Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:931:933
Extra
PDB:
ATOM 1 O3' C A 30 81.083 5.490 100.245 1.00 81.20 O
ATOM 2 P G A 31 82.479 6.179 99.846 1.00 82.23 P
ATOM 3 OP1 G A 31 83.537 5.221 100.271 1.00 82.96 O
ATOM 4 OP2 G A 31 82.493 7.574 100.374 1.00 80.56 O
ATOM 5 O5' G A 31 82.444 6.218 98.253 1.00 79.82 O
ATOM 6 C5' G A 31 82.340 4.995 97.502 1.00 79.35 C
ATOM 7 C4' G A 31 82.126 5.283 96.035 1.00 78.33 C
ATOM 8 O4' G A 31 80.867 5.967 95.831 1.00 77.94 O
ATOM 9 C3' G A 31 83.107 6.231 95.375 1.00 78.19 C
ATOM 10 O3' G A 31 84.338 5.565 95.114 1.00 81.73 O
ATOM 11 C2' G A 31 82.361 6.593 94.094 1.00 76.55 C
ATOM 12 O2' G A 31 82.448 5.585 93.111 1.00 75.38 O
ATOM 13 C1' G A 31 80.911 6.645 94.587 1.00 75.93 C
ATOM 14 N9 G A 31 80.374 7.995 94.754 1.00 73.59 N
ATOM 15 C8 G A 31 80.210 8.691 95.927 1.00 72.91 C
ATOM 16 N7 G A 31 79.701 9.881 95.750 1.00 72.00 N
ATOM 17 C5 G A 31 79.517 9.978 94.377 1.00 71.14 C
ATOM 18 C6 G A 31 78.999 11.045 93.589 1.00 70.34 C
ATOM 19 O6 G A 31 78.581 12.153 93.967 1.00 66.80 O
ATOM 20 N1 G A 31 79.001 10.724 92.232 1.00 68.81 N
ATOM 21 C2 G A 31 79.442 9.532 91.703 1.00 69.76 C
ATOM 22 N2 G A 31 79.377 9.405 90.367 1.00 68.19 N
ATOM 23 N3 G A 31 79.918 8.533 92.428 1.00 70.76 N
ATOM 24 C4 G A 31 79.928 8.823 93.746 1.00 71.41 C
ATOM 25 P U A 32 85.596 6.391 94.547 1.00 82.56 P
ATOM 26 OP1 U A 32 86.795 5.518 94.669 1.00 83.56 O
ATOM 27 OP2 U A 32 85.620 7.759 95.142 1.00 82.03 O
ATOM 28 O5' U A 32 85.270 6.524 93.000 1.00 80.84 O
TER
ATOM 1 O3' U B 32 86.265 7.794 88.531 1.00 79.38 O
ATOM 2 P A B 33 87.523 7.083 87.837 1.00 81.08 P
ATOM 3 OP1 A B 33 87.783 5.820 88.580 1.00 80.45 O
ATOM 4 OP2 A B 33 88.602 8.094 87.704 1.00 80.90 O
ATOM 5 O5' A B 33 86.985 6.721 86.385 1.00 79.38 O
ATOM 6 C5' A B 33 87.635 5.734 85.570 1.00 78.43 C
ATOM 7 C4' A B 33 86.751 5.386 84.402 1.00 77.82 C
ATOM 8 O4' A B 33 85.535 4.766 84.894 1.00 76.24 O
ATOM 9 C3' A B 33 86.273 6.597 83.621 1.00 77.91 C
ATOM 10 O3' A B 33 87.248 6.998 82.663 1.00 80.04 O
ATOM 11 C2' A B 33 84.961 6.112 83.018 1.00 76.55 C
ATOM 12 O2' A B 33 85.145 5.318 81.862 1.00 77.09 O
ATOM 13 C1' A B 33 84.419 5.237 84.153 1.00 75.00 C
ATOM 14 N9 A B 33 83.507 5.913 85.084 1.00 71.57 N
ATOM 15 C8 A B 33 83.782 6.352 86.359 1.00 70.97 C
ATOM 16 N7 A B 33 82.751 6.883 86.970 1.00 70.07 N
ATOM 17 C5 A B 33 81.730 6.800 86.033 1.00 70.42 C
ATOM 18 C6 A B 33 80.375 7.190 86.070 1.00 69.62 C
ATOM 19 N6 A B 33 79.794 7.759 87.129 1.00 70.03 N
ATOM 20 N1 A B 33 79.629 6.969 84.968 1.00 68.55 N
ATOM 21 C2 A B 33 80.211 6.392 83.906 1.00 68.44 C
ATOM 22 N3 A B 33 81.469 5.980 83.752 1.00 69.16 N
ATOM 23 C4 A B 33 82.185 6.214 84.864 1.00 69.66 C
