Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P4:P17
Extra
PDB:
ATOM 1 O3' A A 3 11.037 2.111 12.587 1.00 55.68 O
ATOM 2 P C A 4 10.588 3.564 12.070 1.00 55.56 P
ATOM 3 OP1 C A 4 11.594 4.544 12.538 1.00 55.59 O
ATOM 4 OP2 C A 4 9.157 3.780 12.394 1.00 54.86 O
ATOM 5 O5' C A 4 10.744 3.414 10.484 1.00 55.23 O
ATOM 6 C5' C A 4 12.029 3.262 9.880 1.00 54.23 C
ATOM 7 C4' C A 4 11.900 2.873 8.418 1.00 53.61 C
ATOM 8 O4' C A 4 11.106 1.665 8.308 1.00 53.54 O
ATOM 9 C3' C A 4 11.142 3.849 7.532 1.00 53.49 C
ATOM 10 O3' C A 4 11.947 4.962 7.144 1.00 53.41 O
ATOM 11 C2' C A 4 10.781 2.948 6.353 1.00 53.29 C
ATOM 12 O2' C A 4 11.856 2.743 5.455 1.00 53.45 O
ATOM 13 C1' C A 4 10.414 1.649 7.069 1.00 52.87 C
ATOM 14 N1 C A 4 8.933 1.500 7.300 1.00 51.99 N
ATOM 15 C2 C A 4 8.075 1.114 6.249 1.00 51.89 C
ATOM 16 O2 C A 4 8.528 0.885 5.119 1.00 51.95 O
ATOM 17 N3 C A 4 6.743 0.999 6.496 1.00 51.53 N
ATOM 18 C4 C A 4 6.260 1.246 7.716 1.00 51.24 C
ATOM 19 N4 C A 4 4.946 1.114 7.909 1.00 51.06 N
ATOM 20 C5 C A 4 7.106 1.638 8.795 1.00 51.53 C
ATOM 21 C6 C A 4 8.416 1.750 8.542 1.00 51.75 C
ATOM 22 P C A 5 11.269 6.391 6.873 1.00 53.00 P
ATOM 23 OP1 C A 5 12.357 7.324 6.505 1.00 53.22 O
ATOM 24 OP2 C A 5 10.395 6.714 8.025 1.00 52.91 O
ATOM 25 O5' C A 5 10.354 6.152 5.578 1.00 52.01 O
TER
ATOM 1 O3' G B 16 -3.005 -1.571 0.121 1.00 58.11 O
ATOM 2 P G B 17 -2.049 -2.827 0.407 1.00 57.75 P
ATOM 3 OP1 G B 17 -2.835 -4.065 0.204 1.00 57.80 O
ATOM 4 OP2 G B 17 -1.332 -2.618 1.689 1.00 57.57 O
ATOM 5 O5' G B 17 -1.015 -2.695 -0.799 1.00 56.68 O
ATOM 6 C5' G B 17 0.249 -3.293 -0.666 1.00 55.76 C
ATOM 7 C4' G B 17 1.365 -2.363 -1.091 1.00 55.03 C
ATOM 8 O4' G B 17 1.258 -1.063 -0.454 1.00 54.21 O
ATOM 9 C3' G B 17 2.728 -2.878 -0.670 1.00 55.06 C
ATOM 10 O3' G B 17 3.167 -3.848 -1.617 1.00 55.70 O
ATOM 11 C2' G B 17 3.558 -1.599 -0.654 1.00 54.21 C
ATOM 12 O2' G B 17 3.962 -1.189 -1.947 1.00 54.56 O
ATOM 13 C1' G B 17 2.549 -0.609 -0.069 1.00 53.13 C
ATOM 14 N9 G B 17 2.576 -0.467 1.394 1.00 51.20 N
ATOM 15 C8 G B 17 1.495 -0.602 2.234 1.00 50.66 C
ATOM 16 N7 G B 17 1.773 -0.420 3.492 1.00 49.86 N
ATOM 17 C5 G B 17 3.130 -0.139 3.497 1.00 49.35 C
ATOM 18 C6 G B 17 3.987 0.146 4.588 1.00 48.98 C
ATOM 19 O6 G B 17 3.691 0.203 5.789 1.00 48.39 O
ATOM 20 N1 G B 17 5.303 0.375 4.180 1.00 49.02 N
ATOM 21 C2 G B 17 5.731 0.333 2.872 1.00 49.21 C
ATOM 22 N2 G B 17 7.033 0.581 2.668 1.00 49.05 N
ATOM 23 N3 G B 17 4.932 0.067 1.839 1.00 49.44 N
ATOM 24 C4 G B 17 3.645 -0.160 2.217 1.00 49.88 C
