 8 O4' U B 633 43.476 110.956 58.521 1.00 36.95 O
ATOM 9 C3' U B 633 42.767 109.574 56.777 1.00 38.95 C
ATOM 10 O3' U B 633 41.898 109.455 55.647 1.00 41.79 O
ATOM 11 C2' U B 633 44.176 110.054 56.441 1.00 38.52 C
ATOM 12 O2' U B 633 44.232 111.124 55.525 1.00 38.31 O
ATOM 13 C1' U B 633 44.639 110.592 57.792 1.00 36.38 C
ATOM 14 N1 U B 633 45.422 109.613 58.565 1.00 36.35 N
ATOM 15 C2 U B 633 46.705 109.328 58.117 1.00 36.42 C
ATOM 16 O2 U B 633 47.196 109.851 57.130 1.00 38.77 O
ATOM 17 N3 U B 633 47.393 108.407 58.865 1.00 34.51 N
ATOM 18 C4 U B 633 46.951 107.747 59.985 1.00 34.81 C
ATOM 19 O4 U B 633 47.699 106.935 60.537 1.00 36.76 O
ATOM 20 C5 U B 633 45.621 108.090 60.397 1.00 33.84 C
ATOM 21 C6 U B 633 44.918 108.989 59.691 1.00 36.05 C
ATOM 22 P G B 634 41.937 108.126 54.727 1.00 42.82 P
ATOM 23 OP1 G B 634 40.771 108.187 53.822 1.00 45.22 O
ATOM 24 OP2 G B 634 42.151 106.922 55.564 1.00 44.73 O
ATOM 25 O5' G B 634 43.227 108.322 53.816 1.00 43.00 O
TER

Atoms:
OP1: (55.205,109.214,64.283)
OP2: (56.102,107.729,62.395)
C3': (51.395,106.710,62.852)
C1': (51.210,107.307,60.560)
C5': (52.565,108.967,63.123)
O4': (51.043,108.492,61.318)
C8: (53.325,107.558,59.163)
O2': (51.652,104.976,61.091)
C6: (52.345,109.117,56.185)
C5: (52.574,108.485,57.411)
C4: (51.473,108.246,58.214)
P: (55.191,108.803,62.852)
C4': (51.313,108.228,62.720)
C2': (51.927,106.307,61.475)
C2: (50.097,109.111,56.729)
N1: (51.069,109.414,55.856)
N3: (50.192,108.541,57.929)
N6: (53.321,109.451,55.344)
N7: (53.737,108.038,58.019)
N9: (51.968,107.672,59.360)
O5': (53.709,108.397,62.445)
O3': (50.091,106.181,63.073)
C4: (46.951,107.747,59.985)
N3: (47.393,108.407,58.865)
OP1: (39.442,108.925,60.638)
OP2: (40.645,106.987,59.449)
C2: (46.705,109.328,58.117)
C1': (44.639,110.592,57.792)
C3': (42.767,109.574,56.777)
O5': (41.669,109.218,59.521)
O4': (43.476,110.956,58.521)
C5': (41.181,110.237,58.656)
P: (40.698,108.209,60.269)
C4': (42.287,110.659,57.727)
C2': (44.176,110.054,56.441)
O2': (44.232,111.124,55.525)
N1: (45.422,109.613,58.565)
O4: (47.699,106.935,60.537)
O2: (47.196,109.851,57.130)
C6: (44.918,108.989,59.691)
C5: (45.621,108.090,60.397)
O3': (41.898,109.455,55.647)
Image (generated by PyMOL):
PyMOL image
show in jmol