ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:0928:0930

Extra

PDB:
ATOM 1 O3' G A 927 30.592 64.174 77.653 1.00 45.22 O
ATOM 2 P G A 928 31.408 64.137 79.043 1.00 47.48 P
ATOM 3 OP1 G A 928 32.840 63.955 78.688 1.00 46.70 O
ATOM 4 OP2 G A 928 30.760 63.181 79.979 1.00 45.27 O
ATOM 5 O5' G A 928 31.216 65.603 79.647 1.00 46.35 O
ATOM 6 C5' G A 928 31.793 66.752 78.998 1.00 42.38 C
ATOM 7 C4' G A 928 31.533 68.005 79.803 1.00 41.56 C
ATOM 8 O4' G A 928 30.106 68.259 79.879 1.00 41.22 O
ATOM 9 C3' G A 928 31.990 67.996 81.252 1.00 40.71 C
ATOM 10 O3' G A 928 33.380 68.299 81.343 1.00 40.19 O
ATOM 11 C2' G A 928 31.121 69.092 81.858 1.00 39.76 C
ATOM 12 O2' G A 928 31.584 70.379 81.518 1.00 38.93 O
ATOM 13 C1' G A 928 29.799 68.875 81.118 1.00 39.53 C
ATOM 14 N9 G A 928 28.837 68.034 81.827 1.00 40.33 N
ATOM 15 C8 G A 928 28.572 66.704 81.594 1.00 40.33 C
ATOM 16 N7 G A 928 27.648 66.221 82.381 1.00 41.72 N
ATOM 17 C5 G A 928 27.277 67.294 83.182 1.00 40.00 C
ATOM 18 C6 G A 928 26.323 67.369 84.238 1.00 40.52 C
ATOM 19 O6 G A 928 25.590 66.472 84.686 1.00 41.85 O
ATOM 20 N1 G A 928 26.278 68.643 84.793 1.00 38.02 N
ATOM 21 C2 G A 928 27.056 69.702 84.397 1.00 37.37 C
ATOM 22 N2 G A 928 26.883 70.846 85.073 1.00 31.77 N
ATOM 23 N3 G A 928 27.944 69.645 83.416 1.00 37.57 N
ATOM 24 C4 G A 928 28.003 68.420 82.858 1.00 39.16 C
ATOM 25 P U A 929 34.280 67.624 82.494 1.00 42.78 P
ATOM 26 OP1 U A 929 35.697 67.954 82.202 1.00 43.20 O
ATOM 27 OP2 U A 929 33.885 66.201 82.662 1.00 40.68 O
ATOM 28 O5' U A 929 33.847 68.401 83.809 1.00 40.55 O
TER

ATOM 1 O3' U B 929 33.832 70.731 87.399 1.00 43.84 O
ATOM 2 P A B 930 35.177 71.447 87.894 1.00 43.21 P
ATOM 3 OP1 A B 930 35.719 72.263 86.778 1.00 42.29 O
ATOM 4 OP2 A B 930 36.023 70.400 88.514 1.00 42.91 O
ATOM 5 O5' A B 930 34.642 72.421 89.034 1.00 42.38 O
ATOM 6 C5' A B 930 35.418 73.533 89.499 1.00 39.40 C
ATOM 7 C4' A B 930 34.571 74.418 90.381 1.00 38.80 C
ATOM 8 O4' A B 930 33.504 75.011 89.593 1.00 38.74 O
ATOM 9 C3' A B 930 33.838 73.707 91.505 1.00 36.34 C
ATOM 10 O3' A B 930 34.656 73.482 92.629 1.00 35.34 O
ATOM 11 C2' A B 930 32.703 74.669 91.803 1.00 38.61 C
ATOM 12 O2' A B 930 33.087 75.761 92.604 1.00 39.99 O
ATOM 13 C1' A B 930 32.335 75.130 90.389 1.00 40.55 C
ATOM 14 N9 A B 930 31.312 74.250 89.826 1.00 44.23 N
ATOM 15 C8 A B 930 31.375 72.880 89.645 1.00 44.68 C
ATOM 16 N7 A B 930 30.271 72.358 89.171 1.00 45.02 N
ATOM 17 C5 A B 930 29.433 73.453 89.009 1.00 46.69 C
ATOM 18 C6 A B 930 28.123 73.563 88.547 1.00 47.96 C
ATOM 19 N6 A B 930 27.408 72.525 88.138 1.00 49.13 N
ATOM 20 N1 A B 930 27.564 74.794 88.518 1.00 51.04 N
ATOM 21 C2 A B 930 28.300 75.841 88.929 1.00 50.94 C
ATOM 22 N3 A B 930 29.552 75.863 89.384 1.00 47.52 N
ATOM 23 C4 A B 930 30.065 74.624 89.400 1.00 45.61 C
ATOM 24 P G B 931 34.533 72.102 93.432 1.00 36.29 P
ATOM 25 OP1 G B 931 35.517 72.131 94.547 1.00 38.42 O
ATOM 26 OP2 G B 931 34.590 71.003 92.439 1.00 35.32 O
ATOM 27 O5' G B 931 33.073 72.162 94.061 1.00 35.62 O
TER

Atoms:
OP1: (32.840,63.955,78.688)
OP2: (30.760,63.181,79.979)
C3': (31.990,67.996,81.252)
C1': (29.799,68.875,81.118)
C5': (31.793,66.752,78.998)
O6: (25.590,66.472,84.686)
O4': (30.106,68.259,79.879)
C8: (28.572,66.704,81.594)
C2: (27.056,69.702,84.397)
C6: (26.323,67.369,84.238)
C5: (27.277,67.294,83.182)
C4: (28.003,68.420,82.858)
P: (31.408,64.137,79.043)
C4': (31.533,68.005,79.803)
C2': (31.121,69.092,81.858)
O2': (31.584,70.379,81.518)
N1: (26.278,68.643,84.793)
N2: (26.883,70.846,85.073)
N3: (27.944,69.645,83.416)
N7: (27.648,66.221,82.381)
N9: (28.837,68.034,81.827)
O5': (31.216,65.603,79.647)
O3': (33.380,68.299,81.343)
OP1: (35.719,72.263,86.778)
OP2: (36.023,70.400,88.514)
C3': (33.838,73.707,91.505)
C1': (32.335,75.130,90.389)
C5': (35.418,73.533,89.499)
O4': (33.504,75.011,89.593)
C8: (31.375,72.880,89.645)
O2': (33.087,75.761,92.604)
C6: (28.123,73.563,88.547)
C5: (29.433,73.453,89.009)
C4: (30.065,74.624,89.400)
P: (35.177,71.447,87.894)
C4': (34.571,74.418,90.381)
C2': (32.703,74.669,91.803)
C2: (28.300,75.841,88.929)
N1: (27.564,74.794,88.518)
N3: (29.552,75.863,89.384)
N6: (27.408,72.525,88.138)
N7: (30.271,72.358,89.171)
N9: (31.312,74.250,89.826)
O5': (34.642,72.421,89.034)
O3': (34.656,73.482,92.629)
Image (generated by PyMOL):
PyMOL image
show in jmol