Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0928:0930
Extra
PDB:
ATOM 1 O3' G A 927 30.470 64.797 77.909 1.00 46.67 O
ATOM 2 P G A 928 31.217 64.789 79.339 1.00 49.97 P
ATOM 3 OP1 G A 928 32.662 64.520 79.088 1.00 47.22 O
ATOM 4 OP2 G A 928 30.468 63.927 80.288 1.00 49.98 O
ATOM 5 O5' G A 928 31.045 66.282 79.876 1.00 49.65 O
ATOM 6 C5' G A 928 31.593 67.405 79.155 1.00 46.55 C
ATOM 7 C4' G A 928 31.315 68.690 79.901 1.00 45.13 C
ATOM 8 O4' G A 928 29.883 68.924 79.973 1.00 44.60 O
ATOM 9 C3' G A 928 31.776 68.721 81.347 1.00 42.50 C
ATOM 10 O3' G A 928 33.163 69.038 81.411 1.00 42.43 O
ATOM 11 C2' G A 928 30.883 69.804 81.943 1.00 42.48 C
ATOM 12 O2' G A 928 31.314 71.114 81.650 1.00 41.44 O
ATOM 13 C1' G A 928 29.567 69.563 81.197 1.00 42.28 C
ATOM 14 N9 G A 928 28.619 68.727 81.927 1.00 43.04 N
ATOM 15 C8 G A 928 28.351 67.395 81.717 1.00 44.09 C
ATOM 16 N7 G A 928 27.453 66.920 82.538 1.00 44.92 N
ATOM 17 C5 G A 928 27.106 68.001 83.335 1.00 43.58 C
ATOM 18 C6 G A 928 26.193 68.089 84.418 1.00 44.24 C
ATOM 19 O6 G A 928 25.484 67.199 84.902 1.00 46.90 O
ATOM 20 N1 G A 928 26.159 69.371 84.955 1.00 42.79 N
ATOM 21 C2 G A 928 26.915 70.428 84.514 1.00 41.24 C
ATOM 22 N2 G A 928 26.759 71.574 85.168 1.00 38.59 N
ATOM 23 N3 G A 928 27.766 70.360 83.507 1.00 41.52 N
ATOM 24 C4 G A 928 27.814 69.125 82.969 1.00 42.67 C
ATOM 25 P U A 929 34.106 68.328 82.504 1.00 43.91 P
ATOM 26 OP1 U A 929 35.507 68.666 82.180 1.00 45.23 O
ATOM 27 OP2 U A 929 33.719 66.906 82.632 1.00 44.54 O
ATOM 28 O5' U A 929 33.726 69.067 83.858 1.00 43.23 O
TER
ATOM 1 O3' U B 929 33.732 71.273 87.536 1.00 45.90 O
ATOM 2 P A B 930 35.047 72.075 87.979 1.00 45.52 P
ATOM 3 OP1 A B 930 35.520 72.866 86.811 1.00 45.10 O
ATOM 4 OP2 A B 930 35.963 71.106 88.631 1.00 45.07 O
ATOM 5 O5' A B 930 34.484 73.072 89.083 1.00 43.07 O
ATOM 6 C5' A B 930 35.283 74.137 89.598 1.00 41.42 C
ATOM 7 C4' A B 930 34.431 75.060 90.429 1.00 40.86 C
ATOM 8 O4' A B 930 33.374 75.611 89.599 1.00 41.77 O
ATOM 9 C3' A B 930 33.680 74.392 91.563 1.00 39.03 C
ATOM 10 O3' A B 930 34.480 74.169 92.702 1.00 37.66 O
ATOM 11 C2' A B 930 32.539 75.364 91.805 1.00 41.71 C
ATOM 12 O2' A B 930 32.886 76.494 92.576 1.00 40.18 O
ATOM 13 C1' A B 930 32.191 75.759 90.367 1.00 42.34 C
ATOM 14 N9 A B 930 31.185 74.846 89.825 1.00 45.25 N
ATOM 15 C8 A B 930 31.273 73.475 89.681 1.00 46.21 C
ATOM 16 N7 A B 930 30.181 72.921 89.214 1.00 46.71 N
ATOM 17 C5 A B 930 29.326 73.996 89.021 1.00 48.78 C
ATOM 18 C6 A B 930 28.017 74.071 88.547 1.00 50.06 C
ATOM 19 N6 A B 930 27.327 73.009 88.157 1.00 53.25 N
ATOM 20 N1 A B 930 27.436 75.289 88.484 1.00 51.59 N
ATOM 21 C2 A B 930 28.148 76.358 88.877 1.00 52.16 C
ATOM 22 N3 A B 930 29.397 76.415 89.339 1.00 49.19 N
ATOM 23 C4 A B 930 29.934 75.187 89.387 1.00 46.99 C
