Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E23:E9
Extra
PDB:
ATOM 1 O3' A A 22 -20.951 43.303 -11.499 1.00 31.32 O
ATOM 2 P C A 23 -20.542 42.950 -13.011 1.00 27.88 P
ATOM 3 OP1 C A 23 -21.286 43.882 -13.894 1.00 29.91 O
ATOM 4 OP2 C A 23 -20.689 41.485 -13.204 1.00 28.76 O
ATOM 5 O5' C A 23 -18.994 43.314 -13.082 1.00 27.11 O
ATOM 6 C5' C A 23 -18.567 44.671 -13.053 1.00 24.15 C
ATOM 7 C4' C A 23 -17.087 44.750 -12.769 1.00 24.03 C
ATOM 8 O4' C A 23 -16.823 44.212 -11.446 1.00 22.19 O
ATOM 9 C3' C A 23 -16.192 43.924 -13.676 1.00 24.64 C
ATOM 10 O3' C A 23 -15.921 44.591 -14.903 1.00 28.87 O
ATOM 11 C2' C A 23 -14.940 43.778 -12.823 1.00 22.51 C
ATOM 12 O2' C A 23 -14.122 44.931 -12.836 1.00 20.83 O
ATOM 13 C1' C A 23 -15.549 43.586 -11.434 1.00 22.31 C
ATOM 14 N1 C A 23 -15.726 42.162 -11.105 1.00 22.82 N
ATOM 15 C2 C A 23 -14.629 41.450 -10.614 1.00 21.47 C
ATOM 16 O2 C A 23 -13.551 42.046 -10.458 1.00 22.88 O
ATOM 17 N3 C A 23 -14.768 40.136 -10.323 1.00 18.82 N
ATOM 18 C4 C A 23 -15.945 39.534 -10.505 1.00 18.10 C
ATOM 19 N4 C A 23 -16.034 38.234 -10.209 1.00 13.77 N
ATOM 20 C5 C A 23 -17.083 40.238 -10.999 1.00 18.85 C
ATOM 21 C6 C A 23 -16.930 41.539 -11.283 1.00 21.10 C
ATOM 22 P G A 24 -15.707 43.732 -16.245 1.00 30.64 P
ATOM 23 OP1 G A 24 -15.311 44.657 -17.338 1.00 32.63 O
ATOM 24 OP2 G A 24 -16.901 42.866 -16.414 1.00 29.48 O
ATOM 25 O5' G A 24 -14.464 42.793 -15.908 1.00 30.51 O
TER
ATOM 1 O3' C B 8 -10.212 33.612 -4.650 1.00 18.09 O
ATOM 2 P G B 9 -8.620 33.607 -4.424 1.00 14.61 P
ATOM 3 OP1 G B 9 -8.116 32.269 -4.825 1.00 15.47 O
ATOM 4 OP2 G B 9 -8.341 34.117 -3.055 1.00 13.65 O
ATOM 5 O5' G B 9 -8.084 34.679 -5.473 1.00 14.73 O
ATOM 6 C5' G B 9 -6.694 34.977 -5.582 1.00 15.29 C
ATOM 7 C4' G B 9 -6.497 36.199 -6.447 1.00 16.06 C
ATOM 8 O4' G B 9 -7.067 35.937 -7.755 1.00 16.38 O
ATOM 9 C3' G B 9 -7.210 37.450 -5.957 1.00 17.36 C
ATOM 10 O3' G B 9 -6.379 38.171 -5.053 1.00 22.43 O
ATOM 11 C2' G B 9 -7.437 38.223 -7.248 1.00 16.37 C
ATOM 12 O2' G B 9 -6.285 38.922 -7.675 1.00 14.38 O
ATOM 13 C1' G B 9 -7.745 37.088 -8.225 1.00 16.39 C
ATOM 14 N9 G B 9 -9.165 36.764 -8.315 1.00 17.43 N
ATOM 15 C8 G B 9 -9.774 35.599 -7.913 1.00 16.24 C
ATOM 16 N7 G B 9 -11.063 35.596 -8.118 1.00 16.29 N
ATOM 17 C5 G B 9 -11.322 36.834 -8.689 1.00 18.18 C
ATOM 18 C6 G B 9 -12.543 37.405 -9.125 1.00 19.55 C
ATOM 19 O6 G B 9 -13.679 36.914 -9.092 1.00 22.07 O
ATOM 20 N1 G B 9 -12.353 38.683 -9.641 1.00 19.15 N
ATOM 21 C2 G B 9 -11.144 39.329 -9.727 1.00 20.09 C
ATOM 22 N2 G B 9 -11.165 40.562 -10.255 1.00 20.62 N
ATOM 23 N3 G B 9 -9.998 38.806 -9.325 1.00 19.24 N
ATOM 24 C4 G B 9 -10.160 37.566 -8.819 1.00 17.65 C