ATOM 24 P C B 34 87.179 8.471 82.021 1.00 81.77 P
ATOM 25 OP1 C B 34 88.413 8.661 81.208 1.00 80.76 O
ATOM 26 OP2 C B 34 86.837 9.463 83.081 1.00 79.31 O
ATOM 27 O5' C B 34 85.948 8.359 81.023 1.00 79.30 O
TER
ATOM 2 P G A 31 82.479 6.179 99.846 1.00 82.23 P
ATOM 3 OP1 G A 31 83.537 5.221 100.271 1.00 82.96 O
ATOM 4 OP2 G A 31 82.493 7.574 100.374 1.00 80.56 O
ATOM 5 O5' G A 31 82.444 6.218 98.253 1.00 79.82 O
ATOM 6 C5' G A 31 82.340 4.995 97.502 1.00 79.35 C
ATOM 7 C4' G A 31 82.126 5.283 96.035 1.00 78.33 C
ATOM 8 O4' G A 31 80.867 5.967 95.831 1.00 77.94 O
ATOM 9 C3' G A 31 83.107 6.231 95.375 1.00 78.19 C
ATOM 10 O3' G A 31 84.338 5.565 95.114 1.00 81.73 O
ATOM 11 C2' G A 31 82.361 6.593 94.094 1.00 76.55 C
ATOM 12 O2' G A 31 82.448 5.585 93.111 1.00 75.38 O
ATOM 13 C1' G A 31 80.911 6.645 94.587 1.00 75.93 C
ATOM 14 N9 G A 31 80.374 7.995 94.754 1.00 73.59 N
ATOM 15 C8 G A 31 80.210 8.691 95.927 1.00 72.91 C
ATOM 16 N7 G A 31 79.701 9.881 95.750 1.00 72.00 N
ATOM 17 C5 G A 31 79.517 9.978 94.377 1.00 71.14 C
ATOM 18 C6 G A 31 78.999 11.045 93.589 1.00 70.34 C
ATOM 19 O6 G A 31 78.581 12.153 93.967 1.00 66.80 O
ATOM 20 N1 G A 31 79.001 10.724 92.232 1.00 68.81 N
ATOM 21 C2 G A 31 79.442 9.532 91.703 1.00 69.76 C
ATOM 22 N2 G A 31 79.377 9.405 90.367 1.00 68.19 N
ATOM 23 N3 G A 31 79.918 8.533 92.428 1.00 70.76 N
ATOM 24 C4 G A 31 79.928 8.823 93.746 1.00 71.41 C
ATOM 25 P U A 32 85.596 6.391 94.547 1.00 82.56 P
ATOM 26 OP1 U A 32 86.795 5.518 94.669 1.00 83.56 O
ATOM 27 OP2 U A 32 85.620 7.759 95.142 1.00 82.03 O
ATOM 28 O5' U A 32 85.270 6.524 93.000 1.00 80.84 O
TER
ATOM 1 O3' U B 32 86.265 7.794 88.531 1.00 79.38 O
ATOM 2 P A B 33 87.523 7.083 87.837 1.00 81.08 P
ATOM 3 OP1 A B 33 87.783 5.820 88.580 1.00 80.45 O
ATOM 4 OP2 A B 33 88.602 8.094 87.704 1.00 80.90 O
ATOM 5 O5' A B 33 86.985 6.721 86.385 1.00 79.38 O
ATOM 6 C5' A B 33 87.635 5.734 85.570 1.00 78.43 C
ATOM 7 C4' A B 33 86.751 5.386 84.402 1.00 77.82 C
ATOM 8 O4' A B 33 85.535 4.766 84.894 1.00 76.24 O
ATOM 9 C3' A B 33 86.273 6.597 83.621 1.00 77.91 C
ATOM 10 O3' A B 33 87.248 6.998 82.663 1.00 80.04 O
ATOM 11 C2' A B 33 84.961 6.112 83.018 1.00 76.55 C
ATOM 12 O2' A B 33 85.145 5.318 81.862 1.00 77.09 O
ATOM 13 C1' A B 33 84.419 5.237 84.153 1.00 75.00 C
ATOM 14 N9 A B 33 83.507 5.913 85.084 1.00 71.57 N
ATOM 15 C8 A B 33 83.782 6.352 86.359 1.00 70.97 C
ATOM 16 N7 A B 33 82.751 6.883 86.970 1.00 70.07 N
ATOM 17 C5 A B 33 81.730 6.800 86.033 1.00 70.42 C
ATOM 18 C6 A B 33 80.375 7.190 86.070 1.00 69.62 C
ATOM 19 N6 A B 33 79.794 7.759 87.129 1.00 70.03 N
ATOM 20 N1 A B 33 79.629 6.969 84.968 1.00 68.55 N
ATOM 21 C2 A B 33 80.211 6.392 83.906 1.00 68.44 C
