ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:931:933

Extra

PDB:
ATOM 1 O3' C A 30 81.375 6.685 100.914 1.00 80.34 O
ATOM 2 P G A 31 82.804 7.365 100.633 1.00 82.43 P
ATOM 3 OP1 G A 31 83.831 6.388 101.082 1.00 82.46 O
ATOM 4 OP2 G A 31 82.796 8.729 101.219 1.00 83.34 O
ATOM 5 O5' G A 31 82.855 7.482 99.039 1.00 81.03 O
ATOM 6 C5' G A 31 82.807 6.294 98.226 1.00 81.12 C
ATOM 7 C4' G A 31 82.574 6.625 96.765 1.00 81.91 C
ATOM 8 O4' G A 31 81.301 7.288 96.576 1.00 82.11 O
ATOM 9 C3' G A 31 83.509 7.599 96.074 1.00 82.05 C
ATOM 10 O3' G A 31 84.773 7.008 95.798 1.00 84.73 O
ATOM 11 C2' G A 31 82.740 7.885 94.784 1.00 81.00 C
ATOM 12 O2' G A 31 82.872 6.862 93.817 1.00 78.51 O
ATOM 13 C1' G A 31 81.291 7.880 95.284 1.00 80.85 C
ATOM 14 N9 G A 31 80.695 9.214 95.356 1.00 80.13 N
ATOM 15 C8 G A 31 80.510 9.997 96.473 1.00 79.91 C
ATOM 16 N7 G A 31 79.963 11.151 96.204 1.00 79.22 N
ATOM 17 C5 G A 31 79.770 11.129 94.829 1.00 78.59 C
ATOM 18 C6 G A 31 79.218 12.106 93.961 1.00 78.06 C
ATOM 19 O6 G A 31 78.771 13.223 94.244 1.00 77.99 O
ATOM 20 N1 G A 31 79.218 11.675 92.640 1.00 77.36 N
ATOM 21 C2 G A 31 79.689 10.463 92.205 1.00 77.07 C
ATOM 22 N2 G A 31 79.609 10.236 90.886 1.00 75.66 N
ATOM 23 N3 G A 31 80.201 9.542 93.002 1.00 77.58 N
ATOM 24 C4 G A 31 80.213 9.940 94.291 1.00 78.47 C
ATOM 25 P U A 32 85.938 7.889 95.130 1.00 85.81 P
ATOM 26 OP1 U A 32 87.238 7.252 95.457 1.00 86.71 O
ATOM 27 OP2 U A 32 85.724 9.322 95.469 1.00 86.59 O
ATOM 28 O5' U A 32 85.693 7.700 93.571 1.00 85.30 O
TER

ATOM 1 O3' U B 32 86.611 8.898 89.030 1.00 86.23 O
ATOM 2 P A B 33 87.855 8.250 88.261 1.00 85.71 P
ATOM 3 OP1 A B 33 88.388 7.168 89.128 1.00 86.28 O
ATOM 4 OP2 A B 33 88.749 9.348 87.816 1.00 85.61 O
ATOM 5 O5' A B 33 87.192 7.574 86.986 1.00 83.95 O
ATOM 6 C5' A B 33 87.969 6.790 86.077 1.00 82.68 C
ATOM 7 C4' A B 33 87.230 6.656 84.775 1.00 82.23 C
ATOM 8 O4' A B 33 86.000 5.912 84.997 1.00 82.35 O
ATOM 9 C3' A B 33 86.773 7.982 84.198 1.00 81.53 C
ATOM 10 O3' A B 33 87.818 8.629 83.473 1.00 82.93 O
ATOM 11 C2' A B 33 85.562 7.571 83.373 1.00 81.06 C
ATOM 12 O2' A B 33 85.913 6.961 82.144 1.00 79.60 O
ATOM 13 C1' A B 33 84.929 6.530 84.299 1.00 80.43 C
ATOM 14 N9 A B 33 84.022 7.109 85.299 1.00 78.89 N
ATOM 15 C8 A B 33 84.346 7.534 86.570 1.00 77.89 C
ATOM 16 N7 A B 33 83.329 8.011 87.245 1.00 77.43 N
ATOM 17 C5 A B 33 82.261 7.895 86.366 1.00 76.73 C
ATOM 18 C6 A B 33 80.895 8.227 86.486 1.00 75.88 C
ATOM 19 N6 A B 33 80.355 8.769 87.582 1.00 74.45 N
ATOM 20 N1 A B 33 80.095 7.979 85.426 1.00 75.16 N
ATOM 21 C2 A B 33 80.638 7.436 84.326 1.00 75.80 C
ATOM 22 N3 A B 33 81.903 7.082 84.092 1.00 75.70 N
ATOM 23 C4 A B 33 82.673 7.341 85.163 1.00 76.95 C
ATOM 24 P C B 34 87.597 10.124 82.924 1.00 81.88 P
ATOM 25 OP1 C B 34 88.872 10.594 82.318 1.00 81.38 O
ATOM 26 OP2 C B 34 86.954 10.935 83.998 1.00 80.83 O
ATOM 27 O5' C B 34 86.553 9.896 81.746 1.00 78.37 O
TER

Atoms:
OP1: (83.831,6.388,101.082)
OP2: (82.796,8.729,101.219)
C3': (83.509,7.599,96.074)
C1': (81.291,7.880,95.284)
C5': (82.807,6.294,98.226)
O6: (78.771,13.223,94.244)
O4': (81.301,7.288,96.576)
C8: (80.510,9.997,96.473)
C2: (79.689,10.463,92.205)
C6: (79.218,12.106,93.961)
C5: (79.770,11.129,94.829)
C4: (80.213,9.940,94.291)
P: (82.804,7.365,100.633)
C4': (82.574,6.625,96.765)
C2': (82.740,7.885,94.784)
O2': (82.872,6.862,93.817)
N1: (79.218,11.675,92.640)
N2: (79.609,10.236,90.886)
N3: (80.201,9.542,93.002)
N7: (79.963,11.151,96.204)
N9: (80.695,9.214,95.356)
O5': (82.855,7.482,99.039)
O3': (84.773,7.008,95.798)
OP1: (88.388,7.168,89.128)
OP2: (88.749,9.348,87.816)
C3': (86.773,7.982,84.198)
C1': (84.929,6.530,84.299)
C5': (87.969,6.790,86.077)
O4': (86.000,5.912,84.997)
C8: (84.346,7.534,86.570)
O2': (85.913,6.961,82.144)
C6: (80.895,8.227,86.486)
C5: (82.261,7.895,86.366)
C4: (82.673,7.341,85.163)
P: (87.855,8.250,88.261)
C4': (87.230,6.656,84.775)
C2': (85.562,7.571,83.373)
C2: (80.638,7.436,84.326)
N1: (80.095,7.979,85.426)
N3: (81.903,7.082,84.092)
N6: (80.355,8.769,87.582)
N7: (83.329,8.011,87.245)
N9: (84.022,7.109,85.299)
O5': (87.192,7.574,86.986)
O3': (87.818,8.629,83.473)
Image (generated by PyMOL):
PyMOL image
show in jmol