Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2039:A2038
Extra
PDB:
ATOM 1 O3' G A2038 56.584 137.709 109.162 1.00 32.94 O
ATOM 2 P G A2039 57.471 136.570 109.867 1.00 33.01 P
ATOM 3 OP1 G A2039 58.121 137.109 111.082 1.00 34.93 O
ATOM 4 OP2 G A2039 58.277 135.879 108.845 1.00 32.44 O
ATOM 5 O5' G A2039 56.370 135.560 110.375 1.00 31.26 O
ATOM 6 C5' G A2039 56.641 134.654 111.413 1.00 32.85 C
ATOM 7 C4' G A2039 55.431 133.795 111.660 1.00 32.78 C
ATOM 8 O4' G A2039 54.280 134.594 112.083 1.00 33.76 O
ATOM 9 C3' G A2039 54.905 133.039 110.462 1.00 30.89 C
ATOM 10 O3' G A2039 55.658 131.907 110.112 1.00 27.24 O
ATOM 11 C2' G A2039 53.495 132.691 110.903 1.00 32.25 C
ATOM 12 O2' G A2039 53.504 131.585 111.775 1.00 34.24 O
ATOM 13 C1' G A2039 53.077 133.968 111.641 1.00 32.62 C
ATOM 14 N9 G A2039 52.381 134.866 110.714 1.00 32.41 N
ATOM 15 C8 G A2039 52.897 135.988 110.108 1.00 31.93 C
ATOM 16 N7 G A2039 52.071 136.545 109.266 1.00 32.84 N
ATOM 17 C5 G A2039 50.927 135.757 109.327 1.00 33.00 C
ATOM 18 C6 G A2039 49.711 135.859 108.612 1.00 34.00 C
ATOM 19 O6 G A2039 49.398 136.690 107.754 1.00 34.30 O
ATOM 20 N1 G A2039 48.819 134.848 108.968 1.00 33.74 N
ATOM 21 C2 G A2039 49.072 133.854 109.886 1.00 33.79 C
ATOM 22 N2 G A2039 48.087 132.962 110.095 1.00 32.43 N
ATOM 23 N3 G A2039 50.211 133.744 110.551 1.00 32.92 N
ATOM 24 C4 G A2039 51.089 134.724 110.226 1.00 31.98 C
ATOM 25 P G A2040 55.697 131.484 108.588 1.00 25.92 P
ATOM 26 OP1 G A2040 56.728 130.464 108.395 1.00 25.92 O
ATOM 27 OP2 G A2040 55.795 132.751 107.857 1.00 25.70 O
ATOM 28 O5' G A2040 54.224 130.944 108.297 1.00 26.89 O
TER
ATOM 1 O3' G B2037 58.591 144.450 109.663 1.00 31.63 O
ATOM 2 P G B2038 59.067 143.295 108.664 1.00 31.55 P
ATOM 3 OP1 G B2038 60.528 143.167 108.774 1.00 30.81 O
ATOM 4 OP2 G B2038 58.457 143.510 107.353 1.00 30.70 O
ATOM 5 O5' G B2038 58.408 141.992 109.277 1.00 30.12 O
ATOM 6 C5' G B2038 58.414 140.764 108.536 1.00 34.10 C
ATOM 7 C4' G B2038 57.236 139.926 108.928 1.00 35.51 C
ATOM 8 O4' G B2038 56.028 140.654 108.603 1.00 37.67 O
ATOM 9 C3' G B2038 57.167 138.598 108.206 1.00 35.17 C
ATOM 10 O3' G B2038 56.584 137.709 109.162 1.00 32.94 O
ATOM 11 C2' G B2038 56.221 138.909 107.043 1.00 37.33 C
ATOM 12 O2' G B2038 55.517 137.800 106.525 1.00 38.56 O
ATOM 13 C1' G B2038 55.257 139.899 107.697 1.00 38.60 C
ATOM 14 N9 G B2038 54.573 140.787 106.752 1.00 40.52 N
ATOM 15 C8 G B2038 55.111 141.803 105.992 1.00 39.72 C
ATOM 16 N7 G B2038 54.250 142.334 105.169 1.00 40.33 N
ATOM 17 C5 G B2038 53.066 141.637 105.412 1.00 40.88 C
ATOM 18 C6 G B2038 51.780 141.733 104.798 1.00 39.83 C
ATOM 19 O6 G B2038 51.431 142.435 103.846 1.00 39.59 O
ATOM 20 N1 G B2038 50.865 140.866 105.386 1.00 38.48 N
ATOM 21 C2 G B2038 51.146 139.992 106.402 1.00 38.91 C
ATOM 22 N2 G B2038 50.120 139.253 106.857 1.00 39.51 N
ATOM 23 N3 G B2038 52.336 139.856 106.942 1.00 39.46 N
ATOM 24 C4 G B2038 53.241 140.708 106.409 1.00 40.55 C
