ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A928:A930

Extra

PDB:
ATOM 1 O3' G A 927 30.844 64.505 78.227 1.00 55.95 O
ATOM 2 P G A 928 31.632 64.496 79.634 1.00 55.43 P
ATOM 3 OP1 G A 928 33.061 64.246 79.322 1.00 55.55 O
ATOM 4 OP2 G A 928 30.925 63.606 80.589 1.00 56.19 O
ATOM 5 O5' G A 928 31.473 65.976 80.198 1.00 56.07 O
ATOM 6 C5' G A 928 32.063 67.107 79.541 1.00 56.30 C
ATOM 7 C4' G A 928 31.786 68.360 80.344 1.00 55.84 C
ATOM 8 O4' G A 928 30.364 68.645 80.357 1.00 55.61 O
ATOM 9 C3' G A 928 32.188 68.303 81.808 1.00 55.28 C
ATOM 10 O3' G A 928 33.576 68.633 81.874 1.00 55.59 O
ATOM 11 C2' G A 928 31.286 69.362 82.440 1.00 54.01 C
ATOM 12 O2' G A 928 31.794 70.671 82.338 1.00 54.18 O
ATOM 13 C1' G A 928 30.011 69.239 81.595 1.00 54.62 C
ATOM 14 N9 G A 928 28.983 68.415 82.219 1.00 54.14 N
ATOM 15 C8 G A 928 28.677 67.110 81.926 1.00 54.06 C
ATOM 16 N7 G A 928 27.733 66.626 82.685 1.00 53.37 N
ATOM 17 C5 G A 928 27.398 67.675 83.528 1.00 52.71 C
ATOM 18 C6 G A 928 26.461 67.738 84.587 1.00 52.33 C
ATOM 19 O6 G A 928 25.741 66.838 85.033 1.00 53.19 O
ATOM 20 N1 G A 928 26.421 69.001 85.160 1.00 51.68 N
ATOM 21 C2 G A 928 27.197 70.063 84.774 1.00 52.20 C
ATOM 22 N2 G A 928 27.000 71.213 85.424 1.00 53.02 N
ATOM 23 N3 G A 928 28.100 70.006 83.810 1.00 52.23 N
ATOM 24 C4 G A 928 28.144 68.792 83.235 1.00 53.04 C
ATOM 25 P U A 929 34.511 68.011 83.020 1.00 55.41 P
ATOM 26 OP1 U A 929 35.852 68.540 82.705 1.00 55.14 O
ATOM 27 OP2 U A 929 34.308 66.541 83.154 1.00 54.14 O
ATOM 28 O5' U A 929 34.024 68.749 84.337 1.00 55.04 O
TER

ATOM 1 O3' U B 929 33.891 70.992 87.941 1.00 52.67 O
ATOM 2 P A B 930 35.228 71.730 88.426 1.00 52.18 P
ATOM 3 OP1 A B 930 35.687 72.576 87.308 1.00 50.44 O
ATOM 4 OP2 A B 930 36.156 70.752 89.049 1.00 50.83 O
ATOM 5 O5' A B 930 34.710 72.706 89.562 1.00 50.44 O
ATOM 6 C5' A B 930 35.509 73.793 90.009 1.00 47.93 C
ATOM 7 C4' A B 930 34.678 74.709 90.857 1.00 46.50 C
ATOM 8 O4' A B 930 33.613 75.273 90.044 1.00 46.75 O
ATOM 9 C3' A B 930 33.944 74.035 92.000 1.00 45.25 C
ATOM 10 O3' A B 930 34.772 73.831 93.127 1.00 42.11 O
ATOM 11 C2' A B 930 32.812 75.011 92.256 1.00 46.86 C
ATOM 12 O2' A B 930 33.236 76.138 92.988 1.00 48.50 O
ATOM 13 C1' A B 930 32.441 75.406 90.823 1.00 47.76 C
ATOM 14 N9 A B 930 31.424 74.514 90.263 1.00 50.40 N
ATOM 15 C8 A B 930 31.489 73.142 90.107 1.00 50.76 C
ATOM 16 N7 A B 930 30.401 72.611 89.606 1.00 50.42 N
ATOM 17 C5 A B 930 29.565 73.704 89.411 1.00 52.04 C
ATOM 18 C6 A B 930 28.262 73.812 88.919 1.00 53.64 C
ATOM 19 N6 A B 930 27.556 72.763 88.521 1.00 54.76 N
ATOM 20 N1 A B 930 27.704 75.049 88.852 1.00 54.56 N
ATOM 21 C2 A B 930 28.432 76.101 89.258 1.00 54.11 C
ATOM 22 N3 A B 930 29.674 76.128 89.746 1.00 53.01 N
ATOM 23 C4 A B 930 30.187 74.883 89.801 1.00 51.73 C
ATOM 24 P G B 931 34.670 72.456 93.947 1.00 42.16 P
ATOM 25 OP1 G B 931 35.643 72.494 95.077 1.00 40.99 O
ATOM 26 OP2 G B 931 34.723 71.354 92.968 1.00 41.93 O
ATOM 27 O5' G B 931 33.202 72.472 94.550 1.00 40.21 O
TER

Atoms:
OP1: (33.061,64.246,79.322)
OP2: (30.925,63.606,80.589)
C3': (32.188,68.303,81.808)
C1': (30.011,69.239,81.595)
C5': (32.063,67.107,79.541)
O6: (25.741,66.838,85.033)
O4': (30.364,68.645,80.357)
C8: (28.677,67.110,81.926)
C2: (27.197,70.063,84.774)
C6: (26.461,67.738,84.587)
C5: (27.398,67.675,83.528)
C4: (28.144,68.792,83.235)
P: (31.632,64.496,79.634)
C4': (31.786,68.360,80.344)
C2': (31.286,69.362,82.440)
O2': (31.794,70.671,82.338)
N1: (26.421,69.001,85.160)
N2: (27.000,71.213,85.424)
N3: (28.100,70.006,83.810)
N7: (27.733,66.626,82.685)
N9: (28.983,68.415,82.219)
O5': (31.473,65.976,80.198)
O3': (33.576,68.633,81.874)
OP1: (35.687,72.576,87.308)
OP2: (36.156,70.752,89.049)
C3': (33.944,74.035,92.000)
C1': (32.441,75.406,90.823)
C5': (35.509,73.793,90.009)
O4': (33.613,75.273,90.044)
C8: (31.489,73.142,90.107)
O2': (33.236,76.138,92.988)
C6: (28.262,73.812,88.919)
C5: (29.565,73.704,89.411)
C4: (30.187,74.883,89.801)
P: (35.228,71.730,88.426)
C4': (34.678,74.709,90.857)
C2': (32.812,75.011,92.256)
C2: (28.432,76.101,89.258)
N1: (27.704,75.049,88.852)
N3: (29.674,76.128,89.746)
N6: (27.556,72.763,88.521)
N7: (30.401,72.611,89.606)
N9: (31.424,74.514,90.263)
O5': (34.710,72.706,89.562)
O3': (34.772,73.831,93.127)
Image (generated by PyMOL):
PyMOL image
show in jmol