ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0928:0930

Extra

PDB:
ATOM 1 O3' G A 927 30.530 64.059 77.680 1.00 49.68 O
ATOM 2 P G A 928 31.308 64.006 79.090 1.00 53.65 P
ATOM 3 OP1 G A 928 32.735 63.754 78.790 1.00 51.22 O
ATOM 4 OP2 G A 928 30.583 63.093 80.016 1.00 55.47 O
ATOM 5 O5' G A 928 31.150 65.478 79.684 1.00 53.62 O
ATOM 6 C5' G A 928 31.700 66.618 78.997 1.00 52.12 C
ATOM 7 C4' G A 928 31.450 67.882 79.786 1.00 51.05 C
ATOM 8 O4' G A 928 30.023 68.129 79.881 1.00 50.54 O
ATOM 9 C3' G A 928 31.924 67.874 81.230 1.00 50.52 C
ATOM 10 O3' G A 928 33.316 68.172 81.308 1.00 50.01 O
ATOM 11 C2' G A 928 31.062 68.967 81.850 1.00 50.01 C
ATOM 12 O2' G A 928 31.531 70.257 81.524 1.00 49.65 O
ATOM 13 C1' G A 928 29.730 68.751 81.124 1.00 50.59 C
ATOM 14 N9 G A 928 28.774 67.913 81.850 1.00 50.27 N
ATOM 15 C8 G A 928 28.514 66.581 81.633 1.00 48.71 C
ATOM 16 N7 G A 928 27.604 66.101 82.434 1.00 49.50 N
ATOM 17 C5 G A 928 27.240 67.177 83.232 1.00 48.66 C
ATOM 18 C6 G A 928 26.298 67.255 84.300 1.00 49.52 C
ATOM 19 O6 G A 928 25.580 66.355 84.765 1.00 48.88 O
ATOM 20 N1 G A 928 26.243 68.537 84.841 1.00 48.08 N
ATOM 21 C2 G A 928 26.994 69.605 84.412 1.00 47.71 C
ATOM 22 N2 G A 928 26.786 70.768 85.050 1.00 42.98 N
ATOM 23 N3 G A 928 27.882 69.540 83.426 1.00 47.43 N
ATOM 24 C4 G A 928 27.951 68.305 82.887 1.00 47.81 C
ATOM 25 P U A 929 34.225 67.480 82.439 1.00 50.32 P
ATOM 26 OP1 U A 929 35.630 67.820 82.145 1.00 51.81 O
ATOM 27 OP2 U A 929 33.832 66.054 82.564 1.00 50.59 O
ATOM 28 O5' U A 929 33.798 68.230 83.773 1.00 46.88 O
TER

ATOM 1 O3' U B 929 33.822 70.463 87.430 1.00 50.22 O
ATOM 2 P A B 930 35.134 71.262 87.878 1.00 49.85 P
ATOM 3 OP1 A B 930 35.652 72.008 86.700 1.00 49.02 O
ATOM 4 OP2 A B 930 36.009 70.293 88.576 1.00 49.41 O
ATOM 5 O5' A B 930 34.553 72.304 88.933 1.00 48.25 O
ATOM 6 C5' A B 930 35.347 73.391 89.421 1.00 44.70 C
ATOM 7 C4' A B 930 34.537 74.224 90.382 1.00 44.34 C
ATOM 8 O4' A B 930 33.442 74.859 89.670 1.00 42.71 O
ATOM 9 C3' A B 930 33.855 73.446 91.493 1.00 43.45 C
ATOM 10 O3' A B 930 34.720 73.182 92.579 1.00 43.92 O
ATOM 11 C2' A B 930 32.713 74.368 91.880 1.00 45.49 C
ATOM 12 O2' A B 930 33.104 75.403 92.752 1.00 46.77 O
ATOM 13 C1' A B 930 32.302 74.922 90.509 1.00 46.49 C
ATOM 14 N9 A B 930 31.249 74.104 89.904 1.00 50.24 N
ATOM 15 C8 A B 930 31.247 72.739 89.688 1.00 51.57 C
ATOM 16 N7 A B 930 30.130 72.286 89.169 1.00 52.19 N
ATOM 17 C5 A B 930 29.353 73.425 89.020 1.00 54.23 C
ATOM 18 C6 A B 930 28.059 73.615 88.532 1.00 55.82 C
ATOM 19 N6 A B 930 27.298 72.629 88.075 1.00 57.09 N
ATOM 20 N1 A B 930 27.565 74.873 88.530 1.00 59.90 N
ATOM 21 C2 A B 930 28.343 75.869 88.986 1.00 59.54 C
ATOM 22 N3 A B 930 29.586 75.815 89.465 1.00 55.94 N
ATOM 23 C4 A B 930 30.035 74.551 89.459 1.00 52.67 C
ATOM 24 P G B 931 34.521 71.844 93.444 1.00 44.91 P
ATOM 25 OP1 G B 931 35.459 71.883 94.597 1.00 46.85 O
ATOM 26 OP2 G B 931 34.569 70.705 92.494 1.00 43.54 O
ATOM 27 O5' G B 931 33.045 71.968 94.020 1.00 44.84 O
TER

Atoms:
OP1: (32.735,63.754,78.790)
OP2: (30.583,63.093,80.016)
C3': (31.924,67.874,81.230)
C1': (29.730,68.751,81.124)
C5': (31.700,66.618,78.997)
O6: (25.580,66.355,84.765)
O4': (30.023,68.129,79.881)
C8: (28.514,66.581,81.633)
C2: (26.994,69.605,84.412)
C6: (26.298,67.255,84.300)
C5: (27.240,67.177,83.232)
C4: (27.951,68.305,82.887)
P: (31.308,64.006,79.090)
C4': (31.450,67.882,79.786)
C2': (31.062,68.967,81.850)
O2': (31.531,70.257,81.524)
N1: (26.243,68.537,84.841)
N2: (26.786,70.768,85.050)
N3: (27.882,69.540,83.426)
N7: (27.604,66.101,82.434)
N9: (28.774,67.913,81.850)
O5': (31.150,65.478,79.684)
O3': (33.316,68.172,81.308)
OP1: (35.652,72.008,86.700)
OP2: (36.009,70.293,88.576)
C3': (33.855,73.446,91.493)
C1': (32.302,74.922,90.509)
C5': (35.347,73.391,89.421)
O4': (33.442,74.859,89.670)
C8: (31.247,72.739,89.688)
O2': (33.104,75.403,92.752)
C6: (28.059,73.615,88.532)
C5: (29.353,73.425,89.020)
C4: (30.035,74.551,89.459)
P: (35.134,71.262,87.878)
C4': (34.537,74.224,90.382)
C2': (32.713,74.368,91.880)
C2: (28.343,75.869,88.986)
N1: (27.565,74.873,88.530)
N3: (29.586,75.815,89.465)
N6: (27.298,72.629,88.075)
N7: (30.130,72.286,89.169)
N9: (31.249,74.104,89.904)
O5': (34.553,72.304,88.933)
O3': (34.720,73.182,92.579)
Image (generated by PyMOL):
PyMOL image
show in jmol