ATOM 25 P G B2039 57.471 136.570 109.867 1.00 33.01 P
ATOM 26 OP1 G B2039 58.121 137.109 111.082 1.00 34.93 O
ATOM 27 OP2 G B2039 58.277 135.879 108.845 1.00 32.44 O
ATOM 28 O5' G B2039 56.370 135.560 110.375 1.00 31.26 O
TER
ATOM 2 P G A2039 57.471 136.570 109.867 1.00 33.01 P
ATOM 3 OP1 G A2039 58.121 137.109 111.082 1.00 34.93 O
ATOM 4 OP2 G A2039 58.277 135.879 108.845 1.00 32.44 O
ATOM 5 O5' G A2039 56.370 135.560 110.375 1.00 31.26 O
ATOM 6 C5' G A2039 56.641 134.654 111.413 1.00 32.85 C
ATOM 7 C4' G A2039 55.431 133.795 111.660 1.00 32.78 C
ATOM 8 O4' G A2039 54.280 134.594 112.083 1.00 33.76 O
ATOM 9 C3' G A2039 54.905 133.039 110.462 1.00 30.89 C
ATOM 10 O3' G A2039 55.658 131.907 110.112 1.00 27.24 O
ATOM 11 C2' G A2039 53.495 132.691 110.903 1.00 32.25 C
ATOM 12 O2' G A2039 53.504 131.585 111.775 1.00 34.24 O
ATOM 13 C1' G A2039 53.077 133.968 111.641 1.00 32.62 C
ATOM 14 N9 G A2039 52.381 134.866 110.714 1.00 32.41 N
ATOM 15 C8 G A2039 52.897 135.988 110.108 1.00 31.93 C
ATOM 16 N7 G A2039 52.071 136.545 109.266 1.00 32.84 N
ATOM 17 C5 G A2039 50.927 135.757 109.327 1.00 33.00 C
ATOM 18 C6 G A2039 49.711 135.859 108.612 1.00 34.00 C
ATOM 19 O6 G A2039 49.398 136.690 107.754 1.00 34.30 O
ATOM 20 N1 G A2039 48.819 134.848 108.968 1.00 33.74 N
ATOM 21 C2 G A2039 49.072 133.854 109.886 1.00 33.79 C
ATOM 22 N2 G A2039 48.087 132.962 110.095 1.00 32.43 N
ATOM 23 N3 G A2039 50.211 133.744 110.551 1.00 32.92 N
ATOM 24 C4 G A2039 51.089 134.724 110.226 1.00 31.98 C
ATOM 25 P G A2040 55.697 131.484 108.588 1.00 25.92 P
ATOM 26 OP1 G A2040 56.728 130.464 108.395 1.00 25.92 O
ATOM 27 OP2 G A2040 55.795 132.751 107.857 1.00 25.70 O
ATOM 28 O5' G A2040 54.224 130.944 108.297 1.00 26.89 O
TER
ATOM 1 O3' G B2037 58.591 144.450 109.663 1.00 31.63 O
ATOM 2 P G B2038 59.067 143.295 108.664 1.00 31.55 P
ATOM 3 OP1 G B2038 60.528 143.167 108.774 1.00 30.81 O
ATOM 4 OP2 G B2038 58.457 143.510 107.353 1.00 30.70 O
ATOM 5 O5' G B2038 58.408 141.992 109.277 1.00 30.12 O
ATOM 6 C5' G B2038 58.414 140.764 108.536 1.00 34.10 C
ATOM 7 C4' G B2038 57.236 139.926 108.928 1.00 35.51 C
ATOM 8 O4' G B2038 56.028 140.654 108.603 1.00 37.67 O
ATOM 9 C3' G B2038 57.167 138.598 108.206 1.00 35.17 C
ATOM 10 O3' G B2038 56.584 137.709 109.162 1.00 32.94 O
ATOM 11 C2' G B2038 56.221 138.909 107.043 1.00 37.33 C
ATOM 12 O2' G B2038 55.517 137.800 106.525 1.00 38.56 O
ATOM 13 C1' G B2038 55.257 139.899 107.697 1.00 38.60 C
ATOM 14 N9 G B2038 54.573 140.787 106.752 1.00 40.52 N
ATOM 15 C8 G B2038 55.111 141.803 105.992 1.00 39.72 C
ATOM 16 N7 G B2038 54.250 142.334 105.169 1.00 40.33 N
ATOM 17 C5 G B2038 53.066 141.637 105.412 1.00 40.88 C
ATOM 18 C6 G B2038 51.780 141.733 104.798 1.00 39.83 C
ATOM 19 O6 G B2038 51.431 142.435 103.846 1.00 39.59 O
ATOM 20 N1 G B2038 50.865 140.866 105.386 1.00 38.48 N
ATOM 21 C2 G B2038 51.146 139.992 106.402 1.00 38.91 C
ATOM 22 N2 G B2038 50.120 139.253 106.857 1.00 39.51 N
ATOM 23 N3 G B2038 52.336 139.856 106.942 1.00 39.46 N
