Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2065:A2430
Extra
PDB:
ATOM 1 O3' A A2064 -69.759 -45.288 29.071 1.00 0.01 O
ATOM 2 P C A2065 -69.760 -44.010 30.032 1.00 0.01 P
ATOM 3 OP1 C A2065 -68.886 -44.318 31.179 1.00 0.01 O
ATOM 4 OP2 C A2065 -71.150 -43.631 30.294 1.00 0.01 O
ATOM 5 O5' C A2065 -69.087 -42.951 29.117 1.00 0.01 O
ATOM 6 C5' C A2065 -69.840 -41.882 28.611 1.00 0.01 C
ATOM 7 C4' C A2065 -69.442 -41.530 27.215 1.00 0.01 C
ATOM 8 O4' C A2065 -69.921 -42.543 26.312 1.00 0.01 O
ATOM 9 C3' C A2065 -70.042 -40.243 26.717 1.00 0.01 C
ATOM 10 O3' C A2065 -69.214 -39.135 26.983 1.00 0.01 O
ATOM 11 C2' C A2065 -70.286 -40.496 25.247 1.00 0.01 C
ATOM 12 O2' C A2065 -69.098 -40.307 24.509 1.00 0.01 O
ATOM 13 C1' C A2065 -70.621 -41.967 25.251 1.00 0.01 C
ATOM 14 N1 C A2065 -72.049 -42.209 25.483 1.00 0.01 N
ATOM 15 C2 C A2065 -72.988 -41.968 24.511 1.00 0.01 C
ATOM 16 O2 C A2065 -72.581 -41.532 23.457 1.00 0.01 O
ATOM 17 N3 C A2065 -74.281 -42.220 24.729 1.00 0.01 N
ATOM 18 C4 C A2065 -74.629 -42.723 25.889 1.00 0.01 C
ATOM 19 N4 C A2065 -75.897 -42.963 26.124 1.00 0.01 N
ATOM 20 C5 C A2065 -73.716 -42.998 26.899 1.00 0.01 C
ATOM 21 C6 C A2065 -72.446 -42.736 26.658 1.00 0.01 C
ATOM 22 P C A2066 -69.811 -37.887 27.762 1.00 0.01 P
ATOM 23 OP1 C A2066 -68.668 -37.112 28.285 1.00 0.01 O
ATOM 24 OP2 C A2066 -70.816 -38.404 28.713 1.00 0.01 O
ATOM 25 O5' C A2066 -70.535 -37.097 26.603 1.00 0.01 O
TER
ATOM 1 O3' G B2429 -84.595 -38.214 19.993 1.00 0.01 O
ATOM 2 P G B2430 -83.962 -39.308 19.014 1.00 0.01 P
ATOM 3 OP1 G B2430 -84.537 -39.054 17.673 1.00 0.01 O
ATOM 4 OP2 G B2430 -84.163 -40.642 19.647 1.00 0.01 O
ATOM 5 O5' G B2430 -82.428 -38.944 19.004 1.00 0.01 O
ATOM 6 C5' G B2430 -81.966 -37.831 18.284 1.00 0.01 C
ATOM 7 C4' G B2430 -80.470 -37.719 18.336 1.00 0.01 C
ATOM 8 O4' G B2430 -80.042 -37.551 19.699 1.00 0.01 O
ATOM 9 C3' G B2430 -79.687 -38.924 17.881 1.00 0.01 C
ATOM 10 O3' G B2430 -79.648 -39.064 16.485 1.00 0.01 O
ATOM 11 C2' G B2430 -78.336 -38.653 18.507 1.00 0.01 C
ATOM 12 O2' G B2430 -77.664 -37.603 17.826 1.00 0.01 O
ATOM 13 C1' G B2430 -78.767 -38.130 19.862 1.00 0.01 C
ATOM 14 N9 G B2430 -78.862 -39.186 20.880 1.00 0.01 N
ATOM 15 C8 G B2430 -80.016 -39.590 21.484 1.00 0.01 C
ATOM 16 N7 G B2430 -79.859 -40.522 22.374 1.00 0.01 N
ATOM 17 C5 G B2430 -78.487 -40.712 22.376 1.00 0.01 C
ATOM 18 C6 G B2430 -77.713 -41.588 23.158 1.00 0.01 C
ATOM 19 O6 G B2430 -78.088 -42.374 24.012 1.00 0.01 O
ATOM 20 N1 G B2430 -76.383 -41.483 22.854 1.00 0.01 N
ATOM 21 C2 G B2430 -75.869 -40.638 21.919 1.00 0.01 C
ATOM 22 N2 G B2430 -74.541 -40.697 21.778 1.00 0.01 N
ATOM 23 N3 G B2430 -76.580 -39.806 21.186 1.00 0.01 N
ATOM 24 C4 G B2430 -77.870 -39.896 21.466 1.00 0.01 C
ATOM 25 P U B2431 -79.663 -40.510 15.818 1.00 0.01 P