ATOM 24 P G B 931 34.405 72.751 93.445 1.00 39.24 P
ATOM 25 OP1 G B 931 35.445 72.705 94.507 1.00 39.44 O
ATOM 26 OP2 G B 931 34.390 71.699 92.394 1.00 37.87 O
ATOM 27 O5' G B 931 32.973 72.778 94.140 1.00 38.87 O
TER
ATOM 2 P G A 928 31.217 64.789 79.339 1.00 49.97 P
ATOM 3 OP1 G A 928 32.662 64.520 79.088 1.00 47.22 O
ATOM 4 OP2 G A 928 30.468 63.927 80.288 1.00 49.98 O
ATOM 5 O5' G A 928 31.045 66.282 79.876 1.00 49.65 O
ATOM 6 C5' G A 928 31.593 67.405 79.155 1.00 46.55 C
ATOM 7 C4' G A 928 31.315 68.690 79.901 1.00 45.13 C
ATOM 8 O4' G A 928 29.883 68.924 79.973 1.00 44.60 O
ATOM 9 C3' G A 928 31.776 68.721 81.347 1.00 42.50 C
ATOM 10 O3' G A 928 33.163 69.038 81.411 1.00 42.43 O
ATOM 11 C2' G A 928 30.883 69.804 81.943 1.00 42.48 C
ATOM 12 O2' G A 928 31.314 71.114 81.650 1.00 41.44 O
ATOM 13 C1' G A 928 29.567 69.563 81.197 1.00 42.28 C
ATOM 14 N9 G A 928 28.619 68.727 81.927 1.00 43.04 N
ATOM 15 C8 G A 928 28.351 67.395 81.717 1.00 44.09 C
ATOM 16 N7 G A 928 27.453 66.920 82.538 1.00 44.92 N
ATOM 17 C5 G A 928 27.106 68.001 83.335 1.00 43.58 C
ATOM 18 C6 G A 928 26.193 68.089 84.418 1.00 44.24 C
ATOM 19 O6 G A 928 25.484 67.199 84.902 1.00 46.90 O
ATOM 20 N1 G A 928 26.159 69.371 84.955 1.00 42.79 N
ATOM 21 C2 G A 928 26.915 70.428 84.514 1.00 41.24 C
ATOM 22 N2 G A 928 26.759 71.574 85.168 1.00 38.59 N
ATOM 23 N3 G A 928 27.766 70.360 83.507 1.00 41.52 N
ATOM 24 C4 G A 928 27.814 69.125 82.969 1.00 42.67 C
ATOM 25 P U A 929 34.106 68.328 82.504 1.00 43.91 P
ATOM 26 OP1 U A 929 35.507 68.666 82.180 1.00 45.23 O
ATOM 27 OP2 U A 929 33.719 66.906 82.632 1.00 44.54 O
ATOM 28 O5' U A 929 33.726 69.067 83.858 1.00 43.23 O
TER
ATOM 1 O3' U B 929 33.732 71.273 87.536 1.00 45.90 O
ATOM 2 P A B 930 35.047 72.075 87.979 1.00 45.52 P
ATOM 3 OP1 A B 930 35.520 72.866 86.811 1.00 45.10 O
ATOM 4 OP2 A B 930 35.963 71.106 88.631 1.00 45.07 O
ATOM 5 O5' A B 930 34.484 73.072 89.083 1.00 43.07 O
ATOM 6 C5' A B 930 35.283 74.137 89.598 1.00 41.42 C
ATOM 7 C4' A B 930 34.431 75.060 90.429 1.00 40.86 C
ATOM 8 O4' A B 930 33.374 75.611 89.599 1.00 41.77 O
ATOM 9 C3' A B 930 33.680 74.392 91.563 1.00 39.03 C
ATOM 10 O3' A B 930 34.480 74.169 92.702 1.00 37.66 O
ATOM 11 C2' A B 930 32.539 75.364 91.805 1.00 41.71 C
ATOM 12 O2' A B 930 32.886 76.494 92.576 1.00 40.18 O
ATOM 13 C1' A B 930 32.191 75.759 90.367 1.00 42.34 C
ATOM 14 N9 A B 930 31.185 74.846 89.825 1.00 45.25 N
ATOM 15 C8 A B 930 31.273 73.475 89.681 1.00 46.21 C
ATOM 16 N7 A B 930 30.181 72.921 89.214 1.00 46.71 N
ATOM 17 C5 A B 930 29.326 73.996 89.021 1.00 48.78 C
ATOM 18 C6 A B 930 28.017 74.071 88.547 1.00 50.06 C
ATOM 19 N6 A B 930 27.327 73.009 88.157 1.00 53.25 N
ATOM 20 N1 A B 930 27.436 75.289 88.484 1.00 51.59 N
ATOM 21 C2 A B 930 28.148 76.358 88.877 1.00 52.16 C