ATOM 24 C4 G B2038 53.241 140.708 106.409 1.00 40.55 C
ATOM 25 P G B2039 57.471 136.570 109.867 1.00 33.01 P
ATOM 26 OP1 G B2039 58.121 137.109 111.082 1.00 34.93 O
ATOM 27 OP2 G B2039 58.277 135.879 108.845 1.00 32.44 O
ATOM 28 O5' G B2039 56.370 135.560 110.375 1.00 31.26 O
TER
Atoms:
OP1: (58.121,137.109,111.082)
OP2: (58.277,135.879,108.845)
C3': (54.905,133.039,110.462)
C1': (53.077,133.968,111.641)
C5': (56.641,134.654,111.413)
O6: (49.398,136.690,107.754)
O4': (54.280,134.594,112.083)
C8: (52.897,135.988,110.108)
C2: (49.072,133.854,109.886)
C6: (49.711,135.859,108.612)
C5: (50.927,135.757,109.327)
C4: (51.089,134.724,110.226)
P: (57.471,136.570,109.867)
C4': (55.431,133.795,111.660)
C2': (53.495,132.691,110.903)
O2': (53.504,131.585,111.775)
N1: (48.819,134.848,108.968)
N2: (48.087,132.962,110.095)
N3: (50.211,133.744,110.551)
N7: (52.071,136.545,109.266)
N9: (52.381,134.866,110.714)
O5': (56.370,135.560,110.375)
O3': (55.658,131.907,110.112)
OP2: (58.277,135.879,108.845)
C3': (54.905,133.039,110.462)
C1': (53.077,133.968,111.641)
C5': (56.641,134.654,111.413)
O6: (49.398,136.690,107.754)
O4': (54.280,134.594,112.083)
C8: (52.897,135.988,110.108)
C2: (49.072,133.854,109.886)
C6: (49.711,135.859,108.612)
C5: (50.927,135.757,109.327)
C4: (51.089,134.724,110.226)
P: (57.471,136.570,109.867)
C4': (55.431,133.795,111.660)
C2': (53.495,132.691,110.903)
O2': (53.504,131.585,111.775)
N1: (48.819,134.848,108.968)
N2: (48.087,132.962,110.095)
N3: (50.211,133.744,110.551)
N7: (52.071,136.545,109.266)
N9: (52.381,134.866,110.714)
O5': (56.370,135.560,110.375)
O3': (55.658,131.907,110.112)
OP1: (60.528,143.167,108.774)
OP2: (58.457,143.510,107.353)
C3': (57.167,138.598,108.206)
C1': (55.257,139.899,107.697)
C5': (58.414,140.764,108.536)
O6: (51.431,142.435,103.846)
O4': (56.028,140.654,108.603)
C8: (55.111,141.803,105.992)
C2: (51.146,139.992,106.402)
C6: (51.780,141.733,104.798)
C5: (53.066,141.637,105.412)
C4: (53.241,140.708,106.409)
P: (59.067,143.295,108.664)
C4': (57.236,139.926,108.928)
C2': (56.221,138.909,107.043)
O2': (55.517,137.800,106.525)
N1: (50.865,140.866,105.386)
N2: (50.120,139.253,106.857)
N3: (52.336,139.856,106.942)
N7: (54.250,142.334,105.169)
N9: (54.573,140.787,106.752)
O5': (58.408,141.992,109.277)
O3': (56.584,137.709,109.162)
OP2: (58.457,143.510,107.353)
C3': (57.167,138.598,108.206)
C1': (55.257,139.899,107.697)
C5': (58.414,140.764,108.536)
O6: (51.431,142.435,103.846)
O4': (56.028,140.654,108.603)
C8: (55.111,141.803,105.992)
C2: (51.146,139.992,106.402)
C6: (51.780,141.733,104.798)
C5: (53.066,141.637,105.412)
C4: (53.241,140.708,106.409)
P: (59.067,143.295,108.664)
C4': (57.236,139.926,108.928)
C2': (56.221,138.909,107.043)
O2': (55.517,137.800,106.525)
N1: (50.865,140.866,105.386)
N2: (50.120,139.253,106.857)
N3: (52.336,139.856,106.942)
N7: (54.250,142.334,105.169)
N9: (54.573,140.787,106.752)
O5': (58.408,141.992,109.277)
O3': (56.584,137.709,109.162)
Image (generated by PyMOL):