ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:0928:0930

Extra

PDB:
ATOM 1 O3' G A 927 30.378 64.610 77.749 1.00 59.72 O
ATOM 2 P G A 928 31.155 64.575 79.159 1.00 61.64 P
ATOM 3 OP1 G A 928 32.596 64.373 78.852 1.00 61.29 O
ATOM 4 OP2 G A 928 30.465 63.634 80.079 1.00 62.64 O
ATOM 5 O5' G A 928 30.948 66.039 79.757 1.00 59.70 O
ATOM 6 C5' G A 928 31.519 67.191 79.104 1.00 58.55 C
ATOM 7 C4' G A 928 31.258 68.438 79.912 1.00 56.71 C
ATOM 8 O4' G A 928 29.829 68.646 80.019 1.00 56.39 O
ATOM 9 C3' G A 928 31.740 68.413 81.354 1.00 55.80 C
ATOM 10 O3' G A 928 33.132 68.728 81.435 1.00 56.14 O
ATOM 11 C2' G A 928 30.859 69.474 82.001 1.00 54.96 C
ATOM 12 O2' G A 928 31.309 70.784 81.741 1.00 55.76 O
ATOM 13 C1' G A 928 29.537 69.272 81.256 1.00 55.13 C
ATOM 14 N9 G A 928 28.541 68.476 81.970 1.00 53.97 N
ATOM 15 C8 G A 928 28.236 67.149 81.782 1.00 52.11 C
ATOM 16 N7 G A 928 27.288 66.726 82.576 1.00 53.44 N
ATOM 17 C5 G A 928 26.945 67.840 83.332 1.00 53.59 C
ATOM 18 C6 G A 928 25.981 67.994 84.375 1.00 54.83 C
ATOM 19 O6 G A 928 25.209 67.151 84.844 1.00 56.44 O
ATOM 20 N1 G A 928 25.978 69.288 84.881 1.00 54.51 N
ATOM 21 C2 G A 928 26.792 70.304 84.448 1.00 52.29 C
ATOM 22 N2 G A 928 26.641 71.477 85.067 1.00 49.62 N
ATOM 23 N3 G A 928 27.686 70.177 83.482 1.00 50.70 N
ATOM 24 C4 G A 928 27.711 68.927 82.975 1.00 53.01 C
ATOM 25 P U A 929 34.045 68.064 82.585 1.00 56.35 P
ATOM 26 OP1 U A 929 35.454 68.445 82.345 1.00 58.22 O
ATOM 27 OP2 U A 929 33.695 66.632 82.701 1.00 55.41 O
ATOM 28 O5' U A 929 33.559 68.795 83.912 1.00 56.61 O
TER

ATOM 1 O3' U B 929 33.524 70.977 87.601 1.00 58.45 O
ATOM 2 P A B 930 34.845 71.745 88.082 1.00 57.71 P
ATOM 3 OP1 A B 930 35.389 72.508 86.934 1.00 58.19 O
ATOM 4 OP2 A B 930 35.703 70.758 88.778 1.00 57.78 O
ATOM 5 O5' A B 930 34.273 72.782 89.141 1.00 56.02 O
ATOM 6 C5' A B 930 35.056 73.885 89.596 1.00 53.89 C
ATOM 7 C4' A B 930 34.217 74.777 90.473 1.00 52.99 C
ATOM 8 O4' A B 930 33.149 75.365 89.686 1.00 52.97 O
ATOM 9 C3' A B 930 33.489 74.071 91.600 1.00 50.66 C
ATOM 10 O3' A B 930 34.314 73.848 92.721 1.00 50.39 O
ATOM 11 C2' A B 930 32.362 75.041 91.899 1.00 53.33 C
ATOM 12 O2' A B 930 32.764 76.136 92.696 1.00 53.51 O
ATOM 13 C1' A B 930 31.982 75.487 90.483 1.00 53.94 C
ATOM 14 N9 A B 930 30.959 74.604 89.919 1.00 58.05 N
ATOM 15 C8 A B 930 31.038 73.234 89.740 1.00 59.08 C
ATOM 16 N7 A B 930 29.950 72.701 89.245 1.00 59.04 N
ATOM 17 C5 A B 930 29.102 73.785 89.073 1.00 60.82 C
ATOM 18 C6 A B 930 27.796 73.879 88.587 1.00 61.77 C
ATOM 19 N6 A B 930 27.109 72.831 88.151 1.00 63.45 N
ATOM 20 N1 A B 930 27.216 75.099 88.561 1.00 63.30 N
ATOM 21 C2 A B 930 27.929 76.154 88.990 1.00 63.61 C
ATOM 22 N3 A B 930 29.176 76.194 89.461 1.00 61.23 N
ATOM 23 C4 A B 930 29.711 74.963 89.479 1.00 59.41 C
ATOM 24 P G B 931 34.167 72.487 93.557 1.00 50.68 P
ATOM 25 OP1 G B 931 35.089 72.569 94.722 1.00 51.86 O
ATOM 26 OP2 G B 931 34.287 71.351 92.610 1.00 49.46 O
ATOM 27 O5' G B 931 32.682 72.550 94.122 1.00 51.36 O
TER

Atoms:
OP1: (32.596,64.373,78.852)
OP2: (30.465,63.634,80.079)
C3': (31.740,68.413,81.354)
C1': (29.537,69.272,81.256)
C5': (31.519,67.191,79.104)
O6: (25.209,67.151,84.844)
O4': (29.829,68.646,80.019)
C8: (28.236,67.149,81.782)
C2: (26.792,70.304,84.448)
C6: (25.981,67.994,84.375)
C5: (26.945,67.840,83.332)
C4: (27.711,68.927,82.975)
P: (31.155,64.575,79.159)
C4': (31.258,68.438,79.912)
C2': (30.859,69.474,82.001)
O2': (31.309,70.784,81.741)
N1: (25.978,69.288,84.881)
N2: (26.641,71.477,85.067)
N3: (27.686,70.177,83.482)
N7: (27.288,66.726,82.576)
N9: (28.541,68.476,81.970)
O5': (30.948,66.039,79.757)
O3': (33.132,68.728,81.435)
OP1: (35.389,72.508,86.934)
OP2: (35.703,70.758,88.778)
C3': (33.489,74.071,91.600)
C1': (31.982,75.487,90.483)
C5': (35.056,73.885,89.596)
O4': (33.149,75.365,89.686)
C8: (31.038,73.234,89.740)
O2': (32.764,76.136,92.696)
C6: (27.796,73.879,88.587)
C5: (29.102,73.785,89.073)
C4: (29.711,74.963,89.479)
P: (34.845,71.745,88.082)
C4': (34.217,74.777,90.473)
C2': (32.362,75.041,91.899)
C2: (27.929,76.154,88.990)
N1: (27.216,75.099,88.561)
N3: (29.176,76.194,89.461)
N6: (27.109,72.831,88.151)
N7: (29.950,72.701,89.245)
N9: (30.959,74.604,89.919)
O5': (34.273,72.782,89.141)
O3': (34.314,73.848,92.721)
Image (generated by PyMOL):
PyMOL image
show in jmol