Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01384:01386
Extra
PDB:
ATOM 1 O3' A A1383 45.974 180.120 64.684 1.00 56.57 O
ATOM 2 P G A1384 45.419 179.714 66.134 1.00 59.58 P
ATOM 3 OP1 G A1384 44.062 180.298 66.281 1.00 58.52 O
ATOM 4 OP2 G A1384 46.465 180.005 67.161 1.00 57.49 O
ATOM 5 O5' G A1384 45.281 178.134 66.017 1.00 56.99 O
ATOM 6 C5' G A1384 45.231 177.314 67.181 1.00 53.21 C
ATOM 7 C4' G A1384 45.322 175.865 66.790 1.00 51.82 C
ATOM 8 O4' G A1384 46.568 175.610 66.095 1.00 50.68 O
ATOM 9 C3' G A1384 45.328 174.914 67.965 1.00 50.76 C
ATOM 10 O3' G A1384 43.979 174.688 68.348 1.00 52.73 O
ATOM 11 C2' G A1384 46.035 173.689 67.395 1.00 49.78 C
ATOM 12 O2' G A1384 45.187 172.879 66.609 1.00 48.00 O
ATOM 13 C1' G A1384 47.074 174.341 66.473 1.00 48.72 C
ATOM 14 N9 G A1384 48.403 174.548 67.044 1.00 47.16 N
ATOM 15 C8 G A1384 49.010 175.758 67.281 1.00 46.69 C
ATOM 16 N7 G A1384 50.225 175.643 67.736 1.00 45.13 N
ATOM 17 C5 G A1384 50.432 174.275 67.818 1.00 44.99 C
ATOM 18 C6 G A1384 51.570 173.552 68.228 1.00 44.37 C
ATOM 19 O6 G A1384 52.661 173.988 68.600 1.00 44.28 O
ATOM 20 N1 G A1384 51.352 172.182 68.172 1.00 44.19 N
ATOM 21 C2 G A1384 50.189 171.585 67.772 1.00 43.29 C
ATOM 22 N2 G A1384 50.172 170.247 67.813 1.00 41.99 N
ATOM 23 N3 G A1384 49.121 172.250 67.368 1.00 44.28 N
ATOM 24 C4 G A1384 49.312 173.583 67.415 1.00 45.16 C
ATOM 25 P C A1385 43.598 174.532 69.899 1.00 55.09 P
ATOM 26 OP1 C A1385 42.117 174.561 69.993 1.00 55.38 O
ATOM 27 OP2 C A1385 44.398 175.480 70.719 1.00 53.17 O
ATOM 28 O5' C A1385 44.061 173.044 70.198 1.00 53.65 O
TER
ATOM 1 O3' C B1385 43.724 169.025 71.459 1.00 61.11 O
ATOM 2 P A B1386 42.259 168.420 71.683 1.00 62.80 P
ATOM 3 OP1 A B1386 41.435 168.761 70.490 1.00 60.08 O
ATOM 4 OP2 A B1386 41.823 168.858 73.041 1.00 60.68 O
ATOM 5 O5' A B1386 42.544 166.854 71.692 1.00 61.30 O
ATOM 6 C5' A B1386 41.499 165.898 71.504 1.00 61.03 C
ATOM 7 C4' A B1386 41.997 164.759 70.647 1.00 60.93 C
ATOM 8 O4' A B1386 42.178 165.217 69.281 1.00 61.47 O
ATOM 9 C3' A B1386 43.366 164.209 71.001 1.00 60.01 C
ATOM 10 O3' A B1386 43.362 163.351 72.125 1.00 57.40 O
ATOM 11 C2' A B1386 43.758 163.501 69.715 1.00 60.52 C
ATOM 12 O2' A B1386 43.111 162.257 69.547 1.00 61.92 O
ATOM 13 C1' A B1386 43.236 164.490 68.673 1.00 61.40 C
ATOM 14 N9 A B1386 44.275 165.434 68.268 1.00 62.59 N
ATOM 15 C8 A B1386 44.301 166.801 68.423 1.00 64.35 C
