ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0928:0930

Extra

PDB:
ATOM 1 O3' G A 927 30.439 63.945 77.470 1.00 57.30 O
ATOM 2 P G A 928 31.242 63.845 78.860 1.00 59.85 P
ATOM 3 OP1 G A 928 32.662 63.581 78.504 1.00 58.11 O
ATOM 4 OP2 G A 928 30.535 62.921 79.783 1.00 60.79 O
ATOM 5 O5' G A 928 31.109 65.304 79.491 1.00 60.57 O
ATOM 6 C5' G A 928 31.642 66.461 78.813 1.00 58.24 C
ATOM 7 C4' G A 928 31.367 67.711 79.613 1.00 56.47 C
ATOM 8 O4' G A 928 29.936 67.916 79.724 1.00 55.65 O
ATOM 9 C3' G A 928 31.849 67.704 81.055 1.00 56.31 C
ATOM 10 O3' G A 928 33.236 68.027 81.128 1.00 56.67 O
ATOM 11 C2' G A 928 30.971 68.778 81.685 1.00 55.05 C
ATOM 12 O2' G A 928 31.417 70.074 81.361 1.00 55.16 O
ATOM 13 C1' G A 928 29.642 68.551 80.960 1.00 55.14 C
ATOM 14 N9 G A 928 28.671 67.735 81.690 1.00 54.38 N
ATOM 15 C8 G A 928 28.385 66.408 81.474 1.00 53.48 C
ATOM 16 N7 G A 928 27.456 65.949 82.267 1.00 54.53 N
ATOM 17 C5 G A 928 27.109 67.033 83.062 1.00 53.08 C
ATOM 18 C6 G A 928 26.160 67.133 84.124 1.00 54.05 C
ATOM 19 O6 G A 928 25.419 66.251 84.589 1.00 52.91 O
ATOM 20 N1 G A 928 26.129 68.418 84.660 1.00 53.24 N
ATOM 21 C2 G A 928 26.912 69.467 84.239 1.00 52.14 C
ATOM 22 N2 G A 928 26.727 70.636 84.877 1.00 48.56 N
ATOM 23 N3 G A 928 27.806 69.380 83.262 1.00 51.02 N
ATOM 24 C4 G A 928 27.850 68.145 82.722 1.00 52.07 C
ATOM 25 P U A 929 34.167 67.335 82.243 1.00 57.29 P
ATOM 26 OP1 U A 929 35.564 67.706 81.943 1.00 59.91 O
ATOM 27 OP2 U A 929 33.809 65.901 82.358 1.00 58.16 O
ATOM 28 O5' U A 929 33.740 68.066 83.585 1.00 55.23 O
TER

ATOM 1 O3' U B 929 33.761 70.299 87.259 1.00 59.49 O
ATOM 2 P A B 930 35.075 71.103 87.707 1.00 58.78 P
ATOM 3 OP1 A B 930 35.605 71.829 86.522 1.00 58.67 O
ATOM 4 OP2 A B 930 35.949 70.149 88.431 1.00 58.81 O
ATOM 5 O5' A B 930 34.481 72.165 88.734 1.00 56.11 O
ATOM 6 C5' A B 930 35.282 73.233 89.249 1.00 52.12 C
ATOM 7 C4' A B 930 34.469 74.059 90.210 1.00 50.69 C
ATOM 8 O4' A B 930 33.375 74.688 89.495 1.00 48.48 O
ATOM 9 C3' A B 930 33.781 73.274 91.313 1.00 49.45 C
ATOM 10 O3' A B 930 34.636 73.013 92.408 1.00 48.88 O
ATOM 11 C2' A B 930 32.642 74.198 91.702 1.00 50.15 C
ATOM 12 O2' A B 930 33.050 75.227 92.574 1.00 49.81 O
ATOM 13 C1' A B 930 32.234 74.753 90.333 1.00 51.79 C
ATOM 14 N9 A B 930 31.176 73.943 89.724 1.00 56.29 N
ATOM 15 C8 A B 930 31.177 72.587 89.457 1.00 56.47 C
ATOM 16 N7 A B 930 30.053 72.147 88.944 1.00 56.81 N
ATOM 17 C5 A B 930 29.265 73.286 88.856 1.00 59.29 C
ATOM 18 C6 A B 930 27.959 73.487 88.403 1.00 60.42 C
ATOM 19 N6 A B 930 27.195 72.516 87.919 1.00 62.19 N
ATOM 20 N1 A B 930 27.457 74.741 88.462 1.00 64.45 N
ATOM 21 C2 A B 930 28.239 75.724 88.940 1.00 63.84 C
ATOM 22 N3 A B 930 29.490 75.659 89.391 1.00 61.13 N
ATOM 23 C4 A B 930 29.948 74.398 89.325 1.00 58.01 C
ATOM 24 P G B 931 34.455 71.660 93.254 1.00 50.58 P
ATOM 25 OP1 G B 931 35.393 71.722 94.414 1.00 52.24 O
ATOM 26 OP2 G B 931 34.546 70.526 92.297 1.00 46.48 O
ATOM 27 O5' G B 931 32.974 71.752 93.831 1.00 48.37 O
TER

Atoms:
OP1: (32.662,63.581,78.504)
OP2: (30.535,62.921,79.783)
C3': (31.849,67.704,81.055)
C1': (29.642,68.551,80.960)
C5': (31.642,66.461,78.813)
O6: (25.419,66.251,84.589)
O4': (29.936,67.916,79.724)
C8: (28.385,66.408,81.474)
C2: (26.912,69.467,84.239)
C6: (26.160,67.133,84.124)
C5: (27.109,67.033,83.062)
C4: (27.850,68.145,82.722)
P: (31.242,63.845,78.860)
C4': (31.367,67.711,79.613)
C2': (30.971,68.778,81.685)
O2': (31.417,70.074,81.361)
N1: (26.129,68.418,84.660)
N2: (26.727,70.636,84.877)
N3: (27.806,69.380,83.262)
N7: (27.456,65.949,82.267)
N9: (28.671,67.735,81.690)
O5': (31.109,65.304,79.491)
O3': (33.236,68.027,81.128)
OP1: (35.605,71.829,86.522)
OP2: (35.949,70.149,88.431)
C3': (33.781,73.274,91.313)
C1': (32.234,74.753,90.333)
C5': (35.282,73.233,89.249)
O4': (33.375,74.688,89.495)
C8: (31.177,72.587,89.457)
O2': (33.050,75.227,92.574)
C6: (27.959,73.487,88.403)
C5: (29.265,73.286,88.856)
C4: (29.948,74.398,89.325)
P: (35.075,71.103,87.707)
C4': (34.469,74.059,90.210)
C2': (32.642,74.198,91.702)
C2: (28.239,75.724,88.940)
N1: (27.457,74.741,88.462)
N3: (29.490,75.659,89.391)
N6: (27.195,72.516,87.919)
N7: (30.053,72.147,88.944)
N9: (31.176,73.943,89.724)
O5': (34.481,72.165,88.734)
O3': (34.636,73.013,92.408)
Image (generated by PyMOL):
PyMOL image
show in jmol