ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A693:A696

Extra

PDB:
ATOM 1 O3' G A 692 -49.080 -46.796 33.958 1.00 0.79 O
ATOM 2 P A A 693 -48.314 -45.404 33.880 1.00 1.06 P
ATOM 3 OP1 A A 693 -47.001 -45.586 33.230 1.00 1.06 O
ATOM 4 OP2 A A 693 -48.382 -44.823 35.249 1.00 1.06 O
ATOM 5 O5' A A 693 -49.216 -44.525 32.910 1.00 1.27 O
ATOM 6 C5' A A 693 -49.358 -44.884 31.544 1.00 1.27 C
ATOM 7 C4' A A 693 -49.064 -43.708 30.648 1.00 1.27 C
ATOM 8 O4' A A 693 -50.264 -42.915 30.456 1.00 1.27 O
ATOM 9 C3' A A 693 -47.952 -42.756 31.077 1.00 1.27 C
ATOM 10 O3' A A 693 -47.092 -42.398 30.005 1.00 1.27 O
ATOM 11 C2' A A 693 -48.715 -41.504 31.481 1.00 1.27 C
ATOM 12 O2' A A 693 -47.973 -40.348 31.192 1.00 1.27 O
ATOM 13 C1' A A 693 -49.927 -41.556 30.558 1.00 1.27 C
ATOM 14 N9 A A 693 -51.079 -40.803 31.042 1.00 0.79 N
ATOM 15 C8 A A 693 -51.251 -40.228 32.263 1.00 0.79 C
ATOM 16 N7 A A 693 -52.373 -39.570 32.380 1.00 0.79 N
ATOM 17 C5 A A 693 -52.983 -39.728 31.151 1.00 0.79 C
ATOM 18 C6 A A 693 -54.196 -39.258 30.635 1.00 0.79 C
ATOM 19 N6 A A 693 -55.023 -38.470 31.308 1.00 0.79 N
ATOM 20 N1 A A 693 -54.532 -39.618 29.384 1.00 0.79 N
ATOM 21 C2 A A 693 -53.687 -40.379 28.704 1.00 0.79 C
ATOM 22 N3 A A 693 -52.503 -40.865 29.072 1.00 0.79 N
ATOM 23 C4 A A 693 -52.209 -40.499 30.324 1.00 0.79 C
ATOM 24 P G A 694 -45.570 -42.913 30.022 1.00 9.70 P
ATOM 25 OP1 G A 694 -45.015 -42.655 31.367 1.00 9.70 O
ATOM 26 OP2 G A 694 -44.821 -42.439 28.821 1.00 9.70 O
ATOM 27 O5' G A 694 -45.782 -44.478 29.850 1.00 6.45 O
TER

ATOM 1 O3' C B 695 -48.502 -45.007 21.156 1.00 0.79 O
ATOM 2 P U B 696 -48.085 -43.501 20.827 1.00 0.79 P
ATOM 3 OP1 U B 696 -47.906 -43.474 19.354 1.00 0.79 O
ATOM 4 OP2 U B 696 -46.993 -43.025 21.712 1.00 0.79 O
ATOM 5 O5' U B 696 -49.428 -42.725 21.177 1.00 0.79 O
ATOM 6 C5' U B 696 -50.635 -43.051 20.471 1.00 0.79 C
ATOM 7 C4' U B 696 -51.822 -42.338 21.061 1.00 0.79 C
ATOM 8 O4' U B 696 -52.245 -42.993 22.273 1.00 0.79 O
ATOM 9 C3' U B 696 -51.604 -40.887 21.446 1.00 0.79 C
ATOM 10 O3' U B 696 -51.763 -40.025 20.337 1.00 0.79 O
ATOM 11 C2' U B 696 -52.690 -40.669 22.476 1.00 0.79 C
ATOM 12 O2' U B 696 -53.924 -40.492 21.842 1.00 0.79 O
ATOM 13 C1' U B 696 -52.712 -42.022 23.186 1.00 0.79 C
ATOM 14 N1 U B 696 -51.807 -42.001 24.341 1.00 12.06 N
ATOM 15 C2 U B 696 -52.304 -41.552 25.548 1.00 12.35 C
ATOM 16 O2 U B 696 -53.473 -41.211 25.703 1.00 12.48 O
ATOM 17 N3 U B 696 -51.383 -41.511 26.566 1.00 12.27 N
ATOM 18 C4 U B 696 -50.058 -41.863 26.496 1.00 12.06 C
ATOM 19 O4 U B 696 -49.333 -41.716 27.478 1.00 12.00 O
ATOM 20 C5 U B 696 -49.638 -42.333 25.226 1.00 12.17 C
ATOM 21 C6 U B 696 -50.502 -42.391 24.219 1.00 12.10 C
ATOM 22 P A B 697 -50.971 -38.624 20.293 1.00 1.74 P
ATOM 23 OP1 A B 697 -51.155 -38.123 18.902 1.00 1.74 O
ATOM 24 OP2 A B 697 -49.585 -38.728 20.871 1.00 1.74 O
ATOM 25 O5' A B 697 -51.809 -37.692 21.264 1.00 2.01 O
TER

Atoms:
OP1: (-47.001,-45.586,33.230)
OP2: (-48.382,-44.823,35.249)
C3': (-47.952,-42.756,31.077)
C1': (-49.927,-41.556,30.558)
C5': (-49.358,-44.884,31.544)
O4': (-50.264,-42.915,30.456)
C8: (-51.251,-40.228,32.263)
O2': (-47.973,-40.348,31.192)
C6: (-54.196,-39.258,30.635)
C5: (-52.983,-39.728,31.151)
C4: (-52.209,-40.499,30.324)
P: (-48.314,-45.404,33.880)
C4': (-49.064,-43.708,30.648)
C2': (-48.715,-41.504,31.481)
C2: (-53.687,-40.379,28.704)
N1: (-54.532,-39.618,29.384)
N3: (-52.503,-40.865,29.072)
N6: (-55.023,-38.470,31.308)
N7: (-52.373,-39.570,32.380)
N9: (-51.079,-40.803,31.042)
O5': (-49.216,-44.525,32.910)
O3': (-47.092,-42.398,30.005)
C4: (-50.058,-41.863,26.496)
N3: (-51.383,-41.511,26.566)
OP1: (-47.906,-43.474,19.354)
OP2: (-46.993,-43.025,21.712)
C2: (-52.304,-41.552,25.548)
C1': (-52.712,-42.022,23.186)
C3': (-51.604,-40.887,21.446)
O5': (-49.428,-42.725,21.177)
O4': (-52.245,-42.993,22.273)
C5': (-50.635,-43.051,20.471)
P: (-48.085,-43.501,20.827)
C4': (-51.822,-42.338,21.061)
C2': (-52.690,-40.669,22.476)
O2': (-53.924,-40.492,21.842)
N1: (-51.807,-42.001,24.341)
O4: (-49.333,-41.716,27.478)
O2: (-53.473,-41.211,25.703)
C6: (-50.502,-42.391,24.219)
C5: (-49.638,-42.333,25.226)
O3': (-51.763,-40.025,20.337)
Image (generated by PyMOL):
PyMOL image
show in jmol