ATOM 25 P U B 18 3.374 -5.368 -1.152 1.00 56.09 P
ATOM 26 OP1 U B 18 3.470 -6.207 -2.370 1.00 55.77 O
ATOM 27 OP2 U B 18 2.375 -5.705 -0.110 1.00 55.78 O
ATOM 28 O5' U B 18 4.817 -5.295 -0.468 1.00 55.55 O
TER
ATOM 2 P C A 4 10.588 3.564 12.070 1.00 55.56 P
ATOM 3 OP1 C A 4 11.594 4.544 12.538 1.00 55.59 O
ATOM 4 OP2 C A 4 9.157 3.780 12.394 1.00 54.86 O
ATOM 5 O5' C A 4 10.744 3.414 10.484 1.00 55.23 O
ATOM 6 C5' C A 4 12.029 3.262 9.880 1.00 54.23 C
ATOM 7 C4' C A 4 11.900 2.873 8.418 1.00 53.61 C
ATOM 8 O4' C A 4 11.106 1.665 8.308 1.00 53.54 O
ATOM 9 C3' C A 4 11.142 3.849 7.532 1.00 53.49 C
ATOM 10 O3' C A 4 11.947 4.962 7.144 1.00 53.41 O
ATOM 11 C2' C A 4 10.781 2.948 6.353 1.00 53.29 C
ATOM 12 O2' C A 4 11.856 2.743 5.455 1.00 53.45 O
ATOM 13 C1' C A 4 10.414 1.649 7.069 1.00 52.87 C
ATOM 14 N1 C A 4 8.933 1.500 7.300 1.00 51.99 N
ATOM 15 C2 C A 4 8.075 1.114 6.249 1.00 51.89 C
ATOM 16 O2 C A 4 8.528 0.885 5.119 1.00 51.95 O
ATOM 17 N3 C A 4 6.743 0.999 6.496 1.00 51.53 N
ATOM 18 C4 C A 4 6.260 1.246 7.716 1.00 51.24 C
ATOM 19 N4 C A 4 4.946 1.114 7.909 1.00 51.06 N
ATOM 20 C5 C A 4 7.106 1.638 8.795 1.00 51.53 C
ATOM 21 C6 C A 4 8.416 1.750 8.542 1.00 51.75 C
ATOM 22 P C A 5 11.269 6.391 6.873 1.00 53.00 P
ATOM 23 OP1 C A 5 12.357 7.324 6.505 1.00 53.22 O
ATOM 24 OP2 C A 5 10.395 6.714 8.025 1.00 52.91 O
ATOM 25 O5' C A 5 10.354 6.152 5.578 1.00 52.01 O
TER
ATOM 1 O3' G B 16 -3.005 -1.571 0.121 1.00 58.11 O
ATOM 2 P G B 17 -2.049 -2.827 0.407 1.00 57.75 P
ATOM 3 OP1 G B 17 -2.835 -4.065 0.204 1.00 57.80 O
ATOM 4 OP2 G B 17 -1.332 -2.618 1.689 1.00 57.57 O
ATOM 5 O5' G B 17 -1.015 -2.695 -0.799 1.00 56.68 O
ATOM 6 C5' G B 17 0.249 -3.293 -0.666 1.00 55.76 C
ATOM 7 C4' G B 17 1.365 -2.363 -1.091 1.00 55.03 C
ATOM 8 O4' G B 17 1.258 -1.063 -0.454 1.00 54.21 O
ATOM 9 C3' G B 17 2.728 -2.878 -0.670 1.00 55.06 C
ATOM 10 O3' G B 17 3.167 -3.848 -1.617 1.00 55.70 O
ATOM 11 C2' G B 17 3.558 -1.599 -0.654 1.00 54.21 C
ATOM 12 O2' G B 17 3.962 -1.189 -1.947 1.00 54.56 O
ATOM 13 C1' G B 17 2.549 -0.609 -0.069 1.00 53.13 C
ATOM 14 N9 G B 17 2.576 -0.467 1.394 1.00 51.20 N
ATOM 15 C8 G B 17 1.495 -0.602 2.234 1.00 50.66 C
ATOM 16 N7 G B 17 1.773 -0.420 3.492 1.00 49.86 N
ATOM 17 C5 G B 17 3.130 -0.139 3.497 1.00 49.35 C
ATOM 18 C6 G B 17 3.987 0.146 4.588 1.00 48.98 C
ATOM 19 O6 G B 17 3.691 0.203 5.789 1.00 48.39 O
ATOM 20 N1 G B 17 5.303 0.375 4.180 1.00 49.02 N
ATOM 21 C2 G B 17 5.731 0.333 2.872 1.00 49.21 C
ATOM 22 N2 G B 17 7.033 0.581 2.668 1.00 49.05 N