ATOM 26 OP1 U B2431 -80.045 -40.326 14.413 1.00 0.01 O
ATOM 27 OP2 U B2431 -80.483 -41.365 16.661 1.00 0.01 O
ATOM 28 O5' U B2431 -78.164 -40.966 15.930 1.00 0.01 O
TER
ATOM 2 P C A2065 -69.760 -44.010 30.032 1.00 0.01 P
ATOM 3 OP1 C A2065 -68.886 -44.318 31.179 1.00 0.01 O
ATOM 4 OP2 C A2065 -71.150 -43.631 30.294 1.00 0.01 O
ATOM 5 O5' C A2065 -69.087 -42.951 29.117 1.00 0.01 O
ATOM 6 C5' C A2065 -69.840 -41.882 28.611 1.00 0.01 C
ATOM 7 C4' C A2065 -69.442 -41.530 27.215 1.00 0.01 C
ATOM 8 O4' C A2065 -69.921 -42.543 26.312 1.00 0.01 O
ATOM 9 C3' C A2065 -70.042 -40.243 26.717 1.00 0.01 C
ATOM 10 O3' C A2065 -69.214 -39.135 26.983 1.00 0.01 O
ATOM 11 C2' C A2065 -70.286 -40.496 25.247 1.00 0.01 C
ATOM 12 O2' C A2065 -69.098 -40.307 24.509 1.00 0.01 O
ATOM 13 C1' C A2065 -70.621 -41.967 25.251 1.00 0.01 C
ATOM 14 N1 C A2065 -72.049 -42.209 25.483 1.00 0.01 N
ATOM 15 C2 C A2065 -72.988 -41.968 24.511 1.00 0.01 C
ATOM 16 O2 C A2065 -72.581 -41.532 23.457 1.00 0.01 O
ATOM 17 N3 C A2065 -74.281 -42.220 24.729 1.00 0.01 N
ATOM 18 C4 C A2065 -74.629 -42.723 25.889 1.00 0.01 C
ATOM 19 N4 C A2065 -75.897 -42.963 26.124 1.00 0.01 N
ATOM 20 C5 C A2065 -73.716 -42.998 26.899 1.00 0.01 C
ATOM 21 C6 C A2065 -72.446 -42.736 26.658 1.00 0.01 C
ATOM 22 P C A2066 -69.811 -37.887 27.762 1.00 0.01 P
ATOM 23 OP1 C A2066 -68.668 -37.112 28.285 1.00 0.01 O
ATOM 24 OP2 C A2066 -70.816 -38.404 28.713 1.00 0.01 O
ATOM 25 O5' C A2066 -70.535 -37.097 26.603 1.00 0.01 O
TER
ATOM 1 O3' G B2429 -84.595 -38.214 19.993 1.00 0.01 O
ATOM 2 P G B2430 -83.962 -39.308 19.014 1.00 0.01 P
ATOM 3 OP1 G B2430 -84.537 -39.054 17.673 1.00 0.01 O
ATOM 4 OP2 G B2430 -84.163 -40.642 19.647 1.00 0.01 O
ATOM 5 O5' G B2430 -82.428 -38.944 19.004 1.00 0.01 O
ATOM 6 C5' G B2430 -81.966 -37.831 18.284 1.00 0.01 C
ATOM 7 C4' G B2430 -80.470 -37.719 18.336 1.00 0.01 C
ATOM 8 O4' G B2430 -80.042 -37.551 19.699 1.00 0.01 O
ATOM 9 C3' G B2430 -79.687 -38.924 17.881 1.00 0.01 C
ATOM 10 O3' G B2430 -79.648 -39.064 16.485 1.00 0.01 O
ATOM 11 C2' G B2430 -78.336 -38.653 18.507 1.00 0.01 C
ATOM 12 O2' G B2430 -77.664 -37.603 17.826 1.00 0.01 O
ATOM 13 C1' G B2430 -78.767 -38.130 19.862 1.00 0.01 C
ATOM 14 N9 G B2430 -78.862 -39.186 20.880 1.00 0.01 N
ATOM 15 C8 G B2430 -80.016 -39.590 21.484 1.00 0.01 C
ATOM 16 N7 G B2430 -79.859 -40.522 22.374 1.00 0.01 N
ATOM 17 C5 G B2430 -78.487 -40.712 22.376 1.00 0.01 C
ATOM 18 C6 G B2430 -77.713 -41.588 23.158 1.00 0.01 C
ATOM 19 O6 G B2430 -78.088 -42.374 24.012 1.00 0.01 O
ATOM 20 N1 G B2430 -76.383 -41.483 22.854 1.00 0.01 N
ATOM 21 C2 G B2430 -75.869 -40.638 21.919 1.00 0.01 C
ATOM 22 N2 G B2430 -74.541 -40.697 21.778 1.00 0.01 N
ATOM 23 N3 G B2430 -76.580 -39.806 21.186 1.00 0.01 N