ATOM 25 P U B 10 -7.031 38.931 -3.796 1.00 22.91 P
ATOM 26 OP1 U B 10 -5.911 39.379 -2.934 1.00 24.96 O
ATOM 27 OP2 U B 10 -8.097 38.068 -3.227 1.00 23.16 O
ATOM 28 O5' U B 10 -7.708 40.224 -4.431 1.00 24.22 O
TER
ATOM 2 P C A 23 -20.542 42.950 -13.011 1.00 27.88 P
ATOM 3 OP1 C A 23 -21.286 43.882 -13.894 1.00 29.91 O
ATOM 4 OP2 C A 23 -20.689 41.485 -13.204 1.00 28.76 O
ATOM 5 O5' C A 23 -18.994 43.314 -13.082 1.00 27.11 O
ATOM 6 C5' C A 23 -18.567 44.671 -13.053 1.00 24.15 C
ATOM 7 C4' C A 23 -17.087 44.750 -12.769 1.00 24.03 C
ATOM 8 O4' C A 23 -16.823 44.212 -11.446 1.00 22.19 O
ATOM 9 C3' C A 23 -16.192 43.924 -13.676 1.00 24.64 C
ATOM 10 O3' C A 23 -15.921 44.591 -14.903 1.00 28.87 O
ATOM 11 C2' C A 23 -14.940 43.778 -12.823 1.00 22.51 C
ATOM 12 O2' C A 23 -14.122 44.931 -12.836 1.00 20.83 O
ATOM 13 C1' C A 23 -15.549 43.586 -11.434 1.00 22.31 C
ATOM 14 N1 C A 23 -15.726 42.162 -11.105 1.00 22.82 N
ATOM 15 C2 C A 23 -14.629 41.450 -10.614 1.00 21.47 C
ATOM 16 O2 C A 23 -13.551 42.046 -10.458 1.00 22.88 O
ATOM 17 N3 C A 23 -14.768 40.136 -10.323 1.00 18.82 N
ATOM 18 C4 C A 23 -15.945 39.534 -10.505 1.00 18.10 C
ATOM 19 N4 C A 23 -16.034 38.234 -10.209 1.00 13.77 N
ATOM 20 C5 C A 23 -17.083 40.238 -10.999 1.00 18.85 C
ATOM 21 C6 C A 23 -16.930 41.539 -11.283 1.00 21.10 C
ATOM 22 P G A 24 -15.707 43.732 -16.245 1.00 30.64 P
ATOM 23 OP1 G A 24 -15.311 44.657 -17.338 1.00 32.63 O
ATOM 24 OP2 G A 24 -16.901 42.866 -16.414 1.00 29.48 O
ATOM 25 O5' G A 24 -14.464 42.793 -15.908 1.00 30.51 O
TER
ATOM 1 O3' C B 8 -10.212 33.612 -4.650 1.00 18.09 O
ATOM 2 P G B 9 -8.620 33.607 -4.424 1.00 14.61 P
ATOM 3 OP1 G B 9 -8.116 32.269 -4.825 1.00 15.47 O
ATOM 4 OP2 G B 9 -8.341 34.117 -3.055 1.00 13.65 O
ATOM 5 O5' G B 9 -8.084 34.679 -5.473 1.00 14.73 O
ATOM 6 C5' G B 9 -6.694 34.977 -5.582 1.00 15.29 C
ATOM 7 C4' G B 9 -6.497 36.199 -6.447 1.00 16.06 C
ATOM 8 O4' G B 9 -7.067 35.937 -7.755 1.00 16.38 O
ATOM 9 C3' G B 9 -7.210 37.450 -5.957 1.00 17.36 C
ATOM 10 O3' G B 9 -6.379 38.171 -5.053 1.00 22.43 O
ATOM 11 C2' G B 9 -7.437 38.223 -7.248 1.00 16.37 C
ATOM 12 O2' G B 9 -6.285 38.922 -7.675 1.00 14.38 O
ATOM 13 C1' G B 9 -7.745 37.088 -8.225 1.00 16.39 C
ATOM 14 N9 G B 9 -9.165 36.764 -8.315 1.00 17.43 N
ATOM 15 C8 G B 9 -9.774 35.599 -7.913 1.00 16.24 C
ATOM 16 N7 G B 9 -11.063 35.596 -8.118 1.00 16.29 N
ATOM 17 C5 G B 9 -11.322 36.834 -8.689 1.00 18.18 C
ATOM 18 C6 G B 9 -12.543 37.405 -9.125 1.00 19.55 C
ATOM 19 O6 G B 9 -13.679 36.914 -9.092 1.00 22.07 O
ATOM 20 N1 G B 9 -12.353 38.683 -9.641 1.00 19.15 N
ATOM 21 C2 G B 9 -11.144 39.329 -9.727 1.00 20.09 C
ATOM 22 N2 G B 9 -11.165 40.562 -10.255 1.00 20.62 N
ATOM 23 N3 G B 9 -9.998 38.806 -9.325 1.00 19.24 N
