Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0286:0341
Extra
PDB:
ATOM 1 O3' U A 285 40.968 122.269 22.358 1.00 68.89 O
ATOM 2 P C A 286 39.967 123.356 22.986 1.00 67.56 P
ATOM 3 OP1 C A 286 39.426 122.786 24.247 1.00 69.16 O
ATOM 4 OP2 C A 286 39.028 123.811 21.930 1.00 68.75 O
ATOM 5 O5' C A 286 40.919 124.579 23.346 1.00 68.86 O
ATOM 6 C5' C A 286 41.997 124.432 24.291 1.00 68.61 C
ATOM 7 C4' C A 286 42.836 125.683 24.316 1.00 69.18 C
ATOM 8 O4' C A 286 43.535 125.826 23.046 1.00 69.67 O
ATOM 9 C3' C A 286 42.048 126.976 24.440 1.00 69.23 C
ATOM 10 O3' C A 286 41.657 127.271 25.771 1.00 68.63 O
ATOM 11 C2' C A 286 43.021 127.994 23.870 1.00 70.17 C
ATOM 12 O2' C A 286 44.040 128.336 24.789 1.00 68.90 O
ATOM 13 C1' C A 286 43.598 127.204 22.690 1.00 70.57 C
ATOM 14 N1 C A 286 42.807 127.413 21.453 1.00 71.14 N
ATOM 15 C2 C A 286 42.967 128.616 20.738 1.00 71.17 C
ATOM 16 O2 C A 286 43.785 129.458 21.146 1.00 71.43 O
ATOM 17 N3 C A 286 42.223 128.827 19.625 1.00 71.23 N
ATOM 18 C4 C A 286 41.353 127.900 19.215 1.00 69.86 C
ATOM 19 N4 C A 286 40.631 128.162 18.125 1.00 68.97 N
ATOM 20 C5 C A 286 41.182 126.666 19.909 1.00 69.97 C
ATOM 21 C6 C A 286 41.921 126.465 21.010 1.00 70.73 C
ATOM 22 P U A 287 40.301 128.100 26.032 1.00 67.50 P
ATOM 23 OP1 U A 287 40.095 128.140 27.506 1.00 67.35 O
ATOM 24 OP2 U A 287 39.242 127.528 25.156 1.00 66.38 O
ATOM 25 O5' U A 287 40.634 129.574 25.515 1.00 67.44 O
TER
ATOM 1 O3' A B 340 42.639 137.026 11.212 1.00 73.55 O
ATOM 2 P G B 341 43.907 136.057 10.988 1.00 74.01 P
ATOM 3 OP1 G B 341 44.840 136.763 10.073 1.00 75.40 O
ATOM 4 OP2 G B 341 43.441 134.686 10.650 1.00 74.46 O
ATOM 5 O5' G B 341 44.597 135.986 12.417 1.00 75.21 O
ATOM 6 C5' G B 341 45.155 137.161 13.026 1.00 74.65 C
ATOM 7 C4' G B 341 45.624 136.845 14.426 1.00 74.39 C
ATOM 8 O4' G B 341 44.483 136.490 15.253 1.00 74.33 O
ATOM 9 C3' G B 341 46.553 135.648 14.547 1.00 73.24 C
ATOM 10 O3' G B 341 47.897 135.985 14.234 1.00 72.58 O
ATOM 11 C2' G B 341 46.365 135.252 16.004 1.00 73.65 C
ATOM 12 O2' G B 341 47.072 136.094 16.895 1.00 73.20 O
ATOM 13 C1' G B 341 44.860 135.478 16.175 1.00 73.77 C
ATOM 14 N9 G B 341 44.076 134.277 15.893 1.00 73.58 N
ATOM 15 C8 G B 341 43.433 133.949 14.719 1.00 72.94 C
ATOM 16 N7 G B 341 42.818 132.799 14.775 1.00 72.59 N
ATOM 17 C5 G B 341 43.066 132.339 16.062 1.00 72.89 C
ATOM 18 C6 G B 341 42.658 131.142 16.706 1.00 72.21 C
ATOM 19 O6 G B 341 41.971 130.221 16.254 1.00 71.90 O
ATOM 20 N1 G B 341 43.136 131.075 18.012 1.00 72.62 N
ATOM 21 C2 G B 341 43.909 132.036 18.624 1.00 73.09 C
ATOM 22 N2 G B 341 44.274 131.793 19.892 1.00 71.36 N
ATOM 23 N3 G B 341 44.295 133.155 18.034 1.00 72.90 N
ATOM 24 C4 G B 341 43.842 133.240 16.764 1.00 73.29 C