ATOM 22 N3 A B 33 81.469 5.980 83.752 1.00 69.16 N
ATOM 23 C4 A B 33 82.185 6.214 84.864 1.00 69.66 C
ATOM 24 P C B 34 87.179 8.471 82.021 1.00 81.77 P
ATOM 25 OP1 C B 34 88.413 8.661 81.208 1.00 80.76 O
ATOM 26 OP2 C B 34 86.837 9.463 83.081 1.00 79.31 O
ATOM 27 O5' C B 34 85.948 8.359 81.023 1.00 79.30 O
TER
Atoms:
OP1: (83.537,5.221,100.271)
OP2: (82.493,7.574,100.374)
C3': (83.107,6.231,95.375)
C1': (80.911,6.645,94.587)
C5': (82.340,4.995,97.502)
O6: (78.581,12.153,93.967)
O4': (80.867,5.967,95.831)
C8: (80.210,8.691,95.927)
C2: (79.442,9.532,91.703)
C6: (78.999,11.045,93.589)
C5: (79.517,9.978,94.377)
C4: (79.928,8.823,93.746)
P: (82.479,6.179,99.846)
C4': (82.126,5.283,96.035)
C2': (82.361,6.593,94.094)
O2': (82.448,5.585,93.111)
N1: (79.001,10.724,92.232)
N2: (79.377,9.405,90.367)
N3: (79.918,8.533,92.428)
N7: (79.701,9.881,95.750)
N9: (80.374,7.995,94.754)
O5': (82.444,6.218,98.253)
O3': (84.338,5.565,95.114)
OP2: (82.493,7.574,100.374)
C3': (83.107,6.231,95.375)
C1': (80.911,6.645,94.587)
C5': (82.340,4.995,97.502)
O6: (78.581,12.153,93.967)
O4': (80.867,5.967,95.831)
C8: (80.210,8.691,95.927)
C2: (79.442,9.532,91.703)
C6: (78.999,11.045,93.589)
C5: (79.517,9.978,94.377)
C4: (79.928,8.823,93.746)
P: (82.479,6.179,99.846)
C4': (82.126,5.283,96.035)
C2': (82.361,6.593,94.094)
O2': (82.448,5.585,93.111)
N1: (79.001,10.724,92.232)
N2: (79.377,9.405,90.367)
N3: (79.918,8.533,92.428)
N7: (79.701,9.881,95.750)
N9: (80.374,7.995,94.754)
O5': (82.444,6.218,98.253)
O3': (84.338,5.565,95.114)
OP1: (87.783,5.820,88.580)
OP2: (88.602,8.094,87.704)
C3': (86.273,6.597,83.621)
C1': (84.419,5.237,84.153)
C5': (87.635,5.734,85.570)
O4': (85.535,4.766,84.894)
C8: (83.782,6.352,86.359)
O2': (85.145,5.318,81.862)
C6: (80.375,7.190,86.070)
C5: (81.730,6.800,86.033)
C4: (82.185,6.214,84.864)
P: (87.523,7.083,87.837)
C4': (86.751,5.386,84.402)
C2': (84.961,6.112,83.018)
C2: (80.211,6.392,83.906)
N1: (79.629,6.969,84.968)
N3: (81.469,5.980,83.752)
N6: (79.794,7.759,87.129)
N7: (82.751,6.883,86.970)
N9: (83.507,5.913,85.084)
O5': (86.985,6.721,86.385)
O3': (87.248,6.998,82.663)
OP2: (88.602,8.094,87.704)
C3': (86.273,6.597,83.621)
C1': (84.419,5.237,84.153)
C5': (87.635,5.734,85.570)
O4': (85.535,4.766,84.894)
C8: (83.782,6.352,86.359)
O2': (85.145,5.318,81.862)
C6: (80.375,7.190,86.070)
C5: (81.730,6.800,86.033)
C4: (82.185,6.214,84.864)
P: (87.523,7.083,87.837)
C4': (86.751,5.386,84.402)
C2': (84.961,6.112,83.018)
C2: (80.211,6.392,83.906)
N1: (79.629,6.969,84.968)
N3: (81.469,5.980,83.752)
N6: (79.794,7.759,87.129)
N7: (82.751,6.883,86.970)
N9: (83.507,5.913,85.084)
O5': (86.985,6.721,86.385)
O3': (87.248,6.998,82.663)
Image (generated by PyMOL):