Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:047:079
Extra
PDB:
ATOM 1 O3' G A 46 49.014 166.964 36.144 1.00 48.90 O
ATOM 2 P C A 47 48.772 168.370 35.407 1.00 48.14 P
ATOM 3 OP1 C A 47 47.411 168.365 34.808 1.00 50.00 O
ATOM 4 OP2 C A 47 49.957 168.619 34.542 1.00 46.67 O
ATOM 5 O5' C A 47 48.756 169.414 36.606 1.00 48.17 O
ATOM 6 C5' C A 47 49.102 170.791 36.405 1.00 47.95 C
ATOM 7 C4' C A 47 48.489 171.634 37.493 1.00 48.04 C
ATOM 8 O4' C A 47 47.057 171.733 37.297 1.00 47.60 O
ATOM 9 C3' C A 47 48.625 171.065 38.891 1.00 49.00 C
ATOM 10 O3' C A 47 49.906 171.342 39.426 1.00 52.45 O
ATOM 11 C2' C A 47 47.494 171.759 39.638 1.00 48.05 C
ATOM 12 O2' C A 47 47.811 173.090 40.009 1.00 47.83 O
ATOM 13 C1' C A 47 46.410 171.795 38.559 1.00 46.48 C
ATOM 14 N1 C A 47 45.403 170.719 38.635 1.00 45.22 N
ATOM 15 C2 C A 47 44.344 170.856 39.544 1.00 45.75 C
ATOM 16 O2 C A 47 44.333 171.834 40.304 1.00 48.50 O
ATOM 17 N3 C A 47 43.370 169.917 39.578 1.00 43.25 N
ATOM 18 C4 C A 47 43.433 168.863 38.761 1.00 43.27 C
ATOM 19 N4 C A 47 42.435 167.975 38.807 1.00 42.31 N
ATOM 20 C5 C A 47 44.521 168.674 37.855 1.00 42.84 C
ATOM 21 C6 C A 47 45.475 169.617 37.826 1.00 44.35 C
ATOM 22 P C A 48 50.558 170.334 40.488 1.00 55.18 P
ATOM 23 OP1 C A 48 51.842 170.956 40.910 1.00 54.36 O
ATOM 24 OP2 C A 48 50.551 168.957 39.939 1.00 53.37 O
ATOM 25 O5' C A 48 49.549 170.387 41.712 1.00 52.92 O
TER
ATOM 1 O3' G B 78 33.504 167.933 45.251 1.00 69.54 O
ATOM 2 P G B 79 33.055 168.991 44.125 1.00 71.46 P
ATOM 3 OP1 G B 79 31.769 169.565 44.609 1.00 70.91 O
ATOM 4 OP2 G B 79 33.119 168.330 42.788 1.00 70.20 O
ATOM 5 O5' G B 79 34.168 170.131 44.165 1.00 68.59 O
ATOM 6 C5' G B 79 34.157 171.149 45.179 1.00 66.01 C
ATOM 7 C4' G B 79 35.342 172.066 45.000 1.00 66.26 C
ATOM 8 O4' G B 79 36.564 171.284 45.118 1.00 65.19 O
ATOM 9 C3' G B 79 35.472 172.713 43.629 1.00 66.46 C
ATOM 10 O3' G B 79 34.650 173.861 43.460 1.00 67.53 O
ATOM 11 C2' G B 79 36.958 173.039 43.566 1.00 65.55 C
ATOM 12 O2' G B 79 37.327 174.194 44.298 1.00 65.96 O
ATOM 13 C1' G B 79 37.548 171.795 44.228 1.00 62.60 C
ATOM 14 N9 G B 79 37.874 170.764 43.246 1.00 57.78 N
ATOM 15 C8 G B 79 37.106 169.687 42.861 1.00 56.37 C
ATOM 16 N7 G B 79 37.693 168.934 41.969 1.00 54.78 N
ATOM 17 C5 G B 79 38.917 169.554 41.753 1.00 53.73 C
ATOM 18 C6 G B 79 39.996 169.193 40.907 1.00 52.76 C
ATOM 19 O6 G B 79 40.092 168.221 40.154 1.00 52.88 O
ATOM 20 N1 G B 79 41.042 170.100 40.999 1.00 52.67 N
ATOM 21 C2 G B 79 41.050 171.216 41.796 1.00 54.22 C
ATOM 22 N2 G B 79 42.139 171.984 41.732 1.00 54.26 N
ATOM 23 N3 G B 79 40.059 171.558 42.593 1.00 54.50 N
ATOM 24 C4 G B 79 39.035 170.689 42.524 1.00 54.62 C