ATOM 25 P A B 342 48.931 134.828 13.821 1.00 72.63 P
ATOM 26 OP1 A B 342 50.235 135.486 13.537 1.00 72.72 O
ATOM 27 OP2 A B 342 48.306 133.950 12.794 1.00 72.74 O
ATOM 28 O5' A B 342 49.098 133.978 15.154 1.00 72.47 O
TER
ATOM 2 P C A 286 39.967 123.356 22.986 1.00 67.56 P
ATOM 3 OP1 C A 286 39.426 122.786 24.247 1.00 69.16 O
ATOM 4 OP2 C A 286 39.028 123.811 21.930 1.00 68.75 O
ATOM 5 O5' C A 286 40.919 124.579 23.346 1.00 68.86 O
ATOM 6 C5' C A 286 41.997 124.432 24.291 1.00 68.61 C
ATOM 7 C4' C A 286 42.836 125.683 24.316 1.00 69.18 C
ATOM 8 O4' C A 286 43.535 125.826 23.046 1.00 69.67 O
ATOM 9 C3' C A 286 42.048 126.976 24.440 1.00 69.23 C
ATOM 10 O3' C A 286 41.657 127.271 25.771 1.00 68.63 O
ATOM 11 C2' C A 286 43.021 127.994 23.870 1.00 70.17 C
ATOM 12 O2' C A 286 44.040 128.336 24.789 1.00 68.90 O
ATOM 13 C1' C A 286 43.598 127.204 22.690 1.00 70.57 C
ATOM 14 N1 C A 286 42.807 127.413 21.453 1.00 71.14 N
ATOM 15 C2 C A 286 42.967 128.616 20.738 1.00 71.17 C
ATOM 16 O2 C A 286 43.785 129.458 21.146 1.00 71.43 O
ATOM 17 N3 C A 286 42.223 128.827 19.625 1.00 71.23 N
ATOM 18 C4 C A 286 41.353 127.900 19.215 1.00 69.86 C
ATOM 19 N4 C A 286 40.631 128.162 18.125 1.00 68.97 N
ATOM 20 C5 C A 286 41.182 126.666 19.909 1.00 69.97 C
ATOM 21 C6 C A 286 41.921 126.465 21.010 1.00 70.73 C
ATOM 22 P U A 287 40.301 128.100 26.032 1.00 67.50 P
ATOM 23 OP1 U A 287 40.095 128.140 27.506 1.00 67.35 O
ATOM 24 OP2 U A 287 39.242 127.528 25.156 1.00 66.38 O
ATOM 25 O5' U A 287 40.634 129.574 25.515 1.00 67.44 O
TER
ATOM 1 O3' A B 340 42.639 137.026 11.212 1.00 73.55 O
ATOM 2 P G B 341 43.907 136.057 10.988 1.00 74.01 P
ATOM 3 OP1 G B 341 44.840 136.763 10.073 1.00 75.40 O
ATOM 4 OP2 G B 341 43.441 134.686 10.650 1.00 74.46 O
ATOM 5 O5' G B 341 44.597 135.986 12.417 1.00 75.21 O
ATOM 6 C5' G B 341 45.155 137.161 13.026 1.00 74.65 C
ATOM 7 C4' G B 341 45.624 136.845 14.426 1.00 74.39 C
ATOM 8 O4' G B 341 44.483 136.490 15.253 1.00 74.33 O
ATOM 9 C3' G B 341 46.553 135.648 14.547 1.00 73.24 C
ATOM 10 O3' G B 341 47.897 135.985 14.234 1.00 72.58 O
ATOM 11 C2' G B 341 46.365 135.252 16.004 1.00 73.65 C
ATOM 12 O2' G B 341 47.072 136.094 16.895 1.00 73.20 O
ATOM 13 C1' G B 341 44.860 135.478 16.175 1.00 73.77 C
ATOM 14 N9 G B 341 44.076 134.277 15.893 1.00 73.58 N
ATOM 15 C8 G B 341 43.433 133.949 14.719 1.00 72.94 C
ATOM 16 N7 G B 341 42.818 132.799 14.775 1.00 72.59 N
ATOM 17 C5 G B 341 43.066 132.339 16.062 1.00 72.89 C
ATOM 18 C6 G B 341 42.658 131.142 16.706 1.00 72.21 C
ATOM 19 O6 G B 341 41.971 130.221 16.254 1.00 71.90 O
ATOM 20 N1 G B 341 43.136 131.075 18.012 1.00 72.62 N
ATOM 21 C2 G B 341 43.909 132.036 18.624 1.00 73.09 C
ATOM 22 N2 G B 341 44.274 131.793 19.892 1.00 71.36 N
