ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1760:1763

Extra

PDB:
ATOM 1 O3' G A 759 33.772 6.759 108.799 1.00 37.90 O
ATOM 2 P A A 760 32.664 6.988 109.894 1.00 37.24 P
ATOM 3 OP1 A A 760 32.935 8.333 110.487 1.00 37.57 O
ATOM 4 OP2 A A 760 32.637 5.809 110.761 1.00 37.35 O
ATOM 5 O5' A A 760 31.352 6.993 109.046 1.00 37.03 O
ATOM 6 C5' A A 760 31.197 7.864 107.970 1.00 36.85 C
ATOM 7 C4' A A 760 29.791 8.331 107.900 1.00 36.93 C
ATOM 8 O4' A A 760 28.954 7.299 107.290 1.00 36.68 O
ATOM 9 C3' A A 760 29.163 8.656 109.241 1.00 37.36 C
ATOM 10 O3' A A 760 28.715 9.997 109.222 1.00 37.55 O
ATOM 11 C2' A A 760 27.968 7.690 109.356 1.00 37.31 C
ATOM 12 O2' A A 760 26.836 8.258 109.985 1.00 37.61 O
ATOM 13 C1' A A 760 27.697 7.333 107.890 1.00 36.89 C
ATOM 14 N9 A A 760 27.036 6.048 107.642 1.00 36.70 N
ATOM 15 C8 A A 760 27.049 4.872 108.344 1.00 36.76 C
ATOM 16 N7 A A 760 26.303 3.898 107.797 1.00 36.55 N
ATOM 17 C5 A A 760 25.765 4.487 106.644 1.00 36.34 C
ATOM 18 C6 A A 760 24.919 4.020 105.616 1.00 36.08 C
ATOM 19 N6 A A 760 24.439 2.766 105.588 1.00 35.98 N
ATOM 20 N1 A A 760 24.603 4.859 104.596 1.00 35.94 N
ATOM 21 C2 A A 760 25.055 6.100 104.568 1.00 36.04 C
ATOM 22 N3 A A 760 25.860 6.652 105.472 1.00 36.28 N
ATOM 23 C4 A A 760 26.211 5.804 106.516 1.00 36.43 C
ATOM 24 P A A 761 29.453 11.075 110.139 1.00 48.46 P
ATOM 25 OP1 A A 761 29.559 10.472 111.536 1.00 48.77 O
ATOM 26 OP2 A A 761 28.734 12.347 109.970 1.00 48.63 O
ATOM 27 O5' A A 761 30.907 11.161 109.510 1.00 48.25 O
TER

ATOM 1 O3' C B 762 26.645 15.956 102.245 1.00 44.04 O
ATOM 2 P U B 763 25.260 16.100 103.063 1.00 43.08 P
ATOM 3 OP1 U B 763 24.560 17.299 102.526 1.00 43.21 O
ATOM 4 OP2 U B 763 25.588 16.031 104.495 1.00 43.39 O
ATOM 5 O5' U B 763 24.469 14.802 102.643 1.00 42.81 O
ATOM 6 C5' U B 763 24.130 14.598 101.296 1.00 42.49 C
ATOM 7 C4' U B 763 23.830 13.183 101.043 1.00 42.23 C
ATOM 8 O4' U B 763 24.982 12.380 101.347 1.00 42.10 O
ATOM 9 C3' U B 763 22.756 12.592 101.901 1.00 42.40 C
ATOM 10 O3' U B 763 21.470 12.999 101.457 1.00 42.46 O
ATOM 11 C2' U B 763 23.031 11.119 101.704 1.00 42.12 C
ATOM 12 O2' U B 763 22.670 10.748 100.394 1.00 41.81 O
ATOM 13 C1' U B 763 24.551 11.108 101.767 1.00 42.03 C
ATOM 14 N1 U B 763 25.074 10.853 103.126 1.00 42.27 N
ATOM 15 C2 U B 763 25.136 9.562 103.527 1.00 42.18 C
ATOM 16 O2 U B 763 24.734 8.706 102.769 1.00 41.92 O
ATOM 17 N3 U B 763 25.645 9.301 104.760 1.00 42.41 N
ATOM 18 C4 U B 763 26.117 10.240 105.613 1.00 42.72 C
ATOM 19 O4 U B 763 26.561 9.949 106.716 1.00 42.94 O
ATOM 20 C5 U B 763 26.026 11.562 105.115 1.00 42.79 C
ATOM 21 C6 U B 763 25.540 11.841 103.919 1.00 42.57 C
ATOM 22 P A B 764 20.166 13.001 102.425 1.00 40.62 P
ATOM 23 OP1 A B 764 19.114 13.670 101.654 1.00 40.65 O
ATOM 24 OP2 A B 764 20.556 13.564 103.760 1.00 40.99 O
ATOM 25 O5' A B 764 19.840 11.464 102.580 1.00 40.45 O
TER

Atoms:
OP1: (32.935,8.333,110.487)
OP2: (32.637,5.809,110.761)
C3': (29.163,8.656,109.241)
C1': (27.697,7.333,107.890)
C5': (31.197,7.864,107.970)
O4': (28.954,7.299,107.290)
C8: (27.049,4.872,108.344)
O2': (26.836,8.258,109.985)
C6: (24.919,4.020,105.616)
C5: (25.765,4.487,106.644)
C4: (26.211,5.804,106.516)
P: (32.664,6.988,109.894)
C4': (29.791,8.331,107.900)
C2': (27.968,7.690,109.356)
C2: (25.055,6.100,104.568)
N1: (24.603,4.859,104.596)
N3: (25.860,6.652,105.472)
N6: (24.439,2.766,105.588)
N7: (26.303,3.898,107.797)
N9: (27.036,6.048,107.642)
O5': (31.352,6.993,109.046)
O3': (28.715,9.997,109.222)
C4: (26.117,10.240,105.613)
N3: (25.645,9.301,104.760)
OP1: (24.560,17.299,102.526)
OP2: (25.588,16.031,104.495)
C2: (25.136,9.562,103.527)
C1': (24.551,11.108,101.767)
C3': (22.756,12.592,101.901)
O5': (24.469,14.802,102.643)
O4': (24.982,12.380,101.347)
C5': (24.130,14.598,101.296)
P: (25.260,16.100,103.063)
C4': (23.830,13.183,101.043)
C2': (23.031,11.119,101.704)
O2': (22.670,10.748,100.394)
N1: (25.074,10.853,103.126)
O4: (26.561,9.949,106.716)
O2: (24.734,8.706,102.769)
C6: (25.540,11.841,103.919)
C5: (26.026,11.562,105.115)
O3': (21.470,12.999,101.457)
Image (generated by PyMOL):
PyMOL image
show in jmol