Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1384:A1386
Extra
PDB:
ATOM 1 O3' A A1383 46.077 179.983 64.731 1.00 57.10 O
ATOM 2 P G A1384 45.537 179.608 66.181 1.00 59.87 P
ATOM 3 OP1 G A1384 44.248 180.309 66.350 1.00 61.08 O
ATOM 4 OP2 G A1384 46.628 179.821 67.174 1.00 59.22 O
ATOM 5 O5' G A1384 45.285 178.045 66.064 1.00 58.31 O
ATOM 6 C5' G A1384 45.186 177.240 67.234 1.00 58.00 C
ATOM 7 C4' G A1384 45.347 175.791 66.877 1.00 56.60 C
ATOM 8 O4' G A1384 46.592 175.578 66.168 1.00 56.34 O
ATOM 9 C3' G A1384 45.419 174.872 68.071 1.00 53.68 C
ATOM 10 O3' G A1384 44.088 174.592 68.467 1.00 52.42 O
ATOM 11 C2' G A1384 46.113 173.661 67.477 1.00 54.38 C
ATOM 12 O2' G A1384 45.181 172.949 66.687 1.00 54.17 O
ATOM 13 C1' G A1384 47.128 174.322 66.531 1.00 54.83 C
ATOM 14 N9 G A1384 48.453 174.572 67.087 1.00 54.15 N
ATOM 15 C8 G A1384 49.023 175.804 67.308 1.00 54.86 C
ATOM 16 N7 G A1384 50.234 175.734 67.780 1.00 53.94 N
ATOM 17 C5 G A1384 50.482 174.375 67.879 1.00 53.32 C
ATOM 18 C6 G A1384 51.638 173.695 68.312 1.00 52.77 C
ATOM 19 O6 G A1384 52.716 174.178 68.676 1.00 51.43 O
ATOM 20 N1 G A1384 51.457 172.316 68.291 1.00 52.60 N
ATOM 21 C2 G A1384 50.307 171.683 67.896 1.00 53.07 C
ATOM 22 N2 G A1384 50.298 170.352 67.996 1.00 52.71 N
ATOM 23 N3 G A1384 49.234 172.308 67.449 1.00 53.86 N
ATOM 24 C4 G A1384 49.386 173.644 67.473 1.00 53.65 C
ATOM 25 P C A1385 43.725 174.486 70.018 1.00 53.48 P
ATOM 26 OP1 C A1385 42.276 174.756 70.165 1.00 53.38 O
ATOM 27 OP2 C A1385 44.696 175.316 70.766 1.00 52.42 O
ATOM 28 O5' C A1385 44.017 172.956 70.350 1.00 55.85 O
TER
ATOM 1 O3' C B1385 43.825 168.908 71.533 1.00 59.08 O
ATOM 2 P A B1386 42.406 168.322 71.958 1.00 60.66 P
ATOM 3 OP1 A B1386 41.448 168.841 70.950 1.00 60.33 O
ATOM 4 OP2 A B1386 42.190 168.609 73.403 1.00 60.39 O
ATOM 5 O5' A B1386 42.659 166.762 71.761 1.00 60.39 O
ATOM 6 C5' A B1386 41.621 165.774 71.872 1.00 58.98 C
ATOM 7 C4' A B1386 41.989 164.575 71.030 1.00 57.23 C
ATOM 8 O4' A B1386 42.009 164.982 69.636 1.00 57.13 O
ATOM 9 C3' A B1386 43.394 164.043 71.246 1.00 56.06 C
ATOM 10 O3' A B1386 43.492 163.209 72.376 1.00 54.81 O
ATOM 11 C2' A B1386 43.664 163.330 69.934 1.00 56.08 C
ATOM 12 O2' A B1386 42.978 162.096 69.826 1.00 57.42 O
ATOM 13 C1' A B1386 43.080 164.341 68.954 1.00 55.89 C
ATOM 14 N9 A B1386 44.065 165.366 68.610 1.00 55.38 N
ATOM 15 C8 A B1386 43.976 166.718 68.849 1.00 56.40 C
ATOM 16 N7 A B1386 45.025 167.397 68.451 1.00 56.62 N
ATOM 17 C5 A B1386 45.867 166.429 67.915 1.00 54.27 C
ATOM 18 C6 A B1386 47.155 166.505 67.336 1.00 53.18 C
ATOM 19 N6 A B1386 47.853 167.641 67.212 1.00 52.09 N
ATOM 20 N1 A B1386 47.707 165.358 66.890 1.00 52.07 N
ATOM 21 C2 A B1386 47.016 164.220 67.030 1.00 51.64 C
ATOM 22 N3 A B1386 45.808 164.018 67.567 1.00 52.38 N
ATOM 23 C4 A B1386 45.282 165.175 67.995 1.00 54.07 C
