ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:B31:B33

Extra

PDB:
ATOM 1 O3' C A 30 81.209 6.695 100.752 1.00 72.52 O
ATOM 2 P G A 31 82.600 7.404 100.386 1.00 74.21 P
ATOM 3 OP1 G A 31 83.672 6.496 100.877 1.00 74.53 O
ATOM 4 OP2 G A 31 82.543 8.805 100.888 1.00 74.72 O
ATOM 5 O5' G A 31 82.602 7.424 98.787 1.00 73.28 O
ATOM 6 C5' G A 31 82.528 6.194 98.037 1.00 72.94 C
ATOM 7 C4' G A 31 82.259 6.462 96.567 1.00 73.43 C
ATOM 8 O4' G A 31 80.994 7.148 96.387 1.00 73.68 O
ATOM 9 C3' G A 31 83.194 7.405 95.834 1.00 72.79 C
ATOM 10 O3' G A 31 84.427 6.768 95.551 1.00 74.50 O
ATOM 11 C2' G A 31 82.407 7.686 94.555 1.00 71.84 C
ATOM 12 O2' G A 31 82.523 6.639 93.612 1.00 70.82 O
ATOM 13 C1' G A 31 80.969 7.715 95.083 1.00 71.89 C
ATOM 14 N9 G A 31 80.368 9.048 95.133 1.00 70.39 N
ATOM 15 C8 G A 31 80.132 9.828 96.245 1.00 70.03 C
ATOM 16 N7 G A 31 79.579 10.976 95.957 1.00 69.13 N
ATOM 17 C5 G A 31 79.439 10.954 94.573 1.00 68.24 C
ATOM 18 C6 G A 31 78.902 11.926 93.687 1.00 66.89 C
ATOM 19 O6 G A 31 78.424 13.032 93.956 1.00 65.43 O
ATOM 20 N1 G A 31 78.960 11.499 92.365 1.00 65.43 N
ATOM 21 C2 G A 31 79.467 10.297 91.945 1.00 64.96 C
ATOM 22 N2 G A 31 79.434 10.073 90.626 1.00 63.47 N
ATOM 23 N3 G A 31 79.968 9.382 92.758 1.00 66.45 N
ATOM 24 C4 G A 31 79.923 9.774 94.050 1.00 68.38 C
ATOM 25 P U A 32 85.633 7.611 94.913 1.00 74.43 P
ATOM 26 OP1 U A 32 86.872 6.817 95.070 1.00 75.93 O
ATOM 27 OP2 U A 32 85.604 9.024 95.389 1.00 74.31 O
ATOM 28 O5' U A 32 85.297 7.597 93.366 1.00 73.79 O
TER

ATOM 1 O3' U B 32 86.290 8.668 88.861 1.00 72.89 O
ATOM 2 P A B 33 87.537 8.067 88.088 1.00 73.82 P
ATOM 3 OP1 A B 33 87.959 6.878 88.860 1.00 74.29 O
ATOM 4 OP2 A B 33 88.484 9.192 87.880 1.00 73.64 O
ATOM 5 O5' A B 33 86.935 7.595 86.697 1.00 73.13 O
ATOM 6 C5' A B 33 87.633 6.650 85.876 1.00 72.28 C
ATOM 7 C4' A B 33 86.847 6.403 84.624 1.00 71.66 C
ATOM 8 O4' A B 33 85.621 5.698 84.955 1.00 72.10 O
ATOM 9 C3' A B 33 86.381 7.689 83.972 1.00 70.45 C
ATOM 10 O3' A B 33 87.410 8.256 83.174 1.00 70.64 O
ATOM 11 C2' A B 33 85.135 7.243 83.223 1.00 70.51 C
ATOM 12 O2' A B 33 85.429 6.581 82.007 1.00 69.64 O
ATOM 13 C1' A B 33 84.534 6.257 84.231 1.00 70.68 C
ATOM 14 N9 A B 33 83.634 6.886 85.204 1.00 70.11 N
ATOM 15 C8 A B 33 83.937 7.310 86.480 1.00 68.95 C
ATOM 16 N7 A B 33 82.918 7.828 87.122 1.00 69.10 N
ATOM 17 C5 A B 33 81.872 7.743 86.212 1.00 68.73 C
ATOM 18 C6 A B 33 80.516 8.125 86.288 1.00 67.93 C
ATOM 19 N6 A B 33 79.958 8.692 87.363 1.00 66.59 N
ATOM 20 N1 A B 33 79.742 7.901 85.204 1.00 67.28 N
ATOM 21 C2 A B 33 80.299 7.333 84.123 1.00 67.42 C
ATOM 22 N3 A B 33 81.555 6.932 83.932 1.00 67.79 N
ATOM 23 C4 A B 33 82.299 7.168 85.026 1.00 68.90 C
ATOM 24 P C B 34 87.257 9.760 82.638 1.00 70.29 P
ATOM 25 OP1 C B 34 88.478 10.082 81.849 1.00 70.10 O
ATOM 26 OP2 C B 34 86.867 10.636 83.778 1.00 68.93 O
ATOM 27 O5' C B 34 86.039 9.617 81.626 1.00 67.63 O
TER

Atoms:
OP1: (83.672,6.496,100.877)
OP2: (82.543,8.805,100.888)
C3': (83.194,7.405,95.834)
C1': (80.969,7.715,95.083)
C5': (82.528,6.194,98.037)
O6: (78.424,13.032,93.956)
O4': (80.994,7.148,96.387)
C8: (80.132,9.828,96.245)
C2: (79.467,10.297,91.945)
C6: (78.902,11.926,93.687)
C5: (79.439,10.954,94.573)
C4: (79.923,9.774,94.050)
P: (82.600,7.404,100.386)
C4': (82.259,6.462,96.567)
C2': (82.407,7.686,94.555)
O2': (82.523,6.639,93.612)
N1: (78.960,11.499,92.365)
N2: (79.434,10.073,90.626)
N3: (79.968,9.382,92.758)
N7: (79.579,10.976,95.957)
N9: (80.368,9.048,95.133)
O5': (82.602,7.424,98.787)
O3': (84.427,6.768,95.551)
OP1: (87.959,6.878,88.860)
OP2: (88.484,9.192,87.880)
C3': (86.381,7.689,83.972)
C1': (84.534,6.257,84.231)
C5': (87.633,6.650,85.876)
O4': (85.621,5.698,84.955)
C8: (83.937,7.310,86.480)
O2': (85.429,6.581,82.007)
C6: (80.516,8.125,86.288)
C5: (81.872,7.743,86.212)
C4: (82.299,7.168,85.026)
P: (87.537,8.067,88.088)
C4': (86.847,6.403,84.624)
C2': (85.135,7.243,83.223)
C2: (80.299,7.333,84.123)
N1: (79.742,7.901,85.204)
N3: (81.555,6.932,83.932)
N6: (79.958,8.692,87.363)
N7: (82.918,7.828,87.122)
N9: (83.634,6.886,85.204)
O5': (86.935,7.595,86.697)
O3': (87.410,8.256,83.174)
Image (generated by PyMOL):
PyMOL image
show in jmol