ATOM 25 P A B 80 34.017 174.174 42.015 1.00 68.83 P
ATOM 26 OP1 A B 80 33.122 175.347 42.196 1.00 68.89 O
ATOM 27 OP2 A B 80 33.471 172.906 41.458 1.00 67.11 O
ATOM 28 O5' A B 80 35.257 174.610 41.110 1.00 66.69 O
TER
ATOM 2 P C A 47 48.772 168.370 35.407 1.00 48.14 P
ATOM 3 OP1 C A 47 47.411 168.365 34.808 1.00 50.00 O
ATOM 4 OP2 C A 47 49.957 168.619 34.542 1.00 46.67 O
ATOM 5 O5' C A 47 48.756 169.414 36.606 1.00 48.17 O
ATOM 6 C5' C A 47 49.102 170.791 36.405 1.00 47.95 C
ATOM 7 C4' C A 47 48.489 171.634 37.493 1.00 48.04 C
ATOM 8 O4' C A 47 47.057 171.733 37.297 1.00 47.60 O
ATOM 9 C3' C A 47 48.625 171.065 38.891 1.00 49.00 C
ATOM 10 O3' C A 47 49.906 171.342 39.426 1.00 52.45 O
ATOM 11 C2' C A 47 47.494 171.759 39.638 1.00 48.05 C
ATOM 12 O2' C A 47 47.811 173.090 40.009 1.00 47.83 O
ATOM 13 C1' C A 47 46.410 171.795 38.559 1.00 46.48 C
ATOM 14 N1 C A 47 45.403 170.719 38.635 1.00 45.22 N
ATOM 15 C2 C A 47 44.344 170.856 39.544 1.00 45.75 C
ATOM 16 O2 C A 47 44.333 171.834 40.304 1.00 48.50 O
ATOM 17 N3 C A 47 43.370 169.917 39.578 1.00 43.25 N
ATOM 18 C4 C A 47 43.433 168.863 38.761 1.00 43.27 C
ATOM 19 N4 C A 47 42.435 167.975 38.807 1.00 42.31 N
ATOM 20 C5 C A 47 44.521 168.674 37.855 1.00 42.84 C
ATOM 21 C6 C A 47 45.475 169.617 37.826 1.00 44.35 C
ATOM 22 P C A 48 50.558 170.334 40.488 1.00 55.18 P
ATOM 23 OP1 C A 48 51.842 170.956 40.910 1.00 54.36 O
ATOM 24 OP2 C A 48 50.551 168.957 39.939 1.00 53.37 O
ATOM 25 O5' C A 48 49.549 170.387 41.712 1.00 52.92 O
TER
ATOM 1 O3' G B 78 33.504 167.933 45.251 1.00 69.54 O
ATOM 2 P G B 79 33.055 168.991 44.125 1.00 71.46 P
ATOM 3 OP1 G B 79 31.769 169.565 44.609 1.00 70.91 O
ATOM 4 OP2 G B 79 33.119 168.330 42.788 1.00 70.20 O
ATOM 5 O5' G B 79 34.168 170.131 44.165 1.00 68.59 O
ATOM 6 C5' G B 79 34.157 171.149 45.179 1.00 66.01 C
ATOM 7 C4' G B 79 35.342 172.066 45.000 1.00 66.26 C
ATOM 8 O4' G B 79 36.564 171.284 45.118 1.00 65.19 O
ATOM 9 C3' G B 79 35.472 172.713 43.629 1.00 66.46 C
ATOM 10 O3' G B 79 34.650 173.861 43.460 1.00 67.53 O
ATOM 11 C2' G B 79 36.958 173.039 43.566 1.00 65.55 C
ATOM 12 O2' G B 79 37.327 174.194 44.298 1.00 65.96 O
ATOM 13 C1' G B 79 37.548 171.795 44.228 1.00 62.60 C
ATOM 14 N9 G B 79 37.874 170.764 43.246 1.00 57.78 N
ATOM 15 C8 G B 79 37.106 169.687 42.861 1.00 56.37 C
ATOM 16 N7 G B 79 37.693 168.934 41.969 1.00 54.78 N
ATOM 17 C5 G B 79 38.917 169.554 41.753 1.00 53.73 C
ATOM 18 C6 G B 79 39.996 169.193 40.907 1.00 52.76 C
ATOM 19 O6 G B 79 40.092 168.221 40.154 1.00 52.88 O
ATOM 20 N1 G B 79 41.042 170.100 40.999 1.00 52.67 N
ATOM 21 C2 G B 79 41.050 171.216 41.796 1.00 54.22 C
ATOM 22 N2 G B 79 42.139 171.984 41.732 1.00 54.26 N
ATOM 23 N3 G B 79 40.059 171.558 42.593 1.00 54.50 N