ATOM 23 N3 G B 341 44.295 133.155 18.034 1.00 72.90 N
ATOM 24 C4 G B 341 43.842 133.240 16.764 1.00 73.29 C
ATOM 25 P A B 342 48.931 134.828 13.821 1.00 72.63 P
ATOM 26 OP1 A B 342 50.235 135.486 13.537 1.00 72.72 O
ATOM 27 OP2 A B 342 48.306 133.950 12.794 1.00 72.74 O
ATOM 28 O5' A B 342 49.098 133.978 15.154 1.00 72.47 O
TER
Atoms:
C2: (42.967,128.616,20.738)
OP1: (39.426,122.786,24.247)
OP2: (39.028,123.811,21.930)
C4: (41.353,127.900,19.215)
O5': (40.919,124.579,23.346)
C3': (42.048,126.976,24.440)
C1': (43.598,127.204,22.690)
O4': (43.535,125.826,23.046)
C5': (41.997,124.432,24.291)
P: (39.967,123.356,22.986)
O2: (43.785,129.458,21.146)
C4': (42.836,125.683,24.316)
C2': (43.021,127.994,23.870)
O2': (44.040,128.336,24.789)
N1: (42.807,127.413,21.453)
N3: (42.223,128.827,19.625)
N4: (40.631,128.162,18.125)
C6: (41.921,126.465,21.010)
C5: (41.182,126.666,19.909)
O3': (41.657,127.271,25.771)
OP1: (39.426,122.786,24.247)
OP2: (39.028,123.811,21.930)
C4: (41.353,127.900,19.215)
O5': (40.919,124.579,23.346)
C3': (42.048,126.976,24.440)
C1': (43.598,127.204,22.690)
O4': (43.535,125.826,23.046)
C5': (41.997,124.432,24.291)
P: (39.967,123.356,22.986)
O2: (43.785,129.458,21.146)
C4': (42.836,125.683,24.316)
C2': (43.021,127.994,23.870)
O2': (44.040,128.336,24.789)
N1: (42.807,127.413,21.453)
N3: (42.223,128.827,19.625)
N4: (40.631,128.162,18.125)
C6: (41.921,126.465,21.010)
C5: (41.182,126.666,19.909)
O3': (41.657,127.271,25.771)
OP1: (44.840,136.763,10.073)
OP2: (43.441,134.686,10.650)
C3': (46.553,135.648,14.547)
C1': (44.860,135.478,16.175)
C5': (45.155,137.161,13.026)
O6: (41.971,130.221,16.254)
O4': (44.483,136.490,15.253)
C8: (43.433,133.949,14.719)
C2: (43.909,132.036,18.624)
C6: (42.658,131.142,16.706)
C5: (43.066,132.339,16.062)
C4: (43.842,133.240,16.764)
P: (43.907,136.057,10.988)
C4': (45.624,136.845,14.426)
C2': (46.365,135.252,16.004)
O2': (47.072,136.094,16.895)
N1: (43.136,131.075,18.012)
N2: (44.274,131.793,19.892)
N3: (44.295,133.155,18.034)
N7: (42.818,132.799,14.775)
N9: (44.076,134.277,15.893)
O5': (44.597,135.986,12.417)
O3': (47.897,135.985,14.234)
OP2: (43.441,134.686,10.650)
C3': (46.553,135.648,14.547)
C1': (44.860,135.478,16.175)
C5': (45.155,137.161,13.026)
O6: (41.971,130.221,16.254)
O4': (44.483,136.490,15.253)
C8: (43.433,133.949,14.719)
C2: (43.909,132.036,18.624)
C6: (42.658,131.142,16.706)
C5: (43.066,132.339,16.062)
C4: (43.842,133.240,16.764)
P: (43.907,136.057,10.988)
C4': (45.624,136.845,14.426)
C2': (46.365,135.252,16.004)
O2': (47.072,136.094,16.895)
N1: (43.136,131.075,18.012)
N2: (44.274,131.793,19.892)
N3: (44.295,133.155,18.034)
N7: (42.818,132.799,14.775)
N9: (44.076,134.277,15.893)
O5': (44.597,135.986,12.417)
O3': (47.897,135.985,14.234)
Image (generated by PyMOL):