ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:931:933

Extra

PDB:
ATOM 1 O3' C A 30 81.112 6.798 100.713 1.00 87.78 O
ATOM 2 P G A 31 82.513 7.496 100.346 1.00 90.23 P
ATOM 3 OP1 G A 31 83.579 6.574 100.813 1.00 90.83 O
ATOM 4 OP2 G A 31 82.489 8.893 100.854 1.00 91.84 O
ATOM 5 O5' G A 31 82.515 7.530 98.747 1.00 89.72 O
ATOM 6 C5' G A 31 82.493 6.302 97.991 1.00 90.10 C
ATOM 7 C4' G A 31 82.276 6.563 96.512 1.00 90.91 C
ATOM 8 O4' G A 31 80.971 7.144 96.270 1.00 90.80 O
ATOM 9 C3' G A 31 83.190 7.547 95.808 1.00 90.87 C
ATOM 10 O3' G A 31 84.473 6.991 95.559 1.00 93.38 O
ATOM 11 C2' G A 31 82.430 7.782 94.506 1.00 89.94 C
ATOM 12 O2' G A 31 82.598 6.727 93.580 1.00 88.21 O
ATOM 13 C1' G A 31 80.978 7.775 94.994 1.00 89.75 C
ATOM 14 N9 G A 31 80.391 9.109 95.110 1.00 88.58 N
ATOM 15 C8 G A 31 80.242 9.859 96.253 1.00 88.58 C
ATOM 16 N7 G A 31 79.687 11.021 96.035 1.00 88.38 N
ATOM 17 C5 G A 31 79.451 11.041 94.667 1.00 88.09 C
ATOM 18 C6 G A 31 78.865 12.047 93.844 1.00 87.74 C
ATOM 19 O6 G A 31 78.419 13.156 94.175 1.00 87.56 O
ATOM 20 N1 G A 31 78.827 11.656 92.510 1.00 86.43 N
ATOM 21 C2 G A 31 79.289 10.459 92.026 1.00 85.65 C
ATOM 22 N2 G A 31 79.172 10.277 90.705 1.00 84.60 N
ATOM 23 N3 G A 31 79.829 9.513 92.779 1.00 86.27 N
ATOM 24 C4 G A 31 79.880 9.869 94.080 1.00 87.42 C
ATOM 25 P U A 32 85.635 7.913 94.942 1.00 94.23 P
ATOM 26 OP1 U A 32 86.940 7.347 95.359 1.00 94.98 O
ATOM 27 OP2 U A 32 85.330 9.339 95.237 1.00 94.81 O
ATOM 28 O5' U A 32 85.489 7.681 93.377 1.00 95.02 O
TER

ATOM 1 O3' U B 32 86.307 8.939 88.850 1.00 97.18 O
ATOM 2 P A B 33 87.549 8.247 88.112 1.00 96.12 P
ATOM 3 OP1 A B 33 88.082 7.212 89.035 1.00 97.21 O
ATOM 4 OP2 A B 33 88.447 9.312 87.604 1.00 96.54 O
ATOM 5 O5' A B 33 86.881 7.507 86.877 1.00 93.75 O
ATOM 6 C5' A B 33 87.667 6.748 85.956 1.00 91.71 C
ATOM 7 C4' A B 33 86.915 6.601 84.665 1.00 90.99 C
ATOM 8 O4' A B 33 85.685 5.869 84.913 1.00 90.77 O
ATOM 9 C3' A B 33 86.452 7.921 84.083 1.00 90.53 C
ATOM 10 O3' A B 33 87.488 8.559 83.345 1.00 92.47 O
ATOM 11 C2' A B 33 85.238 7.504 83.265 1.00 89.98 C
ATOM 12 O2' A B 33 85.584 6.885 82.039 1.00 88.95 O
ATOM 13 C1' A B 33 84.611 6.467 84.200 1.00 89.10 C
ATOM 14 N9 A B 33 83.694 7.052 85.186 1.00 86.82 N
ATOM 15 C8 A B 33 84.009 7.473 86.459 1.00 86.24 C
ATOM 16 N7 A B 33 82.990 7.957 87.127 1.00 85.66 N
ATOM 17 C5 A B 33 81.929 7.852 86.238 1.00 84.29 C
ATOM 18 C6 A B 33 80.564 8.198 86.348 1.00 83.03 C
ATOM 19 N6 A B 33 80.021 8.748 87.440 1.00 80.88 N
ATOM 20 N1 A B 33 79.770 7.956 85.283 1.00 81.70 N
ATOM 21 C2 A B 33 80.318 7.406 84.187 1.00 82.56 C
ATOM 22 N3 A B 33 81.582 7.041 83.962 1.00 82.74 N
ATOM 23 C4 A B 33 82.346 7.294 85.038 1.00 84.46 C
ATOM 24 P C B 34 87.266 10.051 82.791 1.00 92.25 P
ATOM 25 OP1 C B 34 88.548 10.532 82.206 1.00 92.18 O
ATOM 26 OP2 C B 34 86.595 10.860 83.850 1.00 91.37 O
ATOM 27 O5' C B 34 86.245 9.812 81.597 1.00 88.49 O
TER

Atoms:
OP1: (83.579,6.574,100.813)
OP2: (82.489,8.893,100.854)
C3': (83.190,7.547,95.808)
C1': (80.978,7.775,94.994)
C5': (82.493,6.302,97.991)
O6: (78.419,13.156,94.175)
O4': (80.971,7.144,96.270)
C8: (80.242,9.859,96.253)
C2: (79.289,10.459,92.026)
C6: (78.865,12.047,93.844)
C5: (79.451,11.041,94.667)
C4: (79.880,9.869,94.080)
P: (82.513,7.496,100.346)
C4': (82.276,6.563,96.512)
C2': (82.430,7.782,94.506)
O2': (82.598,6.727,93.580)
N1: (78.827,11.656,92.510)
N2: (79.172,10.277,90.705)
N3: (79.829,9.513,92.779)
N7: (79.687,11.021,96.035)
N9: (80.391,9.109,95.110)
O5': (82.515,7.530,98.747)
O3': (84.473,6.991,95.559)
OP1: (88.082,7.212,89.035)
OP2: (88.447,9.312,87.604)
C3': (86.452,7.921,84.083)
C1': (84.611,6.467,84.200)
C5': (87.667,6.748,85.956)
O4': (85.685,5.869,84.913)
C8: (84.009,7.473,86.459)
O2': (85.584,6.885,82.039)
C6: (80.564,8.198,86.348)
C5: (81.929,7.852,86.238)
C4: (82.346,7.294,85.038)
P: (87.549,8.247,88.112)
C4': (86.915,6.601,84.665)
C2': (85.238,7.504,83.265)
C2: (80.318,7.406,84.187)
N1: (79.770,7.956,85.283)
N3: (81.582,7.041,83.962)
N6: (80.021,8.748,87.440)
N7: (82.990,7.957,87.127)
N9: (83.694,7.052,85.186)
O5': (86.881,7.507,86.877)
O3': (87.488,8.559,83.345)
Image (generated by PyMOL):
PyMOL image
show in jmol