Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2660:A2507
Extra
PDB:
ATOM 1 O3' A A2659 16.517 160.784 139.269 1.00 58.58 O
ATOM 2 P C A2660 15.143 161.222 138.563 1.00 60.67 P
ATOM 3 OP1 C A2660 14.280 161.727 139.662 1.00 61.73 O
ATOM 4 OP2 C A2660 14.643 160.126 137.696 1.00 60.85 O
ATOM 5 O5' C A2660 15.542 162.439 137.607 1.00 59.48 O
ATOM 6 C5' C A2660 16.210 163.605 138.128 1.00 59.52 C
ATOM 7 C4' C A2660 17.018 164.286 137.046 1.00 59.32 C
ATOM 8 O4' C A2660 17.986 163.353 136.501 1.00 59.26 O
ATOM 9 C3' C A2660 16.236 164.735 135.828 1.00 59.64 C
ATOM 10 O3' C A2660 15.626 165.996 136.039 1.00 60.62 O
ATOM 11 C2' C A2660 17.318 164.814 134.764 1.00 58.01 C
ATOM 12 O2' C A2660 18.110 165.970 134.936 1.00 57.85 O
ATOM 13 C1' C A2660 18.157 163.586 135.112 1.00 57.00 C
ATOM 14 N1 C A2660 17.760 162.362 134.383 1.00 55.59 N
ATOM 15 C2 C A2660 18.354 162.088 133.143 1.00 55.19 C
ATOM 16 O2 C A2660 19.236 162.847 132.718 1.00 55.92 O
ATOM 17 N3 C A2660 17.958 160.995 132.444 1.00 54.71 N
ATOM 18 C4 C A2660 17.027 160.180 132.952 1.00 55.33 C
ATOM 19 N4 C A2660 16.648 159.121 132.226 1.00 54.44 N
ATOM 20 C5 C A2660 16.434 160.416 134.226 1.00 55.28 C
ATOM 21 C6 C A2660 16.822 161.510 134.898 1.00 55.21 C
ATOM 22 P C A2661 14.356 166.397 135.168 1.00 60.21 P
ATOM 23 OP1 C A2661 13.906 167.679 135.752 1.00 60.19 O
ATOM 24 OP2 C A2661 13.447 165.217 135.164 1.00 59.45 O
ATOM 25 O5' C A2661 14.943 166.610 133.701 1.00 60.56 O
TER
ATOM 1 P G B2507 19.947 158.404 120.801 1.00 72.03 P
ATOM 2 OP1 G B2507 20.988 158.521 119.746 1.00 71.46 O
ATOM 3 OP2 G B2507 19.777 157.114 121.526 1.00 71.58 O
ATOM 4 O5' G B2507 20.224 159.565 121.865 1.00 70.98 O
ATOM 5 C5' G B2507 20.521 160.919 121.435 1.00 67.36 C
ATOM 6 C4' G B2507 20.545 161.855 122.616 1.00 65.44 C
ATOM 7 O4' G B2507 19.383 161.592 123.434 1.00 64.97 O
ATOM 8 C3' G B2507 21.667 161.644 123.616 1.00 64.26 C
ATOM 9 O3' G B2507 22.899 162.217 123.183 1.00 63.64 O
ATOM 10 C2' G B2507 21.132 162.359 124.850 1.00 64.07 C
ATOM 11 O2' G B2507 21.274 163.762 124.778 1.00 62.59 O
ATOM 12 C1' G B2507 19.642 162.029 124.762 1.00 64.17 C
ATOM 13 N9 G B2507 19.187 161.007 125.702 1.00 63.36 N
ATOM 14 C8 G B2507 18.726 159.754 125.391 1.00 63.40 C
ATOM 15 N7 G B2507 18.387 159.059 126.442 1.00 63.34 N
ATOM 16 C5 G B2507 18.641 159.899 127.516 1.00 62.34 C
ATOM 17 C6 G B2507 18.460 159.686 128.912 1.00 61.56 C
ATOM 18 O6 G B2507 18.023 158.684 129.488 1.00 59.66 O
ATOM 19 N1 G B2507 18.843 160.798 129.654 1.00 60.65 N
ATOM 20 C2 G B2507 19.324 161.967 129.124 1.00 61.73 C
ATOM 21 N2 G B2507 19.645 162.919 130.007 1.00 62.30 N
ATOM 22 N3 G B2507 19.482 162.187 127.824 1.00 62.35 N
ATOM 23 C4 G B2507 19.129 161.111 127.083 1.00 62.55 C
ATOM 24 P U B2508 24.282 161.638 123.761 1.00 61.87 P
