ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:B31:B33

Extra

PDB:
ATOM 1 O3' C A 30 81.651 6.812 101.566 1.00 90.51 O
ATOM 2 P G A 31 83.044 7.507 101.174 1.00 91.44 P
ATOM 3 OP1 G A 31 84.127 6.598 101.655 1.00 91.38 O
ATOM 4 OP2 G A 31 82.995 8.909 101.663 1.00 91.17 O
ATOM 5 O5' G A 31 83.042 7.497 99.579 1.00 89.18 O
ATOM 6 C5' G A 31 82.962 6.257 98.859 1.00 88.54 C
ATOM 7 C4' G A 31 82.683 6.510 97.397 1.00 89.09 C
ATOM 8 O4' G A 31 81.420 7.211 97.230 1.00 88.88 O
ATOM 9 C3' G A 31 83.620 7.462 96.672 1.00 89.54 C
ATOM 10 O3' G A 31 84.884 6.864 96.413 1.00 91.61 O
ATOM 11 C2' G A 31 82.833 7.741 95.390 1.00 88.76 C
ATOM 12 O2' G A 31 82.961 6.717 94.422 1.00 88.09 O
ATOM 13 C1' G A 31 81.390 7.763 95.918 1.00 87.81 C
ATOM 14 N9 G A 31 80.792 9.096 95.953 1.00 85.74 N
ATOM 15 C8 G A 31 80.575 9.903 97.051 1.00 85.94 C
ATOM 16 N7 G A 31 80.051 11.059 96.740 1.00 85.39 N
ATOM 17 C5 G A 31 79.901 11.010 95.357 1.00 84.73 C
ATOM 18 C6 G A 31 79.392 11.981 94.451 1.00 83.90 C
ATOM 19 O6 G A 31 78.964 13.120 94.701 1.00 83.75 O
ATOM 20 N1 G A 31 79.421 11.519 93.136 1.00 82.40 N
ATOM 21 C2 G A 31 79.881 10.288 92.741 1.00 81.75 C
ATOM 22 N2 G A 31 79.821 10.029 91.428 1.00 80.68 N
ATOM 23 N3 G A 31 80.364 9.378 93.571 1.00 82.51 N
ATOM 24 C4 G A 31 80.345 9.804 94.857 1.00 84.42 C
ATOM 25 P U A 32 86.065 7.738 95.750 1.00 92.73 P
ATOM 26 OP1 U A 32 87.348 7.000 95.940 1.00 93.37 O
ATOM 27 OP2 U A 32 85.968 9.155 96.203 1.00 92.66 O
ATOM 28 O5' U A 32 85.720 7.668 94.200 1.00 91.71 O
TER

ATOM 1 O3' U B 32 86.715 8.718 89.647 1.00 89.54 O
ATOM 2 P A B 33 87.989 8.159 88.871 1.00 89.11 P
ATOM 3 OP1 A B 33 88.470 6.982 89.633 1.00 89.97 O
ATOM 4 OP2 A B 33 88.923 9.283 88.577 1.00 87.94 O
ATOM 5 O5' A B 33 87.370 7.632 87.513 1.00 88.00 O
ATOM 6 C5' A B 33 88.101 6.733 86.683 1.00 88.15 C
ATOM 7 C4' A B 33 87.328 6.488 85.426 1.00 88.12 C
ATOM 8 O4' A B 33 86.111 5.768 85.760 1.00 88.28 O
ATOM 9 C3' A B 33 86.853 7.769 84.762 1.00 87.59 C
ATOM 10 O3' A B 33 87.879 8.349 83.946 1.00 87.72 O
ATOM 11 C2' A B 33 85.600 7.307 84.028 1.00 87.38 C
ATOM 12 O2' A B 33 85.866 6.631 82.815 1.00 85.99 O
ATOM 13 C1' A B 33 85.019 6.316 85.042 1.00 87.83 C
ATOM 14 N9 A B 33 84.110 6.926 86.016 1.00 88.46 N
ATOM 15 C8 A B 33 84.392 7.325 87.311 1.00 88.38 C
ATOM 16 N7 A B 33 83.364 7.841 87.943 1.00 88.53 N
ATOM 17 C5 A B 33 82.335 7.780 87.007 1.00 88.61 C
ATOM 18 C6 A B 33 80.977 8.167 87.058 1.00 88.34 C
ATOM 19 N6 A B 33 80.400 8.707 88.135 1.00 87.85 N
ATOM 20 N1 A B 33 80.224 7.969 85.950 1.00 88.31 N
ATOM 21 C2 A B 33 80.798 7.409 84.872 1.00 88.32 C
ATOM 22 N3 A B 33 82.054 7.000 84.701 1.00 87.73 N
ATOM 23 C4 A B 33 82.782 7.218 85.815 1.00 88.32 C
ATOM 24 P C B 34 87.711 9.852 83.385 1.00 86.63 P
ATOM 25 OP1 C B 34 88.954 10.242 82.647 1.00 85.60 O
ATOM 26 OP2 C B 34 87.207 10.722 84.484 1.00 86.70 O
ATOM 27 O5' C B 34 86.566 9.668 82.300 1.00 83.24 O
TER

Atoms:
OP1: (84.127,6.598,101.655)
OP2: (82.995,8.909,101.663)
C3': (83.620,7.462,96.672)
C1': (81.390,7.763,95.918)
C5': (82.962,6.257,98.859)
O6: (78.964,13.120,94.701)
O4': (81.420,7.211,97.230)
C8: (80.575,9.903,97.051)
C2: (79.881,10.288,92.741)
C6: (79.392,11.981,94.451)
C5: (79.901,11.010,95.357)
C4: (80.345,9.804,94.857)
P: (83.044,7.507,101.174)
C4': (82.683,6.510,97.397)
C2': (82.833,7.741,95.390)
O2': (82.961,6.717,94.422)
N1: (79.421,11.519,93.136)
N2: (79.821,10.029,91.428)
N3: (80.364,9.378,93.571)
N7: (80.051,11.059,96.740)
N9: (80.792,9.096,95.953)
O5': (83.042,7.497,99.579)
O3': (84.884,6.864,96.413)
OP1: (88.470,6.982,89.633)
OP2: (88.923,9.283,88.577)
C3': (86.853,7.769,84.762)
C1': (85.019,6.316,85.042)
C5': (88.101,6.733,86.683)
O4': (86.111,5.768,85.760)
C8: (84.392,7.325,87.311)
O2': (85.866,6.631,82.815)
C6: (80.977,8.167,87.058)
C5: (82.335,7.780,87.007)
C4: (82.782,7.218,85.815)
P: (87.989,8.159,88.871)
C4': (87.328,6.488,85.426)
C2': (85.600,7.307,84.028)
C2: (80.798,7.409,84.872)
N1: (80.224,7.969,85.950)
N3: (82.054,7.000,84.701)
N6: (80.400,8.707,88.135)
N7: (83.364,7.841,87.943)
N9: (84.110,6.926,86.016)
O5': (87.370,7.632,87.513)
O3': (87.879,8.349,83.946)
Image (generated by PyMOL):
PyMOL image
show in jmol