ATOM 24 C4 G B 9 -10.160 37.566 -8.819 1.00 17.65 C
ATOM 25 P U B 10 -7.031 38.931 -3.796 1.00 22.91 P
ATOM 26 OP1 U B 10 -5.911 39.379 -2.934 1.00 24.96 O
ATOM 27 OP2 U B 10 -8.097 38.068 -3.227 1.00 23.16 O
ATOM 28 O5' U B 10 -7.708 40.224 -4.431 1.00 24.22 O
TER
Atoms:
C2: (-14.629,41.450,-10.614)
OP1: (-21.286,43.882,-13.894)
OP2: (-20.689,41.485,-13.204)
C4: (-15.945,39.534,-10.505)
O5': (-18.994,43.314,-13.082)
C3': (-16.192,43.924,-13.676)
C1': (-15.549,43.586,-11.434)
O4': (-16.823,44.212,-11.446)
C5': (-18.567,44.671,-13.053)
P: (-20.542,42.950,-13.011)
O2: (-13.551,42.046,-10.458)
C4': (-17.087,44.750,-12.769)
C2': (-14.940,43.778,-12.823)
O2': (-14.122,44.931,-12.836)
N1: (-15.726,42.162,-11.105)
N3: (-14.768,40.136,-10.323)
N4: (-16.034,38.234,-10.209)
C6: (-16.930,41.539,-11.283)
C5: (-17.083,40.238,-10.999)
O3': (-15.921,44.591,-14.903)
OP1: (-21.286,43.882,-13.894)
OP2: (-20.689,41.485,-13.204)
C4: (-15.945,39.534,-10.505)
O5': (-18.994,43.314,-13.082)
C3': (-16.192,43.924,-13.676)
C1': (-15.549,43.586,-11.434)
O4': (-16.823,44.212,-11.446)
C5': (-18.567,44.671,-13.053)
P: (-20.542,42.950,-13.011)
O2: (-13.551,42.046,-10.458)
C4': (-17.087,44.750,-12.769)
C2': (-14.940,43.778,-12.823)
O2': (-14.122,44.931,-12.836)
N1: (-15.726,42.162,-11.105)
N3: (-14.768,40.136,-10.323)
N4: (-16.034,38.234,-10.209)
C6: (-16.930,41.539,-11.283)
C5: (-17.083,40.238,-10.999)
O3': (-15.921,44.591,-14.903)
OP1: (-8.116,32.269,-4.825)
OP2: (-8.341,34.117,-3.055)
C3': (-7.210,37.450,-5.957)
C1': (-7.745,37.088,-8.225)
C5': (-6.694,34.977,-5.582)
O6: (-13.679,36.914,-9.092)
O4': (-7.067,35.937,-7.755)
C8: (-9.774,35.599,-7.913)
C2: (-11.144,39.329,-9.727)
C6: (-12.543,37.405,-9.125)
C5: (-11.322,36.834,-8.689)
C4: (-10.160,37.566,-8.819)
P: (-8.620,33.607,-4.424)
C4': (-6.497,36.199,-6.447)
C2': (-7.437,38.223,-7.248)
O2': (-6.285,38.922,-7.675)
N1: (-12.353,38.683,-9.641)
N2: (-11.165,40.562,-10.255)
N3: (-9.998,38.806,-9.325)
N7: (-11.063,35.596,-8.118)
N9: (-9.165,36.764,-8.315)
O5': (-8.084,34.679,-5.473)
O3': (-6.379,38.171,-5.053)
OP2: (-8.341,34.117,-3.055)
C3': (-7.210,37.450,-5.957)
C1': (-7.745,37.088,-8.225)
C5': (-6.694,34.977,-5.582)
O6: (-13.679,36.914,-9.092)
O4': (-7.067,35.937,-7.755)
C8: (-9.774,35.599,-7.913)
C2: (-11.144,39.329,-9.727)
C6: (-12.543,37.405,-9.125)
C5: (-11.322,36.834,-8.689)
C4: (-10.160,37.566,-8.819)
P: (-8.620,33.607,-4.424)
C4': (-6.497,36.199,-6.447)
C2': (-7.437,38.223,-7.248)
O2': (-6.285,38.922,-7.675)
N1: (-12.353,38.683,-9.641)
N2: (-11.165,40.562,-10.255)
N3: (-9.998,38.806,-9.325)
N7: (-11.063,35.596,-8.118)
N9: (-9.165,36.764,-8.315)
O5': (-8.084,34.679,-5.473)
O3': (-6.379,38.171,-5.053)
Image (generated by PyMOL):