ATOM 25 OP1 U B2508 25.422 162.119 122.939 1.00 58.50 O
ATOM 26 OP2 U B2508 24.068 160.181 123.950 1.00 62.17 O
ATOM 27 O5' U B2508 24.389 162.288 125.209 1.00 61.02 O
TER
ATOM 2 P C A2660 15.143 161.222 138.563 1.00 60.67 P
ATOM 3 OP1 C A2660 14.280 161.727 139.662 1.00 61.73 O
ATOM 4 OP2 C A2660 14.643 160.126 137.696 1.00 60.85 O
ATOM 5 O5' C A2660 15.542 162.439 137.607 1.00 59.48 O
ATOM 6 C5' C A2660 16.210 163.605 138.128 1.00 59.52 C
ATOM 7 C4' C A2660 17.018 164.286 137.046 1.00 59.32 C
ATOM 8 O4' C A2660 17.986 163.353 136.501 1.00 59.26 O
ATOM 9 C3' C A2660 16.236 164.735 135.828 1.00 59.64 C
ATOM 10 O3' C A2660 15.626 165.996 136.039 1.00 60.62 O
ATOM 11 C2' C A2660 17.318 164.814 134.764 1.00 58.01 C
ATOM 12 O2' C A2660 18.110 165.970 134.936 1.00 57.85 O
ATOM 13 C1' C A2660 18.157 163.586 135.112 1.00 57.00 C
ATOM 14 N1 C A2660 17.760 162.362 134.383 1.00 55.59 N
ATOM 15 C2 C A2660 18.354 162.088 133.143 1.00 55.19 C
ATOM 16 O2 C A2660 19.236 162.847 132.718 1.00 55.92 O
ATOM 17 N3 C A2660 17.958 160.995 132.444 1.00 54.71 N
ATOM 18 C4 C A2660 17.027 160.180 132.952 1.00 55.33 C
ATOM 19 N4 C A2660 16.648 159.121 132.226 1.00 54.44 N
ATOM 20 C5 C A2660 16.434 160.416 134.226 1.00 55.28 C
ATOM 21 C6 C A2660 16.822 161.510 134.898 1.00 55.21 C
ATOM 22 P C A2661 14.356 166.397 135.168 1.00 60.21 P
ATOM 23 OP1 C A2661 13.906 167.679 135.752 1.00 60.19 O
ATOM 24 OP2 C A2661 13.447 165.217 135.164 1.00 59.45 O
ATOM 25 O5' C A2661 14.943 166.610 133.701 1.00 60.56 O
TER
ATOM 1 P G B2507 19.947 158.404 120.801 1.00 72.03 P
ATOM 2 OP1 G B2507 20.988 158.521 119.746 1.00 71.46 O
ATOM 3 OP2 G B2507 19.777 157.114 121.526 1.00 71.58 O
ATOM 4 O5' G B2507 20.224 159.565 121.865 1.00 70.98 O
ATOM 5 C5' G B2507 20.521 160.919 121.435 1.00 67.36 C
ATOM 6 C4' G B2507 20.545 161.855 122.616 1.00 65.44 C
ATOM 7 O4' G B2507 19.383 161.592 123.434 1.00 64.97 O
ATOM 8 C3' G B2507 21.667 161.644 123.616 1.00 64.26 C
ATOM 9 O3' G B2507 22.899 162.217 123.183 1.00 63.64 O
ATOM 10 C2' G B2507 21.132 162.359 124.850 1.00 64.07 C
ATOM 11 O2' G B2507 21.274 163.762 124.778 1.00 62.59 O
ATOM 12 C1' G B2507 19.642 162.029 124.762 1.00 64.17 C
ATOM 13 N9 G B2507 19.187 161.007 125.702 1.00 63.36 N
ATOM 14 C8 G B2507 18.726 159.754 125.391 1.00 63.40 C
ATOM 15 N7 G B2507 18.387 159.059 126.442 1.00 63.34 N
ATOM 16 C5 G B2507 18.641 159.899 127.516 1.00 62.34 C
ATOM 17 C6 G B2507 18.460 159.686 128.912 1.00 61.56 C
ATOM 18 O6 G B2507 18.023 158.684 129.488 1.00 59.66 O
ATOM 19 N1 G B2507 18.843 160.798 129.654 1.00 60.65 N
ATOM 20 C2 G B2507 19.324 161.967 129.124 1.00 61.73 C
ATOM 21 N2 G B2507 19.645 162.919 130.007 1.00 62.30 N
ATOM 22 N3 G B2507 19.482 162.187 127.824 1.00 62.35 N
ATOM 23 C4 G B2507 19.129 161.111 127.083 1.00 62.55 C