ATOM 24 P C B1387 44.865 163.155 73.200 1.00 53.75 P
ATOM 25 OP1 C B1387 44.648 162.137 74.243 1.00 52.43 O
ATOM 26 OP2 C B1387 45.306 164.523 73.588 1.00 54.04 O
ATOM 27 O5' C B1387 45.902 162.557 72.160 1.00 50.61 O
TER
ATOM 2 P G A1384 45.537 179.608 66.181 1.00 59.87 P
ATOM 3 OP1 G A1384 44.248 180.309 66.350 1.00 61.08 O
ATOM 4 OP2 G A1384 46.628 179.821 67.174 1.00 59.22 O
ATOM 5 O5' G A1384 45.285 178.045 66.064 1.00 58.31 O
ATOM 6 C5' G A1384 45.186 177.240 67.234 1.00 58.00 C
ATOM 7 C4' G A1384 45.347 175.791 66.877 1.00 56.60 C
ATOM 8 O4' G A1384 46.592 175.578 66.168 1.00 56.34 O
ATOM 9 C3' G A1384 45.419 174.872 68.071 1.00 53.68 C
ATOM 10 O3' G A1384 44.088 174.592 68.467 1.00 52.42 O
ATOM 11 C2' G A1384 46.113 173.661 67.477 1.00 54.38 C
ATOM 12 O2' G A1384 45.181 172.949 66.687 1.00 54.17 O
ATOM 13 C1' G A1384 47.128 174.322 66.531 1.00 54.83 C
ATOM 14 N9 G A1384 48.453 174.572 67.087 1.00 54.15 N
ATOM 15 C8 G A1384 49.023 175.804 67.308 1.00 54.86 C
ATOM 16 N7 G A1384 50.234 175.734 67.780 1.00 53.94 N
ATOM 17 C5 G A1384 50.482 174.375 67.879 1.00 53.32 C
ATOM 18 C6 G A1384 51.638 173.695 68.312 1.00 52.77 C
ATOM 19 O6 G A1384 52.716 174.178 68.676 1.00 51.43 O
ATOM 20 N1 G A1384 51.457 172.316 68.291 1.00 52.60 N
ATOM 21 C2 G A1384 50.307 171.683 67.896 1.00 53.07 C
ATOM 22 N2 G A1384 50.298 170.352 67.996 1.00 52.71 N
ATOM 23 N3 G A1384 49.234 172.308 67.449 1.00 53.86 N
ATOM 24 C4 G A1384 49.386 173.644 67.473 1.00 53.65 C
ATOM 25 P C A1385 43.725 174.486 70.018 1.00 53.48 P
ATOM 26 OP1 C A1385 42.276 174.756 70.165 1.00 53.38 O
ATOM 27 OP2 C A1385 44.696 175.316 70.766 1.00 52.42 O
ATOM 28 O5' C A1385 44.017 172.956 70.350 1.00 55.85 O
TER
ATOM 1 O3' C B1385 43.825 168.908 71.533 1.00 59.08 O
ATOM 2 P A B1386 42.406 168.322 71.958 1.00 60.66 P
ATOM 3 OP1 A B1386 41.448 168.841 70.950 1.00 60.33 O
ATOM 4 OP2 A B1386 42.190 168.609 73.403 1.00 60.39 O
ATOM 5 O5' A B1386 42.659 166.762 71.761 1.00 60.39 O
ATOM 6 C5' A B1386 41.621 165.774 71.872 1.00 58.98 C
ATOM 7 C4' A B1386 41.989 164.575 71.030 1.00 57.23 C
ATOM 8 O4' A B1386 42.009 164.982 69.636 1.00 57.13 O
ATOM 9 C3' A B1386 43.394 164.043 71.246 1.00 56.06 C
ATOM 10 O3' A B1386 43.492 163.209 72.376 1.00 54.81 O
ATOM 11 C2' A B1386 43.664 163.330 69.934 1.00 56.08 C
ATOM 12 O2' A B1386 42.978 162.096 69.826 1.00 57.42 O
ATOM 13 C1' A B1386 43.080 164.341 68.954 1.00 55.89 C
ATOM 14 N9 A B1386 44.065 165.366 68.610 1.00 55.38 N
ATOM 15 C8 A B1386 43.976 166.718 68.849 1.00 56.40 C
ATOM 16 N7 A B1386 45.025 167.397 68.451 1.00 56.62 N
ATOM 17 C5 A B1386 45.867 166.429 67.915 1.00 54.27 C
ATOM 18 C6 A B1386 47.155 166.505 67.336 1.00 53.18 C
ATOM 19 N6 A B1386 47.853 167.641 67.212 1.00 52.09 N
ATOM 20 N1 A B1386 47.707 165.358 66.890 1.00 52.07 N
ATOM 21 C2 A B1386 47.016 164.220 67.030 1.00 51.64 C