ATOM 24 C4 G B 79 39.035 170.689 42.524 1.00 54.62 C
ATOM 25 P A B 80 34.017 174.174 42.015 1.00 68.83 P
ATOM 26 OP1 A B 80 33.122 175.347 42.196 1.00 68.89 O
ATOM 27 OP2 A B 80 33.471 172.906 41.458 1.00 67.11 O
ATOM 28 O5' A B 80 35.257 174.610 41.110 1.00 66.69 O
TER
Atoms:
C2: (44.344,170.856,39.544)
OP1: (47.411,168.365,34.808)
OP2: (49.957,168.619,34.542)
C4: (43.433,168.863,38.761)
O5': (48.756,169.414,36.606)
C3': (48.625,171.065,38.891)
C1': (46.410,171.795,38.559)
O4': (47.057,171.733,37.297)
C5': (49.102,170.791,36.405)
P: (48.772,168.370,35.407)
O2: (44.333,171.834,40.304)
C4': (48.489,171.634,37.493)
C2': (47.494,171.759,39.638)
O2': (47.811,173.090,40.009)
N1: (45.403,170.719,38.635)
N3: (43.370,169.917,39.578)
N4: (42.435,167.975,38.807)
C6: (45.475,169.617,37.826)
C5: (44.521,168.674,37.855)
O3': (49.906,171.342,39.426)
OP1: (47.411,168.365,34.808)
OP2: (49.957,168.619,34.542)
C4: (43.433,168.863,38.761)
O5': (48.756,169.414,36.606)
C3': (48.625,171.065,38.891)
C1': (46.410,171.795,38.559)
O4': (47.057,171.733,37.297)
C5': (49.102,170.791,36.405)
P: (48.772,168.370,35.407)
O2: (44.333,171.834,40.304)
C4': (48.489,171.634,37.493)
C2': (47.494,171.759,39.638)
O2': (47.811,173.090,40.009)
N1: (45.403,170.719,38.635)
N3: (43.370,169.917,39.578)
N4: (42.435,167.975,38.807)
C6: (45.475,169.617,37.826)
C5: (44.521,168.674,37.855)
O3': (49.906,171.342,39.426)
OP1: (31.769,169.565,44.609)
OP2: (33.119,168.330,42.788)
C3': (35.472,172.713,43.629)
C1': (37.548,171.795,44.228)
C5': (34.157,171.149,45.179)
O6: (40.092,168.221,40.154)
O4': (36.564,171.284,45.118)
C8: (37.106,169.687,42.861)
C2: (41.050,171.216,41.796)
C6: (39.996,169.193,40.907)
C5: (38.917,169.554,41.753)
C4: (39.035,170.689,42.524)
P: (33.055,168.991,44.125)
C4': (35.342,172.066,45.000)
C2': (36.958,173.039,43.566)
O2': (37.327,174.194,44.298)
N1: (41.042,170.100,40.999)
N2: (42.139,171.984,41.732)
N3: (40.059,171.558,42.593)
N7: (37.693,168.934,41.969)
N9: (37.874,170.764,43.246)
O5': (34.168,170.131,44.165)
O3': (34.650,173.861,43.460)
OP2: (33.119,168.330,42.788)
C3': (35.472,172.713,43.629)
C1': (37.548,171.795,44.228)
C5': (34.157,171.149,45.179)
O6: (40.092,168.221,40.154)
O4': (36.564,171.284,45.118)
C8: (37.106,169.687,42.861)
C2: (41.050,171.216,41.796)
C6: (39.996,169.193,40.907)
C5: (38.917,169.554,41.753)
C4: (39.035,170.689,42.524)
P: (33.055,168.991,44.125)
C4': (35.342,172.066,45.000)
C2': (36.958,173.039,43.566)
O2': (37.327,174.194,44.298)
N1: (41.042,170.100,40.999)
N2: (42.139,171.984,41.732)
N3: (40.059,171.558,42.593)
N7: (37.693,168.934,41.969)
N9: (37.874,170.764,43.246)
O5': (34.168,170.131,44.165)
O3': (34.650,173.861,43.460)
Image (generated by PyMOL):