ATOM 22 N3 A B 930 29.397 76.415 89.339 1.00 49.19 N
ATOM 23 C4 A B 930 29.934 75.187 89.387 1.00 46.99 C
ATOM 24 P G B 931 34.405 72.751 93.445 1.00 39.24 P
ATOM 25 OP1 G B 931 35.445 72.705 94.507 1.00 39.44 O
ATOM 26 OP2 G B 931 34.390 71.699 92.394 1.00 37.87 O
ATOM 27 O5' G B 931 32.973 72.778 94.140 1.00 38.87 O
TER
Atoms:
OP1: (32.662,64.520,79.088)
OP2: (30.468,63.927,80.288)
C3': (31.776,68.721,81.347)
C1': (29.567,69.563,81.197)
C5': (31.593,67.405,79.155)
O6: (25.484,67.199,84.902)
O4': (29.883,68.924,79.973)
C8: (28.351,67.395,81.717)
C2: (26.915,70.428,84.514)
C6: (26.193,68.089,84.418)
C5: (27.106,68.001,83.335)
C4: (27.814,69.125,82.969)
P: (31.217,64.789,79.339)
C4': (31.315,68.690,79.901)
C2': (30.883,69.804,81.943)
O2': (31.314,71.114,81.650)
N1: (26.159,69.371,84.955)
N2: (26.759,71.574,85.168)
N3: (27.766,70.360,83.507)
N7: (27.453,66.920,82.538)
N9: (28.619,68.727,81.927)
O5': (31.045,66.282,79.876)
O3': (33.163,69.038,81.411)
OP2: (30.468,63.927,80.288)
C3': (31.776,68.721,81.347)
C1': (29.567,69.563,81.197)
C5': (31.593,67.405,79.155)
O6: (25.484,67.199,84.902)
O4': (29.883,68.924,79.973)
C8: (28.351,67.395,81.717)
C2: (26.915,70.428,84.514)
C6: (26.193,68.089,84.418)
C5: (27.106,68.001,83.335)
C4: (27.814,69.125,82.969)
P: (31.217,64.789,79.339)
C4': (31.315,68.690,79.901)
C2': (30.883,69.804,81.943)
O2': (31.314,71.114,81.650)
N1: (26.159,69.371,84.955)
N2: (26.759,71.574,85.168)
N3: (27.766,70.360,83.507)
N7: (27.453,66.920,82.538)
N9: (28.619,68.727,81.927)
O5': (31.045,66.282,79.876)
O3': (33.163,69.038,81.411)
OP1: (35.520,72.866,86.811)
OP2: (35.963,71.106,88.631)
C3': (33.680,74.392,91.563)
C1': (32.191,75.759,90.367)
C5': (35.283,74.137,89.598)
O4': (33.374,75.611,89.599)
C8: (31.273,73.475,89.681)
O2': (32.886,76.494,92.576)
C6: (28.017,74.071,88.547)
C5: (29.326,73.996,89.021)
C4: (29.934,75.187,89.387)
P: (35.047,72.075,87.979)
C4': (34.431,75.060,90.429)
C2': (32.539,75.364,91.805)
C2: (28.148,76.358,88.877)
N1: (27.436,75.289,88.484)
N3: (29.397,76.415,89.339)
N6: (27.327,73.009,88.157)
N7: (30.181,72.921,89.214)
N9: (31.185,74.846,89.825)
O5': (34.484,73.072,89.083)
O3': (34.480,74.169,92.702)
OP2: (35.963,71.106,88.631)
C3': (33.680,74.392,91.563)
C1': (32.191,75.759,90.367)
C5': (35.283,74.137,89.598)
O4': (33.374,75.611,89.599)
C8: (31.273,73.475,89.681)
O2': (32.886,76.494,92.576)
C6: (28.017,74.071,88.547)
C5: (29.326,73.996,89.021)
C4: (29.934,75.187,89.387)
P: (35.047,72.075,87.979)
C4': (34.431,75.060,90.429)
C2': (32.539,75.364,91.805)
C2: (28.148,76.358,88.877)
N1: (27.436,75.289,88.484)
N3: (29.397,76.415,89.339)
N6: (27.327,73.009,88.157)
N7: (30.181,72.921,89.214)
N9: (31.185,74.846,89.825)
O5': (34.484,73.072,89.083)
O3': (34.480,74.169,92.702)
Image (generated by PyMOL):