ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:H9:S49

Extra

PDB:
ATOM 1 O3' G A 8 12.934 45.517 97.991 1.00 74.82 O
ATOM 2 P A A 9 13.744 46.892 97.840 1.00 75.06 P
ATOM 3 OP1 A A 9 13.140 47.859 98.782 1.00 75.29 O
ATOM 4 OP2 A A 9 13.835 47.236 96.402 1.00 75.12 O
ATOM 5 O5' A A 9 15.216 46.531 98.349 1.00 74.68 O
ATOM 6 C5' A A 9 15.438 45.908 99.611 1.00 74.55 C
ATOM 7 C4' A A 9 16.830 45.306 99.666 1.00 74.48 C
ATOM 8 O4' A A 9 16.901 44.095 98.867 1.00 74.36 O
ATOM 9 C3' A A 9 17.915 46.189 99.073 1.00 74.51 C
ATOM 10 O3' A A 9 18.328 47.170 100.013 1.00 74.75 O
ATOM 11 C2' A A 9 19.002 45.170 98.749 1.00 74.10 C
ATOM 12 O2' A A 9 19.764 44.797 99.880 1.00 74.05 O
ATOM 13 C1' A A 9 18.173 43.995 98.243 1.00 73.82 C
ATOM 14 N9 A A 9 18.010 43.993 96.787 1.00 73.33 N
ATOM 15 C8 A A 9 16.951 44.496 96.084 1.00 73.33 C
ATOM 16 N7 A A 9 17.059 44.366 94.785 1.00 73.38 N
ATOM 17 C5 A A 9 18.276 43.733 94.614 1.00 73.01 C
ATOM 18 C6 A A 9 18.971 43.308 93.460 1.00 72.76 C
ATOM 19 N6 A A 9 18.504 43.474 92.218 1.00 72.40 N
ATOM 20 N1 A A 9 20.170 42.706 93.631 1.00 72.80 N
ATOM 21 C2 A A 9 20.637 42.539 94.877 1.00 73.05 C
ATOM 22 N3 A A 9 20.073 42.894 96.036 1.00 73.36 N
ATOM 23 C4 A A 9 18.880 43.494 95.838 1.00 73.24 C
ATOM 24 P A A 10 18.731 48.629 99.497 1.00 74.61 P
ATOM 25 OP1 A A 10 18.917 49.477 100.697 1.00 74.75 O
ATOM 26 OP2 A A 10 17.765 49.033 98.449 1.00 74.56 O
ATOM 27 O5' A A 10 20.148 48.384 98.792 1.00 74.08 O
TER

ATOM 1 O3' U B 48 28.571 39.763 100.869 1.00 74.20 O
ATOM 2 P U B 49 27.746 38.387 101.025 1.00 74.86 P
ATOM 3 OP1 U B 49 26.334 38.737 101.317 1.00 74.65 O
ATOM 4 OP2 U B 49 28.488 37.503 101.956 1.00 74.49 O
ATOM 5 O5' U B 49 27.825 37.736 99.557 1.00 73.97 O
ATOM 6 C5' U B 49 27.073 36.571 99.208 1.00 72.24 C
ATOM 7 C4' U B 49 26.006 36.901 98.173 1.00 70.90 C
ATOM 8 O4' U B 49 25.047 37.856 98.705 1.00 71.61 O
ATOM 9 C3' U B 49 26.495 37.498 96.851 1.00 69.43 C
ATOM 10 O3' U B 49 25.956 36.715 95.789 1.00 65.86 O
ATOM 11 C2' U B 49 25.922 38.920 96.873 1.00 70.60 C
ATOM 12 O2' U B 49 25.664 39.461 95.590 1.00 70.51 O
ATOM 13 C1' U B 49 24.617 38.647 97.611 1.00 71.85 C
ATOM 14 N1 U B 49 23.785 39.841 98.055 1.00 73.06 N
ATOM 15 C2 U B 49 23.083 40.592 97.113 1.00 73.73 C
ATOM 16 O2 U B 49 23.092 40.372 95.912 1.00 74.25 O
ATOM 17 N3 U B 49 22.353 41.641 97.628 1.00 73.95 N
ATOM 18 C4 U B 49 22.252 42.010 98.961 1.00 74.05 C
ATOM 19 O4 U B 49 21.561 42.973 99.271 1.00 74.22 O
ATOM 20 C5 U B 49 23.000 41.187 99.883 1.00 73.83 C
ATOM 21 C6 U B 49 23.717 40.158 99.405 1.00 73.43 C
ATOM 22 P U B 50 26.844 36.217 94.556 1.00 63.02 P
ATOM 23 OP1 U B 50 28.262 36.225 94.967 1.00 63.17 O
ATOM 24 OP2 U B 50 26.429 36.967 93.357 1.00 63.20 O
ATOM 25 O5' U B 50 26.370 34.708 94.334 1.00 61.65 O
TER

Atoms:
OP1: (13.140,47.859,98.782)
OP2: (13.835,47.236,96.402)
C3': (17.915,46.189,99.073)
C1': (18.173,43.995,98.243)
C5': (15.438,45.908,99.611)
O4': (16.901,44.095,98.867)
C8: (16.951,44.496,96.084)
O2': (19.764,44.797,99.880)
C6: (18.971,43.308,93.460)
C5: (18.276,43.733,94.614)
C4: (18.880,43.494,95.838)
P: (13.744,46.892,97.840)
C4': (16.830,45.306,99.666)
C2': (19.002,45.170,98.749)
C2: (20.637,42.539,94.877)
N1: (20.170,42.706,93.631)
N3: (20.073,42.894,96.036)
N6: (18.504,43.474,92.218)
N7: (17.059,44.366,94.785)
N9: (18.010,43.993,96.787)
O5': (15.216,46.531,98.349)
O3': (18.328,47.170,100.013)
C4: (22.252,42.010,98.961)
N3: (22.353,41.641,97.628)
OP1: (26.334,38.737,101.317)
OP2: (28.488,37.503,101.956)
C2: (23.083,40.592,97.113)
C1': (24.617,38.647,97.611)
C3': (26.495,37.498,96.851)
O5': (27.825,37.736,99.557)
O4': (25.047,37.856,98.705)
C5': (27.073,36.571,99.208)
P: (27.746,38.387,101.025)
C4': (26.006,36.901,98.173)
C2': (25.922,38.920,96.873)
O2': (25.664,39.461,95.590)
N1: (23.785,39.841,98.055)
O4: (21.561,42.973,99.271)
O2: (23.092,40.372,95.912)
C6: (23.717,40.158,99.405)
C5: (23.000,41.187,99.883)
O3': (25.956,36.715,95.789)
Image (generated by PyMOL):
PyMOL image
show in jmol