ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0928:0930

Extra

PDB:
ATOM 1 O3' G A 927 30.515 64.809 77.795 1.00 59.85 O
ATOM 2 P G A 928 31.249 64.765 79.231 1.00 61.49 P
ATOM 3 OP1 G A 928 32.696 64.569 78.949 1.00 59.60 O
ATOM 4 OP2 G A 928 30.544 63.819 80.133 1.00 62.56 O
ATOM 5 O5' G A 928 31.041 66.234 79.812 1.00 59.16 O
ATOM 6 C5' G A 928 31.599 67.366 79.122 1.00 57.16 C
ATOM 7 C4' G A 928 31.347 68.636 79.890 1.00 54.61 C
ATOM 8 O4' G A 928 29.924 68.891 79.964 1.00 53.51 O
ATOM 9 C3' G A 928 31.823 68.649 81.331 1.00 52.44 C
ATOM 10 O3' G A 928 33.214 68.972 81.371 1.00 51.51 O
ATOM 11 C2' G A 928 30.943 69.732 81.944 1.00 52.07 C
ATOM 12 O2' G A 928 31.406 71.036 81.661 1.00 51.72 O
ATOM 13 C1' G A 928 29.620 69.506 81.201 1.00 52.15 C
ATOM 14 N9 G A 928 28.677 68.644 81.902 1.00 51.37 N
ATOM 15 C8 G A 928 28.462 67.307 81.682 1.00 51.08 C
ATOM 16 N7 G A 928 27.543 66.804 82.458 1.00 51.44 N
ATOM 17 C5 G A 928 27.129 67.874 83.237 1.00 50.50 C
ATOM 18 C6 G A 928 26.166 67.932 84.270 1.00 50.72 C
ATOM 19 O6 G A 928 25.459 67.018 84.714 1.00 51.14 O
ATOM 20 N1 G A 928 26.073 69.210 84.808 1.00 49.33 N
ATOM 21 C2 G A 928 26.815 70.289 84.403 1.00 48.81 C
ATOM 22 N2 G A 928 26.584 71.438 85.036 1.00 46.85 N
ATOM 23 N3 G A 928 27.718 70.245 83.444 1.00 49.74 N
ATOM 24 C4 G A 928 27.822 69.015 82.909 1.00 50.25 C
ATOM 25 P U A 929 34.164 68.314 82.484 1.00 49.72 P
ATOM 26 OP1 U A 929 35.538 68.733 82.178 1.00 50.34 O
ATOM 27 OP2 U A 929 33.858 66.871 82.633 1.00 51.74 O
ATOM 28 O5' U A 929 33.706 69.032 83.821 1.00 51.74 O
TER

ATOM 1 O3' U B 929 33.733 71.177 87.511 1.00 54.49 O
ATOM 2 P A B 930 35.051 72.000 87.915 1.00 54.82 P
ATOM 3 OP1 A B 930 35.395 72.931 86.809 1.00 53.37 O
ATOM 4 OP2 A B 930 36.064 71.036 88.409 1.00 52.94 O
ATOM 5 O5' A B 930 34.567 72.884 89.141 1.00 52.73 O
ATOM 6 C5' A B 930 35.329 74.008 89.576 1.00 48.66 C
ATOM 7 C4' A B 930 34.454 74.943 90.357 1.00 47.62 C
ATOM 8 O4' A B 930 33.387 75.427 89.501 1.00 47.80 O
ATOM 9 C3' A B 930 33.699 74.310 91.504 1.00 45.79 C
ATOM 10 O3' A B 930 34.498 74.085 92.637 1.00 44.62 O
ATOM 11 C2' A B 930 32.573 75.300 91.723 1.00 47.13 C
ATOM 12 O2' A B 930 32.962 76.462 92.432 1.00 45.59 O
ATOM 13 C1' A B 930 32.216 75.632 90.273 1.00 47.79 C
ATOM 14 N9 A B 930 31.191 74.721 89.773 1.00 51.19 N
ATOM 15 C8 A B 930 31.260 73.351 89.625 1.00 52.20 C
ATOM 16 N7 A B 930 30.151 72.810 89.189 1.00 51.90 N
ATOM 17 C5 A B 930 29.300 73.894 89.026 1.00 53.73 C
ATOM 18 C6 A B 930 27.972 73.986 88.598 1.00 55.71 C
ATOM 19 N6 A B 930 27.248 72.931 88.233 1.00 58.48 N
ATOM 20 N1 A B 930 27.404 75.213 88.560 1.00 56.96 N
ATOM 21 C2 A B 930 28.143 76.271 88.931 1.00 57.81 C
ATOM 22 N3 A B 930 29.407 76.312 89.351 1.00 54.95 N
ATOM 23 C4 A B 930 29.931 75.076 89.376 1.00 53.20 C
ATOM 24 P G B 931 34.426 72.660 93.356 1.00 46.27 P
ATOM 25 OP1 G B 931 35.454 72.578 94.429 1.00 46.21 O
ATOM 26 OP2 G B 931 34.421 71.644 92.275 1.00 47.24 O
ATOM 27 O5' G B 931 32.977 72.671 94.015 1.00 46.44 O
TER

Atoms:
OP1: (32.696,64.569,78.949)
OP2: (30.544,63.819,80.133)
C3': (31.823,68.649,81.331)
C1': (29.620,69.506,81.201)
C5': (31.599,67.366,79.122)
O6: (25.459,67.018,84.714)
O4': (29.924,68.891,79.964)
C8: (28.462,67.307,81.682)
C2: (26.815,70.289,84.403)
C6: (26.166,67.932,84.270)
C5: (27.129,67.874,83.237)
C4: (27.822,69.015,82.909)
P: (31.249,64.765,79.231)
C4': (31.347,68.636,79.890)
C2': (30.943,69.732,81.944)
O2': (31.406,71.036,81.661)
N1: (26.073,69.210,84.808)
N2: (26.584,71.438,85.036)
N3: (27.718,70.245,83.444)
N7: (27.543,66.804,82.458)
N9: (28.677,68.644,81.902)
O5': (31.041,66.234,79.812)
O3': (33.214,68.972,81.371)
OP1: (35.395,72.931,86.809)
OP2: (36.064,71.036,88.409)
C3': (33.699,74.310,91.504)
C1': (32.216,75.632,90.273)
C5': (35.329,74.008,89.576)
O4': (33.387,75.427,89.501)
C8: (31.260,73.351,89.625)
O2': (32.962,76.462,92.432)
C6: (27.972,73.986,88.598)
C5: (29.300,73.894,89.026)
C4: (29.931,75.076,89.376)
P: (35.051,72.000,87.915)
C4': (34.454,74.943,90.357)
C2': (32.573,75.300,91.723)
C2: (28.143,76.271,88.931)
N1: (27.404,75.213,88.560)
N3: (29.407,76.312,89.351)
N6: (27.248,72.931,88.233)
N7: (30.151,72.810,89.189)
N9: (31.191,74.721,89.773)
O5': (34.567,72.884,89.141)
O3': (34.498,74.085,92.637)
Image (generated by PyMOL):
PyMOL image
show in jmol