ATOM 24 C4 G B2430 -77.870 -39.896 21.466 1.00 0.01 C
ATOM 25 P U B2431 -79.663 -40.510 15.818 1.00 0.01 P
ATOM 26 OP1 U B2431 -80.045 -40.326 14.413 1.00 0.01 O
ATOM 27 OP2 U B2431 -80.483 -41.365 16.661 1.00 0.01 O
ATOM 28 O5' U B2431 -78.164 -40.966 15.930 1.00 0.01 O
TER
Atoms:
C2: (-72.988,-41.968,24.511)
OP1: (-68.886,-44.318,31.179)
OP2: (-71.150,-43.631,30.294)
C4: (-74.629,-42.723,25.889)
O5': (-69.087,-42.951,29.117)
C3': (-70.042,-40.243,26.717)
C1': (-70.621,-41.967,25.251)
O4': (-69.921,-42.543,26.312)
C5': (-69.840,-41.882,28.611)
P: (-69.760,-44.010,30.032)
O2: (-72.581,-41.532,23.457)
C4': (-69.442,-41.530,27.215)
C2': (-70.286,-40.496,25.247)
O2': (-69.098,-40.307,24.509)
N1: (-72.049,-42.209,25.483)
N3: (-74.281,-42.220,24.729)
N4: (-75.897,-42.963,26.124)
C6: (-72.446,-42.736,26.658)
C5: (-73.716,-42.998,26.899)
O3': (-69.214,-39.135,26.983)
OP1: (-68.886,-44.318,31.179)
OP2: (-71.150,-43.631,30.294)
C4: (-74.629,-42.723,25.889)
O5': (-69.087,-42.951,29.117)
C3': (-70.042,-40.243,26.717)
C1': (-70.621,-41.967,25.251)
O4': (-69.921,-42.543,26.312)
C5': (-69.840,-41.882,28.611)
P: (-69.760,-44.010,30.032)
O2: (-72.581,-41.532,23.457)
C4': (-69.442,-41.530,27.215)
C2': (-70.286,-40.496,25.247)
O2': (-69.098,-40.307,24.509)
N1: (-72.049,-42.209,25.483)
N3: (-74.281,-42.220,24.729)
N4: (-75.897,-42.963,26.124)
C6: (-72.446,-42.736,26.658)
C5: (-73.716,-42.998,26.899)
O3': (-69.214,-39.135,26.983)
OP1: (-84.537,-39.054,17.673)
OP2: (-84.163,-40.642,19.647)
C3': (-79.687,-38.924,17.881)
C1': (-78.767,-38.130,19.862)
C5': (-81.966,-37.831,18.284)
O6: (-78.088,-42.374,24.012)
O4': (-80.042,-37.551,19.699)
C8: (-80.016,-39.590,21.484)
C2: (-75.869,-40.638,21.919)
C6: (-77.713,-41.588,23.158)
C5: (-78.487,-40.712,22.376)
C4: (-77.870,-39.896,21.466)
P: (-83.962,-39.308,19.014)
C4': (-80.470,-37.719,18.336)
C2': (-78.336,-38.653,18.507)
O2': (-77.664,-37.603,17.826)
N1: (-76.383,-41.483,22.854)
N2: (-74.541,-40.697,21.778)
N3: (-76.580,-39.806,21.186)
N7: (-79.859,-40.522,22.374)
N9: (-78.862,-39.186,20.880)
O5': (-82.428,-38.944,19.004)
O3': (-79.648,-39.064,16.485)
OP2: (-84.163,-40.642,19.647)
C3': (-79.687,-38.924,17.881)
C1': (-78.767,-38.130,19.862)
C5': (-81.966,-37.831,18.284)
O6: (-78.088,-42.374,24.012)
O4': (-80.042,-37.551,19.699)
C8: (-80.016,-39.590,21.484)
C2: (-75.869,-40.638,21.919)
C6: (-77.713,-41.588,23.158)
C5: (-78.487,-40.712,22.376)
C4: (-77.870,-39.896,21.466)
P: (-83.962,-39.308,19.014)
C4': (-80.470,-37.719,18.336)
C2': (-78.336,-38.653,18.507)
O2': (-77.664,-37.603,17.826)
N1: (-76.383,-41.483,22.854)
N2: (-74.541,-40.697,21.778)
N3: (-76.580,-39.806,21.186)
N7: (-79.859,-40.522,22.374)
N9: (-78.862,-39.186,20.880)
O5': (-82.428,-38.944,19.004)
O3': (-79.648,-39.064,16.485)
Image (generated by PyMOL):