ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0928:0930

Extra

PDB:
ATOM 1 O3' G A 927 30.513 64.096 77.559 1.00 55.99 O
ATOM 2 P G A 928 31.329 64.044 78.944 1.00 58.60 P
ATOM 3 OP1 G A 928 32.751 63.832 78.580 1.00 57.65 O
ATOM 4 OP2 G A 928 30.666 63.100 79.883 1.00 58.71 O
ATOM 5 O5' G A 928 31.153 65.510 79.553 1.00 59.21 O
ATOM 6 C5' G A 928 31.696 66.665 78.879 1.00 56.58 C
ATOM 7 C4' G A 928 31.438 67.917 79.683 1.00 54.15 C
ATOM 8 O4' G A 928 30.011 68.143 79.798 1.00 53.39 O
ATOM 9 C3' G A 928 31.926 67.899 81.121 1.00 53.96 C
ATOM 10 O3' G A 928 33.318 68.203 81.195 1.00 54.17 O
ATOM 11 C2' G A 928 31.062 68.975 81.762 1.00 52.84 C
ATOM 12 O2' G A 928 31.514 70.265 81.429 1.00 51.87 O
ATOM 13 C1' G A 928 29.723 68.750 81.051 1.00 53.89 C
ATOM 14 N9 G A 928 28.777 67.899 81.777 1.00 53.96 N
ATOM 15 C8 G A 928 28.531 66.566 81.554 1.00 54.32 C
ATOM 16 N7 G A 928 27.619 66.072 82.349 1.00 55.50 N
ATOM 17 C5 G A 928 27.241 67.140 83.152 1.00 54.28 C
ATOM 18 C6 G A 928 26.293 67.202 84.219 1.00 55.05 C
ATOM 19 O6 G A 928 25.580 66.292 84.679 1.00 54.45 O
ATOM 20 N1 G A 928 26.226 68.481 84.764 1.00 53.87 N
ATOM 21 C2 G A 928 26.970 69.558 84.346 1.00 52.48 C
ATOM 22 N2 G A 928 26.752 70.714 84.998 1.00 48.44 N
ATOM 23 N3 G A 928 27.860 69.508 83.362 1.00 51.74 N
ATOM 24 C4 G A 928 27.944 68.278 82.815 1.00 52.83 C
ATOM 25 P U A 929 34.230 67.515 82.328 1.00 53.78 P
ATOM 26 OP1 U A 929 35.631 67.897 82.069 1.00 56.98 O
ATOM 27 OP2 U A 929 33.871 66.073 82.419 1.00 55.08 O
ATOM 28 O5' U A 929 33.764 68.242 83.658 1.00 52.16 O
TER

ATOM 1 O3' U B 929 33.810 70.531 87.297 1.00 55.07 O
ATOM 2 P A B 930 35.145 71.259 87.800 1.00 53.77 P
ATOM 3 OP1 A B 930 35.689 72.036 86.654 1.00 52.95 O
ATOM 4 OP2 A B 930 35.994 70.235 88.469 1.00 52.56 O
ATOM 5 O5' A B 930 34.591 72.273 88.893 1.00 50.46 O
ATOM 6 C5' A B 930 35.394 73.346 89.385 1.00 46.68 C
ATOM 7 C4' A B 930 34.585 74.197 90.324 1.00 46.02 C
ATOM 8 O4' A B 930 33.499 74.822 89.597 1.00 45.03 O
ATOM 9 C3' A B 930 33.887 73.431 91.431 1.00 45.83 C
ATOM 10 O3' A B 930 34.740 73.171 92.522 1.00 45.94 O
ATOM 11 C2' A B 930 32.754 74.366 91.807 1.00 47.00 C
ATOM 12 O2' A B 930 33.161 75.410 92.657 1.00 47.31 O
ATOM 13 C1' A B 930 32.353 74.903 90.430 1.00 48.90 C
ATOM 14 N9 A B 930 31.299 74.076 89.840 1.00 53.83 N
ATOM 15 C8 A B 930 31.293 72.709 89.631 1.00 54.45 C
ATOM 16 N7 A B 930 30.173 72.257 89.120 1.00 55.00 N
ATOM 17 C5 A B 930 29.395 73.397 88.975 1.00 57.38 C
ATOM 18 C6 A B 930 28.097 73.590 88.495 1.00 58.49 C
ATOM 19 N6 A B 930 27.332 72.604 88.043 1.00 60.15 N
ATOM 20 N1 A B 930 27.607 74.848 88.492 1.00 62.32 N
ATOM 21 C2 A B 930 28.392 75.846 88.937 1.00 62.70 C
ATOM 22 N3 A B 930 29.637 75.791 89.408 1.00 59.29 N
ATOM 23 C4 A B 930 30.082 74.524 89.404 1.00 56.63 C
ATOM 24 P G B 931 34.536 71.839 93.383 1.00 46.69 P
ATOM 25 OP1 G B 931 35.452 71.906 94.557 1.00 49.80 O
ATOM 26 OP2 G B 931 34.632 70.692 92.443 1.00 45.06 O
ATOM 27 O5' G B 931 33.042 71.955 93.916 1.00 48.09 O
TER

Atoms:
OP1: (32.751,63.832,78.580)
OP2: (30.666,63.100,79.883)
C3': (31.926,67.899,81.121)
C1': (29.723,68.750,81.051)
C5': (31.696,66.665,78.879)
O6: (25.580,66.292,84.679)
O4': (30.011,68.143,79.798)
C8: (28.531,66.566,81.554)
C2: (26.970,69.558,84.346)
C6: (26.293,67.202,84.219)
C5: (27.241,67.140,83.152)
C4: (27.944,68.278,82.815)
P: (31.329,64.044,78.944)
C4': (31.438,67.917,79.683)
C2': (31.062,68.975,81.762)
O2': (31.514,70.265,81.429)
N1: (26.226,68.481,84.764)
N2: (26.752,70.714,84.998)
N3: (27.860,69.508,83.362)
N7: (27.619,66.072,82.349)
N9: (28.777,67.899,81.777)
O5': (31.153,65.510,79.553)
O3': (33.318,68.203,81.195)
OP1: (35.689,72.036,86.654)
OP2: (35.994,70.235,88.469)
C3': (33.887,73.431,91.431)
C1': (32.353,74.903,90.430)
C5': (35.394,73.346,89.385)
O4': (33.499,74.822,89.597)
C8: (31.293,72.709,89.631)
O2': (33.161,75.410,92.657)
C6: (28.097,73.590,88.495)
C5: (29.395,73.397,88.975)
C4: (30.082,74.524,89.404)
P: (35.145,71.259,87.800)
C4': (34.585,74.197,90.324)
C2': (32.754,74.366,91.807)
C2: (28.392,75.846,88.937)
N1: (27.607,74.848,88.492)
N3: (29.637,75.791,89.408)
N6: (27.332,72.604,88.043)
N7: (30.173,72.257,89.120)
N9: (31.299,74.076,89.840)
O5': (34.591,72.273,88.893)
O3': (34.740,73.171,92.522)
Image (generated by PyMOL):
PyMOL image
show in jmol