ATOM 22 N3 A B1386 45.808 164.018 67.567 1.00 52.38 N
ATOM 23 C4 A B1386 45.282 165.175 67.995 1.00 54.07 C
ATOM 24 P C B1387 44.865 163.155 73.200 1.00 53.75 P
ATOM 25 OP1 C B1387 44.648 162.137 74.243 1.00 52.43 O
ATOM 26 OP2 C B1387 45.306 164.523 73.588 1.00 54.04 O
ATOM 27 O5' C B1387 45.902 162.557 72.160 1.00 50.61 O
TER
Atoms:
OP1: (44.248,180.309,66.350)
OP2: (46.628,179.821,67.174)
C3': (45.419,174.872,68.071)
C1': (47.128,174.322,66.531)
C5': (45.186,177.240,67.234)
O6: (52.716,174.178,68.676)
O4': (46.592,175.578,66.168)
C8: (49.023,175.804,67.308)
C2: (50.307,171.683,67.896)
C6: (51.638,173.695,68.312)
C5: (50.482,174.375,67.879)
C4: (49.386,173.644,67.473)
P: (45.537,179.608,66.181)
C4': (45.347,175.791,66.877)
C2': (46.113,173.661,67.477)
O2': (45.181,172.949,66.687)
N1: (51.457,172.316,68.291)
N2: (50.298,170.352,67.996)
N3: (49.234,172.308,67.449)
N7: (50.234,175.734,67.780)
N9: (48.453,174.572,67.087)
O5': (45.285,178.045,66.064)
O3': (44.088,174.592,68.467)
OP2: (46.628,179.821,67.174)
C3': (45.419,174.872,68.071)
C1': (47.128,174.322,66.531)
C5': (45.186,177.240,67.234)
O6: (52.716,174.178,68.676)
O4': (46.592,175.578,66.168)
C8: (49.023,175.804,67.308)
C2: (50.307,171.683,67.896)
C6: (51.638,173.695,68.312)
C5: (50.482,174.375,67.879)
C4: (49.386,173.644,67.473)
P: (45.537,179.608,66.181)
C4': (45.347,175.791,66.877)
C2': (46.113,173.661,67.477)
O2': (45.181,172.949,66.687)
N1: (51.457,172.316,68.291)
N2: (50.298,170.352,67.996)
N3: (49.234,172.308,67.449)
N7: (50.234,175.734,67.780)
N9: (48.453,174.572,67.087)
O5': (45.285,178.045,66.064)
O3': (44.088,174.592,68.467)
OP1: (41.448,168.841,70.950)
OP2: (42.190,168.609,73.403)
C3': (43.394,164.043,71.246)
C1': (43.080,164.341,68.954)
C5': (41.621,165.774,71.872)
O4': (42.009,164.982,69.636)
C8: (43.976,166.718,68.849)
O2': (42.978,162.096,69.826)
C6: (47.155,166.505,67.336)
C5: (45.867,166.429,67.915)
C4: (45.282,165.175,67.995)
P: (42.406,168.322,71.958)
C4': (41.989,164.575,71.030)
C2': (43.664,163.330,69.934)
C2: (47.016,164.220,67.030)
N1: (47.707,165.358,66.890)
N3: (45.808,164.018,67.567)
N6: (47.853,167.641,67.212)
N7: (45.025,167.397,68.451)
N9: (44.065,165.366,68.610)
O5': (42.659,166.762,71.761)
O3': (43.492,163.209,72.376)
OP2: (42.190,168.609,73.403)
C3': (43.394,164.043,71.246)
C1': (43.080,164.341,68.954)
C5': (41.621,165.774,71.872)
O4': (42.009,164.982,69.636)
C8: (43.976,166.718,68.849)
O2': (42.978,162.096,69.826)
C6: (47.155,166.505,67.336)
C5: (45.867,166.429,67.915)
C4: (45.282,165.175,67.995)
P: (42.406,168.322,71.958)
C4': (41.989,164.575,71.030)
C2': (43.664,163.330,69.934)
C2: (47.016,164.220,67.030)
N1: (47.707,165.358,66.890)
N3: (45.808,164.018,67.567)
N6: (47.853,167.641,67.212)
N7: (45.025,167.397,68.451)
N9: (44.065,165.366,68.610)
O5': (42.659,166.762,71.761)
O3': (43.492,163.209,72.376)
Image (generated by PyMOL):