ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0748:0633

Extra

PDB:
ATOM 1 O3' G A 747 55.854 110.808 61.965 1.00 33.11 O
ATOM 2 P A A 748 55.616 109.507 62.869 1.00 32.90 P
ATOM 3 OP1 A A 748 55.688 110.009 64.273 1.00 32.49 O
ATOM 4 OP2 A A 748 56.555 108.447 62.408 1.00 29.14 O
ATOM 5 O5' A A 748 54.124 109.054 62.536 1.00 29.10 O
ATOM 6 C5' A A 748 52.986 109.707 63.154 1.00 31.33 C
ATOM 7 C4' A A 748 51.706 109.016 62.746 1.00 32.96 C
ATOM 8 O4' A A 748 51.445 109.249 61.335 1.00 33.46 O
ATOM 9 C3' A A 748 51.731 107.504 62.910 1.00 32.46 C
ATOM 10 O3' A A 748 50.403 107.029 63.097 1.00 32.65 O
ATOM 11 C2' A A 748 52.277 107.053 61.559 1.00 33.11 C
ATOM 12 O2' A A 748 51.936 105.720 61.254 1.00 34.95 O
ATOM 13 C1' A A 748 51.602 108.046 60.609 1.00 32.52 C
ATOM 14 N9 A A 748 52.354 108.385 59.399 1.00 34.59 N
ATOM 15 C8 A A 748 53.702 108.266 59.153 1.00 34.53 C
ATOM 16 N7 A A 748 54.070 108.741 57.987 1.00 33.55 N
ATOM 17 C5 A A 748 52.886 109.193 57.421 1.00 33.83 C
ATOM 18 C6 A A 748 52.602 109.829 56.203 1.00 33.64 C
ATOM 19 N6 A A 748 53.528 110.165 55.312 1.00 35.35 N
ATOM 20 N1 A A 748 51.318 110.127 55.935 1.00 33.86 N
ATOM 21 C2 A A 748 50.388 109.826 56.844 1.00 33.58 C
ATOM 22 N3 A A 748 50.527 109.254 58.031 1.00 34.56 N
ATOM 23 C4 A A 748 51.818 108.956 58.266 1.00 34.94 C
ATOM 24 P C A 749 49.792 106.895 64.577 1.00 30.36 P
ATOM 25 OP1 C A 749 50.893 106.780 65.548 1.00 35.35 O
ATOM 26 OP2 C A 749 48.770 105.824 64.499 1.00 36.48 O
ATOM 27 O5' C A 749 49.032 108.269 64.821 1.00 27.31 O
TER

ATOM 1 O3' G B 632 42.287 109.101 61.321 1.00 35.77 O
ATOM 2 P U B 633 41.088 108.813 60.301 1.00 35.42 P
ATOM 3 OP1 U B 633 39.839 109.496 60.739 1.00 34.89 O
ATOM 4 OP2 U B 633 41.094 107.354 60.098 1.00 36.81 O
ATOM 5 O5' U B 633 41.607 109.449 58.940 1.00 36.23 O
ATOM 6 C5' U B 633 41.468 110.850 58.649 1.00 35.53 C
ATOM 7 C4' U B 633 42.611 111.302 57.768 1.00 37.67 C
ATOM 8 O4' U B 633 43.788 111.544 58.581 1.00 37.44 O
ATOM 9 C3' U B 633 43.077 110.293 56.724 1.00 37.32 C
ATOM 10 O3' U B 633 42.232 110.303 55.572 1.00 37.36 O
ATOM 11 C2' U B 633 44.513 110.740 56.449 1.00 37.43 C
ATOM 12 O2' U B 633 44.651 111.815 55.545 1.00 36.34 O
ATOM 13 C1' U B 633 44.951 111.227 57.833 1.00 36.37 C
ATOM 14 N1 U B 633 45.755 110.249 58.580 1.00 37.01 N
ATOM 15 C2 U B 633 47.072 110.065 58.173 1.00 35.79 C
ATOM 16 O2 U B 633 47.569 110.664 57.229 1.00 34.29 O
ATOM 17 N3 U B 633 47.782 109.151 58.907 1.00 33.66 N
ATOM 18 C4 U B 633 47.331 108.419 59.978 1.00 32.63 C
ATOM 19 O4 U B 633 48.107 107.653 60.542 1.00 34.88 O
ATOM 20 C5 U B 633 45.965 108.655 60.339 1.00 32.95 C
ATOM 21 C6 U B 633 45.239 109.538 59.647 1.00 34.99 C
ATOM 22 P G B 634 42.154 109.011 54.606 1.00 39.16 P
ATOM 23 OP1 G B 634 40.945 109.218 53.762 1.00 37.84 O
ATOM 24 OP2 G B 634 42.299 107.754 55.377 1.00 36.73 O
ATOM 25 O5' G B 634 43.446 109.127 53.686 1.00 36.80 O
TER

Atoms:
OP1: (55.688,110.009,64.273)
OP2: (56.555,108.447,62.408)
C3': (51.731,107.504,62.910)
C1': (51.602,108.046,60.609)
C5': (52.986,109.707,63.154)
O4': (51.445,109.249,61.335)
C8: (53.702,108.266,59.153)
O2': (51.936,105.720,61.254)
C6: (52.602,109.829,56.203)
C5: (52.886,109.193,57.421)
C4: (51.818,108.956,58.266)
P: (55.616,109.507,62.869)
C4': (51.706,109.016,62.746)
C2': (52.277,107.053,61.559)
C2: (50.388,109.826,56.844)
N1: (51.318,110.127,55.935)
N3: (50.527,109.254,58.031)
N6: (53.528,110.165,55.312)
N7: (54.070,108.741,57.987)
N9: (52.354,108.385,59.399)
O5': (54.124,109.054,62.536)
O3': (50.403,107.029,63.097)
C4: (47.331,108.419,59.978)
N3: (47.782,109.151,58.907)
OP1: (39.839,109.496,60.739)
OP2: (41.094,107.354,60.098)
C2: (47.072,110.065,58.173)
C1': (44.951,111.227,57.833)
C3': (43.077,110.293,56.724)
O5': (41.607,109.449,58.940)
O4': (43.788,111.544,58.581)
C5': (41.468,110.850,58.649)
P: (41.088,108.813,60.301)
C4': (42.611,111.302,57.768)
C2': (44.513,110.740,56.449)
O2': (44.651,111.815,55.545)
N1: (45.755,110.249,58.580)
O4: (48.107,107.653,60.542)
O2: (47.569,110.664,57.229)
C6: (45.239,109.538,59.647)
C5: (45.965,108.655,60.339)
O3': (42.232,110.303,55.572)
Image (generated by PyMOL):
PyMOL image
show in jmol