ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A693:A696

Extra

PDB:
ATOM 1 O3' G A 692 49.930 -45.688 -32.925 1.00 26.99 O
ATOM 2 P A A 693 49.185 -44.270 -32.799 1.00 30.54 P
ATOM 3 OP1 A A 693 47.846 -44.532 -32.226 1.00 35.17 O
ATOM 4 OP2 A A 693 49.280 -43.607 -34.114 1.00 20.94 O
ATOM 5 O5' A A 693 50.075 -43.490 -31.736 1.00 27.15 O
ATOM 6 C5' A A 693 49.957 -43.772 -30.360 1.00 30.60 C
ATOM 7 C4' A A 693 49.879 -42.517 -29.545 1.00 30.52 C
ATOM 8 O4' A A 693 51.159 -41.854 -29.578 1.00 28.40 O
ATOM 9 C3' A A 693 48.851 -41.493 -30.027 1.00 36.24 C
ATOM 10 O3' A A 693 47.947 -41.166 -28.983 1.00 39.71 O
ATOM 11 C2' A A 693 49.674 -40.271 -30.390 1.00 36.73 C
ATOM 12 O2' A A 693 49.050 -39.053 -30.061 1.00 40.65 O
ATOM 13 C1' A A 693 50.942 -40.480 -29.585 1.00 31.80 C
ATOM 14 N9 A A 693 52.109 -39.812 -30.140 1.00 28.24 N
ATOM 15 C8 A A 693 52.342 -39.426 -31.419 1.00 30.56 C
ATOM 16 N7 A A 693 53.471 -38.781 -31.572 1.00 34.40 N
ATOM 17 C5 A A 693 53.997 -38.730 -30.295 1.00 33.01 C
ATOM 18 C6 A A 693 55.169 -38.188 -29.785 1.00 27.50 C
ATOM 19 N6 A A 693 56.060 -37.567 -30.532 1.00 28.53 N
ATOM 20 N1 A A 693 55.392 -38.312 -28.477 1.00 27.86 N
ATOM 21 C2 A A 693 54.480 -38.943 -27.735 1.00 32.58 C
ATOM 22 N3 A A 693 53.327 -39.493 -28.088 1.00 33.09 N
ATOM 23 C4 A A 693 53.152 -39.347 -29.406 1.00 32.97 C
ATOM 24 P G A 694 46.535 -41.925 -28.944 1.00 45.26 P
ATOM 25 OP1 G A 694 45.917 -41.761 -30.290 1.00 21.69 O
ATOM 26 OP2 G A 694 45.799 -41.438 -27.734 1.00 40.75 O
ATOM 27 O5' G A 694 46.995 -43.431 -28.731 1.00 32.37 O
TER

ATOM 1 O3' C B 695 49.102 -44.163 -20.360 1.00 17.39 O
ATOM 2 P U B 696 48.971 -42.598 -20.021 1.00 33.31 P
ATOM 3 OP1 U B 696 48.754 -42.488 -18.546 1.00 29.13 O
ATOM 4 OP2 U B 696 47.958 -42.011 -20.958 1.00 28.63 O
ATOM 5 O5' U B 696 50.403 -42.045 -20.392 1.00 35.35 O
ATOM 6 C5' U B 696 51.510 -42.297 -19.561 1.00 25.23 C
ATOM 7 C4' U B 696 52.729 -41.663 -20.123 1.00 25.93 C
ATOM 8 O4' U B 696 53.059 -42.294 -21.379 1.00 29.90 O
ATOM 9 C3' U B 696 52.603 -40.197 -20.469 1.00 23.89 C
ATOM 10 O3' U B 696 52.771 -39.362 -19.337 1.00 31.47 O
ATOM 11 C2' U B 696 53.688 -40.027 -21.513 1.00 29.77 C
ATOM 12 O2' U B 696 54.966 -39.974 -20.896 1.00 36.43 O
ATOM 13 C1' U B 696 53.583 -41.347 -22.268 1.00 25.87 C
ATOM 14 N1 U B 696 52.677 -41.244 -23.395 1.00 28.56 N
ATOM 15 C2 U B 696 53.141 -40.734 -24.557 1.00 29.80 C
ATOM 16 O2 U B 696 54.291 -40.387 -24.676 1.00 42.45 O
ATOM 17 N3 U B 696 52.244 -40.627 -25.565 1.00 27.23 N
ATOM 18 C4 U B 696 50.930 -41.006 -25.518 1.00 34.47 C
ATOM 19 O4 U B 696 50.191 -40.878 -26.518 1.00 47.08 O
ATOM 20 C5 U B 696 50.539 -41.526 -24.254 1.00 31.89 C
ATOM 21 C6 U B 696 51.395 -41.632 -23.256 1.00 30.65 C
ATOM 22 P A B 697 52.075 -37.913 -19.267 1.00 35.12 P
ATOM 23 OP1 A B 697 52.349 -37.352 -17.915 1.00 29.24 O
ATOM 24 OP2 A B 697 50.683 -38.064 -19.696 1.00 33.98 O
ATOM 25 O5' A B 697 52.879 -37.103 -20.353 1.00 33.42 O
TER

Atoms:
OP1: (47.846,-44.532,-32.226)
OP2: (49.280,-43.607,-34.114)
C3': (48.851,-41.493,-30.027)
C1': (50.942,-40.480,-29.585)
C5': (49.957,-43.772,-30.360)
O4': (51.159,-41.854,-29.578)
C8: (52.342,-39.426,-31.419)
O2': (49.050,-39.053,-30.061)
C6: (55.169,-38.188,-29.785)
C5: (53.997,-38.730,-30.295)
C4: (53.152,-39.347,-29.406)
P: (49.185,-44.270,-32.799)
C4': (49.879,-42.517,-29.545)
C2': (49.674,-40.271,-30.390)
C2: (54.480,-38.943,-27.735)
N1: (55.392,-38.312,-28.477)
N3: (53.327,-39.493,-28.088)
N6: (56.060,-37.567,-30.532)
N7: (53.471,-38.781,-31.572)
N9: (52.109,-39.812,-30.140)
O5': (50.075,-43.490,-31.736)
O3': (47.947,-41.166,-28.983)
C4: (50.930,-41.006,-25.518)
N3: (52.244,-40.627,-25.565)
OP1: (48.754,-42.488,-18.546)
OP2: (47.958,-42.011,-20.958)
C2: (53.141,-40.734,-24.557)
C1': (53.583,-41.347,-22.268)
C3': (52.603,-40.197,-20.469)
O5': (50.403,-42.045,-20.392)
O4': (53.059,-42.294,-21.379)
C5': (51.510,-42.297,-19.561)
P: (48.971,-42.598,-20.021)
C4': (52.729,-41.663,-20.123)
C2': (53.688,-40.027,-21.513)
O2': (54.966,-39.974,-20.896)
N1: (52.677,-41.244,-23.395)
O4: (50.191,-40.878,-26.518)
O2: (54.291,-40.387,-24.676)
C6: (51.395,-41.632,-23.256)
C5: (50.539,-41.526,-24.254)
O3': (52.771,-39.362,-19.337)
Image (generated by PyMOL):
PyMOL image
show in jmol