ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1EXD:B8:B42

Extra

PDB:
ATOM 1 O3' C A 7 21.614 19.475 36.827 1.00 51.78 O
ATOM 2 P G A 8 22.413 18.318 37.564 1.00 64.66 P
ATOM 3 OP1 G A 8 21.613 17.067 37.622 1.00 70.83 O
ATOM 4 OP2 G A 8 22.884 18.949 38.825 1.00 69.60 O
ATOM 5 O5' G A 8 23.688 18.053 36.669 1.00 59.98 O
ATOM 6 C5' G A 8 24.827 17.440 37.249 1.00 52.49 C
ATOM 7 C4' G A 8 25.563 16.682 36.206 1.00 50.44 C
ATOM 8 O4' G A 8 24.696 15.660 35.665 1.00 47.57 O
ATOM 9 C3' G A 8 25.886 17.501 34.985 1.00 51.74 C
ATOM 10 O3' G A 8 27.005 18.323 35.219 1.00 55.59 O
ATOM 11 C2' G A 8 26.149 16.418 33.955 1.00 53.47 C
ATOM 12 O2' G A 8 27.425 15.831 34.103 1.00 55.54 O
ATOM 13 C1' G A 8 25.063 15.406 34.324 1.00 48.14 C
ATOM 14 N9 G A 8 23.871 15.536 33.502 1.00 44.90 N
ATOM 15 C8 G A 8 22.623 15.942 33.898 1.00 44.34 C
ATOM 16 N7 G A 8 21.748 15.917 32.926 1.00 45.32 N
ATOM 17 C5 G A 8 22.465 15.474 31.825 1.00 41.41 C
ATOM 18 C6 G A 8 22.052 15.238 30.496 1.00 40.68 C
ATOM 19 O6 G A 8 20.932 15.342 30.020 1.00 41.21 O
ATOM 20 N1 G A 8 23.109 14.826 29.691 1.00 44.33 N
ATOM 21 C2 G A 8 24.406 14.652 30.121 1.00 44.01 C
ATOM 22 N2 G A 8 25.296 14.286 29.201 1.00 41.77 N
ATOM 23 N3 G A 8 24.801 14.837 31.369 1.00 45.31 N
ATOM 24 C4 G A 8 23.784 15.251 32.162 1.00 47.31 C
ATOM 25 P C A 9 27.188 19.654 34.353 1.00 60.28 P
ATOM 26 OP1 C A 9 28.434 20.307 34.820 1.00 59.92 O
ATOM 27 OP2 C A 9 25.905 20.419 34.329 1.00 50.82 O
ATOM 28 O5' C A 9 27.467 19.084 32.901 1.00 53.61 O
TER

ATOM 1 O3' A B 41 13.394 14.102 38.462 1.00 75.88 O
ATOM 2 P G B 42 12.308 15.211 38.855 1.00 82.07 P
ATOM 3 OP1 G B 42 11.378 14.616 39.840 1.00 87.92 O
ATOM 4 OP2 G B 42 11.766 15.815 37.604 1.00 82.91 O
ATOM 5 O5' G B 42 13.168 16.312 39.602 1.00 84.42 O
ATOM 6 C5' G B 42 13.808 17.348 38.860 1.00 81.83 C
ATOM 7 C4' G B 42 15.254 16.998 38.603 1.00 75.09 C
ATOM 8 O4' G B 42 15.361 15.857 37.713 1.00 74.07 O
ATOM 9 C3' G B 42 15.979 18.109 37.880 1.00 72.02 C
ATOM 10 O3' G B 42 16.428 19.015 38.857 1.00 69.32 O
ATOM 11 C2' G B 42 17.101 17.378 37.171 1.00 68.96 C
ATOM 12 O2' G B 42 18.172 17.116 38.057 1.00 66.63 O
ATOM 13 C1' G B 42 16.390 16.087 36.763 1.00 69.92 C
ATOM 14 N9 G B 42 15.757 16.145 35.449 1.00 67.57 N
ATOM 15 C8 G B 42 14.409 16.197 35.200 1.00 67.28 C
ATOM 16 N7 G B 42 14.121 16.191 33.926 1.00 71.10 N
ATOM 17 C5 G B 42 15.357 16.136 33.294 1.00 71.98 C
ATOM 18 C6 G B 42 15.683 16.083 31.903 1.00 70.71 C
ATOM 19 O6 G B 42 14.916 16.065 30.927 1.00 68.29 O
ATOM 20 N1 G B 42 17.061 16.042 31.704 1.00 70.12 N
ATOM 21 C2 G B 42 18.003 16.056 32.706 1.00 73.18 C
ATOM 22 N2 G B 42 19.279 16.036 32.317 1.00 75.20 N
ATOM 23 N3 G B 42 17.715 16.093 34.001 1.00 74.10 N
ATOM 24 C4 G B 42 16.381 16.128 34.221 1.00 72.83 C
ATOM 25 P G B 43 15.632 20.383 39.058 1.00 69.48 P
ATOM 26 OP1 G B 43 15.782 20.834 40.465 1.00 70.41 O
ATOM 27 OP2 G B 43 14.274 20.217 38.465 1.00 60.13 O
ATOM 28 O5' G B 43 16.419 21.387 38.116 1.00 70.20 O
TER

Atoms:
OP1: (21.613,17.067,37.622)
OP2: (22.884,18.949,38.825)
C3': (25.886,17.501,34.985)
C1': (25.063,15.406,34.324)
C5': (24.827,17.440,37.249)
O6: (20.932,15.342,30.020)
O4': (24.696,15.660,35.665)
C8: (22.623,15.942,33.898)
C2: (24.406,14.652,30.121)
C6: (22.052,15.238,30.496)
C5: (22.465,15.474,31.825)
C4: (23.784,15.251,32.162)
P: (22.413,18.318,37.564)
C4': (25.563,16.682,36.206)
C2': (26.149,16.418,33.955)
O2': (27.425,15.831,34.103)
N1: (23.109,14.826,29.691)
N2: (25.296,14.286,29.201)
N3: (24.801,14.837,31.369)
N7: (21.748,15.917,32.926)
N9: (23.871,15.536,33.502)
O5': (23.688,18.053,36.669)
O3': (27.005,18.323,35.219)
OP1: (11.378,14.616,39.840)
OP2: (11.766,15.815,37.604)
C3': (15.979,18.109,37.880)
C1': (16.390,16.087,36.763)
C5': (13.808,17.348,38.860)
O6: (14.916,16.065,30.927)
O4': (15.361,15.857,37.713)
C8: (14.409,16.197,35.200)
C2: (18.003,16.056,32.706)
C6: (15.683,16.083,31.903)
C5: (15.357,16.136,33.294)
C4: (16.381,16.128,34.221)
P: (12.308,15.211,38.855)
C4': (15.254,16.998,38.603)
C2': (17.101,17.378,37.171)
O2': (18.172,17.116,38.057)
N1: (17.061,16.042,31.704)
N2: (19.279,16.036,32.317)
N3: (17.715,16.093,34.001)
N7: (14.121,16.191,33.926)
N9: (15.757,16.145,35.449)
O5': (13.168,16.312,39.602)
O3': (16.428,19.015,38.857)
Image (generated by PyMOL):
PyMOL image
show in jmol