ATOM 24 P U B2508 24.282 161.638 123.761 1.00 61.87 P
ATOM 25 OP1 U B2508 25.422 162.119 122.939 1.00 58.50 O
ATOM 26 OP2 U B2508 24.068 160.181 123.950 1.00 62.17 O
ATOM 27 O5' U B2508 24.389 162.288 125.209 1.00 61.02 O
TER
Atoms:
C2: (18.354,162.088,133.143)
OP1: (14.280,161.727,139.662)
OP2: (14.643,160.126,137.696)
C4: (17.027,160.180,132.952)
O5': (15.542,162.439,137.607)
C3': (16.236,164.735,135.828)
C1': (18.157,163.586,135.112)
O4': (17.986,163.353,136.501)
C5': (16.210,163.605,138.128)
P: (15.143,161.222,138.563)
O2: (19.236,162.847,132.718)
C4': (17.018,164.286,137.046)
C2': (17.318,164.814,134.764)
O2': (18.110,165.970,134.936)
N1: (17.760,162.362,134.383)
N3: (17.958,160.995,132.444)
N4: (16.648,159.121,132.226)
C6: (16.822,161.510,134.898)
C5: (16.434,160.416,134.226)
O3': (15.626,165.996,136.039)
OP1: (14.280,161.727,139.662)
OP2: (14.643,160.126,137.696)
C4: (17.027,160.180,132.952)
O5': (15.542,162.439,137.607)
C3': (16.236,164.735,135.828)
C1': (18.157,163.586,135.112)
O4': (17.986,163.353,136.501)
C5': (16.210,163.605,138.128)
P: (15.143,161.222,138.563)
O2: (19.236,162.847,132.718)
C4': (17.018,164.286,137.046)
C2': (17.318,164.814,134.764)
O2': (18.110,165.970,134.936)
N1: (17.760,162.362,134.383)
N3: (17.958,160.995,132.444)
N4: (16.648,159.121,132.226)
C6: (16.822,161.510,134.898)
C5: (16.434,160.416,134.226)
O3': (15.626,165.996,136.039)
OP1: (20.988,158.521,119.746)
OP2: (19.777,157.114,121.526)
C3': (21.667,161.644,123.616)
C1': (19.642,162.029,124.762)
C5': (20.521,160.919,121.435)
O6: (18.023,158.684,129.488)
O4': (19.383,161.592,123.434)
C8: (18.726,159.754,125.391)
C2: (19.324,161.967,129.124)
C6: (18.460,159.686,128.912)
C5: (18.641,159.899,127.516)
C4: (19.129,161.111,127.083)
P: (19.947,158.404,120.801)
C4': (20.545,161.855,122.616)
C2': (21.132,162.359,124.850)
O2': (21.274,163.762,124.778)
N1: (18.843,160.798,129.654)
N2: (19.645,162.919,130.007)
N3: (19.482,162.187,127.824)
N7: (18.387,159.059,126.442)
N9: (19.187,161.007,125.702)
O5': (20.224,159.565,121.865)
O3': (22.899,162.217,123.183)
OP2: (19.777,157.114,121.526)
C3': (21.667,161.644,123.616)
C1': (19.642,162.029,124.762)
C5': (20.521,160.919,121.435)
O6: (18.023,158.684,129.488)
O4': (19.383,161.592,123.434)
C8: (18.726,159.754,125.391)
C2: (19.324,161.967,129.124)
C6: (18.460,159.686,128.912)
C5: (18.641,159.899,127.516)
C4: (19.129,161.111,127.083)
P: (19.947,158.404,120.801)
C4': (20.545,161.855,122.616)
C2': (21.132,162.359,124.850)
O2': (21.274,163.762,124.778)
N1: (18.843,160.798,129.654)
N2: (19.645,162.919,130.007)
N3: (19.482,162.187,127.824)
N7: (18.387,159.059,126.442)
N9: (19.187,161.007,125.702)
O5': (20.224,159.565,121.865)
O3': (22.899,162.217,123.183)
Image (generated by PyMOL):