ATOM 23 N3 G B 17 4.932 0.067 1.839 1.00 49.44 N
ATOM 24 C4 G B 17 3.645 -0.160 2.217 1.00 49.88 C
ATOM 25 P U B 18 3.374 -5.368 -1.152 1.00 56.09 P
ATOM 26 OP1 U B 18 3.470 -6.207 -2.370 1.00 55.77 O
ATOM 27 OP2 U B 18 2.375 -5.705 -0.110 1.00 55.78 O
ATOM 28 O5' U B 18 4.817 -5.295 -0.468 1.00 55.55 O
TER
Atoms:
C2: (8.075,1.114,6.249)
OP1: (11.594,4.544,12.538)
OP2: (9.157,3.780,12.394)
C4: (6.260,1.246,7.716)
O5': (10.744,3.414,10.484)
C3': (11.142,3.849,7.532)
C1': (10.414,1.649,7.069)
O4': (11.106,1.665,8.308)
C5': (12.029,3.262,9.880)
P: (10.588,3.564,12.070)
O2: (8.528,0.885,5.119)
C4': (11.900,2.873,8.418)
C2': (10.781,2.948,6.353)
O2': (11.856,2.743,5.455)
N1: (8.933,1.500,7.300)
N3: (6.743,0.999,6.496)
N4: (4.946,1.114,7.909)
C6: (8.416,1.750,8.542)
C5: (7.106,1.638,8.795)
O3': (11.947,4.962,7.144)
OP1: (11.594,4.544,12.538)
OP2: (9.157,3.780,12.394)
C4: (6.260,1.246,7.716)
O5': (10.744,3.414,10.484)
C3': (11.142,3.849,7.532)
C1': (10.414,1.649,7.069)
O4': (11.106,1.665,8.308)
C5': (12.029,3.262,9.880)
P: (10.588,3.564,12.070)
O2: (8.528,0.885,5.119)
C4': (11.900,2.873,8.418)
C2': (10.781,2.948,6.353)
O2': (11.856,2.743,5.455)
N1: (8.933,1.500,7.300)
N3: (6.743,0.999,6.496)
N4: (4.946,1.114,7.909)
C6: (8.416,1.750,8.542)
C5: (7.106,1.638,8.795)
O3': (11.947,4.962,7.144)
OP1: (-2.835,-4.065,0.204)
OP2: (-1.332,-2.618,1.689)
C3': (2.728,-2.878,-0.670)
C1': (2.549,-0.609,-0.069)
C5': (0.249,-3.293,-0.666)
O6: (3.691,0.203,5.789)
O4': (1.258,-1.063,-0.454)
C8: (1.495,-0.602,2.234)
C2: (5.731,0.333,2.872)
C6: (3.987,0.146,4.588)
C5: (3.130,-0.139,3.497)
C4: (3.645,-0.160,2.217)
P: (-2.049,-2.827,0.407)
C4': (1.365,-2.363,-1.091)
C2': (3.558,-1.599,-0.654)
O2': (3.962,-1.189,-1.947)
N1: (5.303,0.375,4.180)
N2: (7.033,0.581,2.668)
N3: (4.932,0.067,1.839)
N7: (1.773,-0.420,3.492)
N9: (2.576,-0.467,1.394)
O5': (-1.015,-2.695,-0.799)
O3': (3.167,-3.848,-1.617)
OP2: (-1.332,-2.618,1.689)
C3': (2.728,-2.878,-0.670)
C1': (2.549,-0.609,-0.069)
C5': (0.249,-3.293,-0.666)
O6: (3.691,0.203,5.789)
O4': (1.258,-1.063,-0.454)
C8: (1.495,-0.602,2.234)
C2: (5.731,0.333,2.872)
C6: (3.987,0.146,4.588)
C5: (3.130,-0.139,3.497)
C4: (3.645,-0.160,2.217)
P: (-2.049,-2.827,0.407)
C4': (1.365,-2.363,-1.091)
C2': (3.558,-1.599,-0.654)
O2': (3.962,-1.189,-1.947)
N1: (5.303,0.375,4.180)
N2: (7.033,0.581,2.668)
N3: (4.932,0.067,1.839)
N7: (1.773,-0.420,3.492)
N9: (2.576,-0.467,1.394)
O5': (-1.015,-2.695,-0.799)
O3': (3.167,-3.848,-1.617)
Image (generated by PyMOL):