ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:931:933

Extra

PDB:
ATOM 1 O3' C A 30 81.062 5.603 100.267 1.00 76.82 O
ATOM 2 P G A 31 82.456 6.306 99.893 1.00 78.56 P
ATOM 3 OP1 G A 31 83.521 5.345 100.297 1.00 78.72 O
ATOM 4 OP2 G A 31 82.458 7.687 100.456 1.00 75.69 O
ATOM 5 O5' G A 31 82.425 6.378 98.301 1.00 76.30 O
ATOM 6 C5' G A 31 82.352 5.168 97.528 1.00 75.94 C
ATOM 7 C4' G A 31 82.163 5.475 96.062 1.00 74.99 C
ATOM 8 O4' G A 31 80.897 6.140 95.843 1.00 74.56 O
ATOM 9 C3' G A 31 83.134 6.453 95.432 1.00 74.68 C
ATOM 10 O3' G A 31 84.390 5.828 95.186 1.00 77.33 O
ATOM 11 C2' G A 31 82.408 6.800 94.135 1.00 73.54 C
ATOM 12 O2' G A 31 82.548 5.794 93.156 1.00 72.61 O
ATOM 13 C1' G A 31 80.949 6.816 94.597 1.00 72.87 C
ATOM 14 N9 G A 31 80.380 8.155 94.747 1.00 70.87 N
ATOM 15 C8 G A 31 80.168 8.850 95.914 1.00 70.22 C
ATOM 16 N7 G A 31 79.632 10.025 95.721 1.00 69.39 N
ATOM 17 C5 G A 31 79.481 10.114 94.343 1.00 68.03 C
ATOM 18 C6 G A 31 78.952 11.161 93.542 1.00 66.98 C
ATOM 19 O6 G A 31 78.489 12.250 93.905 1.00 64.20 O
ATOM 20 N1 G A 31 78.999 10.841 92.187 1.00 66.07 N
ATOM 21 C2 G A 31 79.491 9.665 91.670 1.00 67.30 C
ATOM 22 N2 G A 31 79.466 9.541 90.333 1.00 65.92 N
ATOM 23 N3 G A 31 79.977 8.681 92.409 1.00 67.71 N
ATOM 24 C4 G A 31 79.942 8.972 93.726 1.00 68.48 C
ATOM 25 P U A 32 85.615 6.688 94.596 1.00 77.88 P
ATOM 26 OP1 U A 32 86.856 5.896 94.804 1.00 78.34 O
ATOM 27 OP2 U A 32 85.547 8.089 95.108 1.00 77.18 O
ATOM 28 O5' U A 32 85.317 6.710 93.037 1.00 75.63 O
TER

ATOM 1 O3' U B 32 86.240 7.956 88.541 1.00 73.12 O
ATOM 2 P A B 33 87.494 7.231 87.857 1.00 74.57 P
ATOM 3 OP1 A B 33 87.671 5.920 88.539 1.00 74.24 O
ATOM 4 OP2 A B 33 88.614 8.206 87.834 1.00 74.39 O
ATOM 5 O5' A B 33 87.016 6.964 86.364 1.00 72.61 O
ATOM 6 C5' A B 33 87.643 5.957 85.554 1.00 72.28 C
ATOM 7 C4' A B 33 86.746 5.606 84.397 1.00 71.75 C
ATOM 8 O4' A B 33 85.542 4.967 84.896 1.00 71.62 O
ATOM 9 C3' A B 33 86.246 6.815 83.630 1.00 72.15 C
ATOM 10 O3' A B 33 87.207 7.245 82.672 1.00 73.88 O
ATOM 11 C2' A B 33 84.940 6.314 83.028 1.00 70.98 C
ATOM 12 O2' A B 33 85.137 5.540 81.863 1.00 70.93 O
ATOM 13 C1' A B 33 84.415 5.423 84.159 1.00 70.00 C
ATOM 14 N9 A B 33 83.496 6.083 85.095 1.00 67.29 N
ATOM 15 C8 A B 33 83.768 6.521 86.371 1.00 66.91 C
ATOM 16 N7 A B 33 82.736 7.046 86.984 1.00 65.63 N
ATOM 17 C5 A B 33 81.714 6.958 86.049 1.00 66.22 C
ATOM 18 C6 A B 33 80.357 7.344 86.087 1.00 65.99 C
ATOM 19 N6 A B 33 79.775 7.914 87.146 1.00 66.20 N
ATOM 20 N1 A B 33 79.611 7.118 84.985 1.00 65.25 N
ATOM 21 C2 A B 33 80.194 6.542 83.923 1.00 64.93 C
ATOM 22 N3 A B 33 81.454 6.135 83.767 1.00 64.94 N
ATOM 23 C4 A B 33 82.170 6.374 84.878 1.00 65.54 C
ATOM 24 P C B 34 87.083 8.710 82.024 1.00 74.99 P
ATOM 25 OP1 C B 34 88.283 8.932 81.171 1.00 74.31 O
ATOM 26 OP2 C B 34 86.743 9.702 83.087 1.00 72.56 O
ATOM 27 O5' C B 34 85.830 8.551 81.060 1.00 73.15 O
TER

Atoms:
OP1: (83.521,5.345,100.297)
OP2: (82.458,7.687,100.456)
C3': (83.134,6.453,95.432)
C1': (80.949,6.816,94.597)
C5': (82.352,5.168,97.528)
O6: (78.489,12.250,93.905)
O4': (80.897,6.140,95.843)
C8: (80.168,8.850,95.914)
C2: (79.491,9.665,91.670)
C6: (78.952,11.161,93.542)
C5: (79.481,10.114,94.343)
C4: (79.942,8.972,93.726)
P: (82.456,6.306,99.893)
C4': (82.163,5.475,96.062)
C2': (82.408,6.800,94.135)
O2': (82.548,5.794,93.156)
N1: (78.999,10.841,92.187)
N2: (79.466,9.541,90.333)
N3: (79.977,8.681,92.409)
N7: (79.632,10.025,95.721)
N9: (80.380,8.155,94.747)
O5': (82.425,6.378,98.301)
O3': (84.390,5.828,95.186)
OP1: (87.671,5.920,88.539)
OP2: (88.614,8.206,87.834)
C3': (86.246,6.815,83.630)
C1': (84.415,5.423,84.159)
C5': (87.643,5.957,85.554)
O4': (85.542,4.967,84.896)
C8: (83.768,6.521,86.371)
O2': (85.137,5.540,81.863)
C6: (80.357,7.344,86.087)
C5: (81.714,6.958,86.049)
C4: (82.170,6.374,84.878)
P: (87.494,7.231,87.857)
C4': (86.746,5.606,84.397)
C2': (84.940,6.314,83.028)
C2: (80.194,6.542,83.923)
N1: (79.611,7.118,84.985)
N3: (81.454,6.135,83.767)
N6: (79.775,7.914,87.146)
N7: (82.736,7.046,86.984)
N9: (83.496,6.083,85.095)
O5': (87.016,6.964,86.364)
O3': (87.207,7.245,82.672)
Image (generated by PyMOL):
PyMOL image
show in jmol