ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0748:0633

Extra

PDB:
ATOM 1 O3' G A 747 55.909 110.867 62.009 1.00 27.06 O
ATOM 2 P A A 748 55.660 109.598 62.950 1.00 30.05 P
ATOM 3 OP1 A A 748 55.669 110.145 64.347 1.00 25.97 O
ATOM 4 OP2 A A 748 56.638 108.545 62.558 1.00 27.24 O
ATOM 5 O5' A A 748 54.193 109.097 62.556 1.00 26.68 O
ATOM 6 C5' A A 748 53.023 109.656 63.207 1.00 28.66 C
ATOM 7 C4' A A 748 51.771 108.924 62.781 1.00 28.03 C
ATOM 8 O4' A A 748 51.482 109.211 61.392 1.00 29.03 O
ATOM 9 C3' A A 748 51.822 107.410 62.890 1.00 28.36 C
ATOM 10 O3' A A 748 50.507 106.909 63.118 1.00 27.81 O
ATOM 11 C2' A A 748 52.326 107.013 61.508 1.00 28.72 C
ATOM 12 O2' A A 748 51.960 105.705 61.131 1.00 31.62 O
ATOM 13 C1' A A 748 51.628 108.040 60.617 1.00 28.16 C
ATOM 14 N9 A A 748 52.386 108.409 59.421 1.00 28.91 N
ATOM 15 C8 A A 748 53.739 108.306 59.206 1.00 28.79 C
ATOM 16 N7 A A 748 54.126 108.767 58.044 1.00 29.06 N
ATOM 17 C5 A A 748 52.950 109.203 57.451 1.00 29.31 C
ATOM 18 C6 A A 748 52.688 109.813 56.218 1.00 29.38 C
ATOM 19 N6 A A 748 53.635 110.134 55.342 1.00 31.04 N
ATOM 20 N1 A A 748 51.406 110.098 55.918 1.00 28.80 N
ATOM 21 C2 A A 748 50.460 109.808 56.815 1.00 27.54 C
ATOM 22 N3 A A 748 50.581 109.259 58.015 1.00 28.39 N
ATOM 23 C4 A A 748 51.868 108.973 58.278 1.00 28.92 C
ATOM 24 P C A 749 49.886 106.924 64.601 1.00 26.35 P
ATOM 25 OP1 C A 749 50.977 106.822 65.593 1.00 30.33 O
ATOM 26 OP2 C A 749 48.781 105.945 64.624 1.00 30.33 O
ATOM 27 O5' C A 749 49.217 108.355 64.739 1.00 24.13 O
TER

ATOM 1 O3' G B 632 42.309 108.944 61.366 1.00 29.05 O
ATOM 2 P U B 633 41.130 108.880 60.285 1.00 31.21 P
ATOM 3 OP1 U B 633 39.989 109.747 60.699 1.00 31.54 O
ATOM 4 OP2 U B 633 40.903 107.455 60.004 1.00 31.70 O
ATOM 5 O5' U B 633 41.793 109.498 58.978 1.00 31.79 O
ATOM 6 C5' U B 633 41.585 110.874 58.595 1.00 29.72 C
ATOM 7 C4' U B 633 42.743 111.345 57.750 1.00 30.36 C
ATOM 8 O4' U B 633 43.911 111.543 58.590 1.00 30.19 O
ATOM 9 C3' U B 633 43.210 110.341 56.706 1.00 31.03 C
ATOM 10 O3' U B 633 42.390 110.392 55.543 1.00 31.64 O
ATOM 11 C2' U B 633 44.661 110.753 56.459 1.00 30.01 C
ATOM 12 O2' U B 633 44.834 111.824 55.555 1.00 31.42 O
ATOM 13 C1' U B 633 45.083 111.229 57.851 1.00 29.53 C
ATOM 14 N1 U B 633 45.898 110.260 58.600 1.00 29.90 N
ATOM 15 C2 U B 633 47.185 110.026 58.135 1.00 30.02 C
ATOM 16 O2 U B 633 47.642 110.569 57.143 1.00 30.69 O
ATOM 17 N3 U B 633 47.915 109.130 58.874 1.00 27.84 N
ATOM 18 C4 U B 633 47.511 108.465 60.003 1.00 26.42 C
ATOM 19 O4 U B 633 48.328 107.783 60.612 1.00 28.71 O
ATOM 20 C5 U B 633 46.168 108.742 60.418 1.00 25.69 C
ATOM 21 C6 U B 633 45.425 109.606 59.723 1.00 27.68 C
ATOM 22 P G B 634 42.244 109.097 54.600 1.00 33.46 P
ATOM 23 OP1 G B 634 41.022 109.351 53.795 1.00 32.58 O
ATOM 24 OP2 G B 634 42.350 107.861 55.410 1.00 33.34 O
ATOM 25 O5' G B 634 43.509 109.150 53.639 1.00 30.61 O
TER

Atoms:
OP1: (55.669,110.145,64.347)
OP2: (56.638,108.545,62.558)
C3': (51.822,107.410,62.890)
C1': (51.628,108.040,60.617)
C5': (53.023,109.656,63.207)
O4': (51.482,109.211,61.392)
C8: (53.739,108.306,59.206)
O2': (51.960,105.705,61.131)
C6: (52.688,109.813,56.218)
C5: (52.950,109.203,57.451)
C4: (51.868,108.973,58.278)
P: (55.660,109.598,62.950)
C4': (51.771,108.924,62.781)
C2': (52.326,107.013,61.508)
C2: (50.460,109.808,56.815)
N1: (51.406,110.098,55.918)
N3: (50.581,109.259,58.015)
N6: (53.635,110.134,55.342)
N7: (54.126,108.767,58.044)
N9: (52.386,108.409,59.421)
O5': (54.193,109.097,62.556)
O3': (50.507,106.909,63.118)
C4: (47.511,108.465,60.003)
N3: (47.915,109.130,58.874)
OP1: (39.989,109.747,60.699)
OP2: (40.903,107.455,60.004)
C2: (47.185,110.026,58.135)
C1': (45.083,111.229,57.851)
C3': (43.210,110.341,56.706)
O5': (41.793,109.498,58.978)
O4': (43.911,111.543,58.590)
C5': (41.585,110.874,58.595)
P: (41.130,108.880,60.285)
C4': (42.743,111.345,57.750)
C2': (44.661,110.753,56.459)
O2': (44.834,111.824,55.555)
N1: (45.898,110.260,58.600)
O4: (48.328,107.783,60.612)
O2: (47.642,110.569,57.143)
C6: (45.425,109.606,59.723)
C5: (46.168,108.742,60.418)
O3': (42.390,110.392,55.543)
Image (generated by PyMOL):
PyMOL image
show in jmol