ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0928:0930

Extra

PDB:
ATOM 1 O3' G A 927 30.357 64.674 77.792 1.00 48.27 O
ATOM 2 P G A 928 31.140 64.746 79.201 1.00 50.21 P
ATOM 3 OP1 G A 928 32.587 64.607 78.911 1.00 50.71 O
ATOM 4 OP2 G A 928 30.501 63.819 80.170 1.00 50.36 O
ATOM 5 O5' G A 928 30.865 66.226 79.723 1.00 49.19 O
ATOM 6 C5' G A 928 31.396 67.367 79.023 1.00 47.87 C
ATOM 7 C4' G A 928 31.189 68.623 79.832 1.00 45.77 C
ATOM 8 O4' G A 928 29.776 68.920 79.930 1.00 45.38 O
ATOM 9 C3' G A 928 31.672 68.555 81.267 1.00 44.24 C
ATOM 10 O3' G A 928 33.066 68.834 81.313 1.00 44.11 O
ATOM 11 C2' G A 928 30.826 69.624 81.948 1.00 44.25 C
ATOM 12 O2' G A 928 31.320 70.929 81.742 1.00 43.04 O
ATOM 13 C1' G A 928 29.497 69.484 81.199 1.00 44.61 C
ATOM 14 N9 G A 928 28.515 68.632 81.861 1.00 44.24 N
ATOM 15 C8 G A 928 28.217 67.326 81.556 1.00 45.19 C
ATOM 16 N7 G A 928 27.280 66.826 82.312 1.00 46.04 N
ATOM 17 C5 G A 928 26.942 67.863 83.169 1.00 45.33 C
ATOM 18 C6 G A 928 25.988 67.914 84.220 1.00 45.51 C
ATOM 19 O6 G A 928 25.218 67.025 84.611 1.00 45.52 O
ATOM 20 N1 G A 928 25.983 69.156 84.840 1.00 43.96 N
ATOM 21 C2 G A 928 26.785 70.209 84.494 1.00 43.30 C
ATOM 22 N2 G A 928 26.628 71.319 85.204 1.00 43.57 N
ATOM 23 N3 G A 928 27.673 70.176 83.520 1.00 43.80 N
ATOM 24 C4 G A 928 27.700 68.981 82.905 1.00 43.96 C
ATOM 25 P U A 929 33.980 68.167 82.447 1.00 44.42 P
ATOM 26 OP1 U A 929 35.384 68.539 82.184 1.00 43.51 O
ATOM 27 OP2 U A 929 33.613 66.736 82.584 1.00 46.34 O
ATOM 28 O5' U A 929 33.516 68.910 83.767 1.00 44.44 O
TER

ATOM 1 O3' U B 929 33.608 71.155 87.409 1.00 43.75 O
ATOM 2 P A B 930 34.949 71.933 87.835 1.00 43.28 P
ATOM 3 OP1 A B 930 35.283 72.902 86.766 1.00 42.53 O
ATOM 4 OP2 A B 930 35.964 70.935 88.263 1.00 43.07 O
ATOM 5 O5' A B 930 34.484 72.755 89.112 1.00 39.81 O
ATOM 6 C5' A B 930 35.183 73.923 89.520 1.00 37.28 C
ATOM 7 C4' A B 930 34.273 74.806 90.322 1.00 37.42 C
ATOM 8 O4' A B 930 33.182 75.261 89.484 1.00 37.30 O
ATOM 9 C3' A B 930 33.563 74.122 91.468 1.00 37.67 C
ATOM 10 O3' A B 930 34.384 73.950 92.609 1.00 37.79 O
ATOM 11 C2' A B 930 32.381 75.048 91.711 1.00 39.62 C
ATOM 12 O2' A B 930 32.677 76.175 92.507 1.00 39.16 O
ATOM 13 C1' A B 930 32.029 75.459 90.277 1.00 38.27 C
ATOM 14 N9 A B 930 30.944 74.647 89.731 1.00 40.63 N
ATOM 15 C8 A B 930 30.900 73.289 89.489 1.00 40.81 C
ATOM 16 N7 A B 930 29.737 72.868 89.054 1.00 40.09 N
ATOM 17 C5 A B 930 28.975 74.026 88.984 1.00 43.40 C
ATOM 18 C6 A B 930 27.646 74.260 88.599 1.00 45.63 C
ATOM 19 N6 A B 930 26.825 73.304 88.188 1.00 47.25 N
ATOM 20 N1 A B 930 27.185 75.533 88.654 1.00 48.60 N
ATOM 21 C2 A B 930 28.021 76.500 89.067 1.00 48.51 C
ATOM 22 N3 A B 930 29.294 76.404 89.452 1.00 45.45 N
ATOM 23 C4 A B 930 29.711 75.128 89.387 1.00 42.85 C
ATOM 24 P G B 931 34.296 72.574 93.426 1.00 40.77 P
ATOM 25 OP1 G B 931 35.277 72.564 94.547 1.00 40.86 O
ATOM 26 OP2 G B 931 34.327 71.483 92.417 1.00 40.13 O
ATOM 27 O5' G B 931 32.831 72.623 94.039 1.00 39.45 O
TER

Atoms:
OP1: (32.587,64.607,78.911)
OP2: (30.501,63.819,80.170)
C3': (31.672,68.555,81.267)
C1': (29.497,69.484,81.199)
C5': (31.396,67.367,79.023)
O6: (25.218,67.025,84.611)
O4': (29.776,68.920,79.930)
C8: (28.217,67.326,81.556)
C2: (26.785,70.209,84.494)
C6: (25.988,67.914,84.220)
C5: (26.942,67.863,83.169)
C4: (27.700,68.981,82.905)
P: (31.140,64.746,79.201)
C4': (31.189,68.623,79.832)
C2': (30.826,69.624,81.948)
O2': (31.320,70.929,81.742)
N1: (25.983,69.156,84.840)
N2: (26.628,71.319,85.204)
N3: (27.673,70.176,83.520)
N7: (27.280,66.826,82.312)
N9: (28.515,68.632,81.861)
O5': (30.865,66.226,79.723)
O3': (33.066,68.834,81.313)
OP1: (35.283,72.902,86.766)
OP2: (35.964,70.935,88.263)
C3': (33.563,74.122,91.468)
C1': (32.029,75.459,90.277)
C5': (35.183,73.923,89.520)
O4': (33.182,75.261,89.484)
C8: (30.900,73.289,89.489)
O2': (32.677,76.175,92.507)
C6: (27.646,74.260,88.599)
C5: (28.975,74.026,88.984)
C4: (29.711,75.128,89.387)
P: (34.949,71.933,87.835)
C4': (34.273,74.806,90.322)
C2': (32.381,75.048,91.711)
C2: (28.021,76.500,89.067)
N1: (27.185,75.533,88.654)
N3: (29.294,76.404,89.452)
N6: (26.825,73.304,88.188)
N7: (29.737,72.868,89.054)
N9: (30.944,74.647,89.731)
O5': (34.484,72.755,89.112)
O3': (34.384,73.950,92.609)
Image (generated by PyMOL):
PyMOL image
show in jmol