ATOM 16 N7 A B1386 45.403 167.362 67.980 1.00 65.23 N
ATOM 17 C5 A B1386 46.151 166.294 67.499 1.00 64.41 C
ATOM 18 C6 A B1386 47.432 166.217 66.913 1.00 64.33 C
ATOM 19 N6 A B1386 48.222 167.277 66.717 1.00 63.92 N
ATOM 20 N1 A B1386 47.879 164.996 66.538 1.00 64.19 N
ATOM 21 C2 A B1386 47.094 163.931 66.749 1.00 63.31 C
ATOM 22 N3 A B1386 45.882 163.873 67.298 1.00 64.24 N
ATOM 23 C4 A B1386 45.462 165.103 67.656 1.00 64.39 C
ATOM 24 P C B1387 44.656 163.302 73.072 1.00 57.42 P
ATOM 25 OP1 C B1387 44.402 162.310 74.146 1.00 57.35 O
ATOM 26 OP2 C B1387 45.024 164.692 73.438 1.00 57.79 O
ATOM 27 O5' C B1387 45.791 162.726 72.116 1.00 53.40 O
TER
ATOM 2 P G A1384 45.419 179.714 66.134 1.00 59.58 P
ATOM 3 OP1 G A1384 44.062 180.298 66.281 1.00 58.52 O
ATOM 4 OP2 G A1384 46.465 180.005 67.161 1.00 57.49 O
ATOM 5 O5' G A1384 45.281 178.134 66.017 1.00 56.99 O
ATOM 6 C5' G A1384 45.231 177.314 67.181 1.00 53.21 C
ATOM 7 C4' G A1384 45.322 175.865 66.790 1.00 51.82 C
ATOM 8 O4' G A1384 46.568 175.610 66.095 1.00 50.68 O
ATOM 9 C3' G A1384 45.328 174.914 67.965 1.00 50.76 C
ATOM 10 O3' G A1384 43.979 174.688 68.348 1.00 52.73 O
ATOM 11 C2' G A1384 46.035 173.689 67.395 1.00 49.78 C
ATOM 12 O2' G A1384 45.187 172.879 66.609 1.00 48.00 O
ATOM 13 C1' G A1384 47.074 174.341 66.473 1.00 48.72 C
ATOM 14 N9 G A1384 48.403 174.548 67.044 1.00 47.16 N
ATOM 15 C8 G A1384 49.010 175.758 67.281 1.00 46.69 C
ATOM 16 N7 G A1384 50.225 175.643 67.736 1.00 45.13 N
ATOM 17 C5 G A1384 50.432 174.275 67.818 1.00 44.99 C
ATOM 18 C6 G A1384 51.570 173.552 68.228 1.00 44.37 C
ATOM 19 O6 G A1384 52.661 173.988 68.600 1.00 44.28 O
ATOM 20 N1 G A1384 51.352 172.182 68.172 1.00 44.19 N
ATOM 21 C2 G A1384 50.189 171.585 67.772 1.00 43.29 C
ATOM 22 N2 G A1384 50.172 170.247 67.813 1.00 41.99 N
ATOM 23 N3 G A1384 49.121 172.250 67.368 1.00 44.28 N
ATOM 24 C4 G A1384 49.312 173.583 67.415 1.00 45.16 C
ATOM 25 P C A1385 43.598 174.532 69.899 1.00 55.09 P
ATOM 26 OP1 C A1385 42.117 174.561 69.993 1.00 55.38 O
ATOM 27 OP2 C A1385 44.398 175.480 70.719 1.00 53.17 O
ATOM 28 O5' C A1385 44.061 173.044 70.198 1.00 53.65 O
TER
ATOM 1 O3' C B1385 43.724 169.025 71.459 1.00 61.11 O
ATOM 2 P A B1386 42.259 168.420 71.683 1.00 62.80 P
ATOM 3 OP1 A B1386 41.435 168.761 70.490 1.00 60.08 O
ATOM 4 OP2 A B1386 41.823 168.858 73.041 1.00 60.68 O
ATOM 5 O5' A B1386 42.544 166.854 71.692 1.00 61.30 O
ATOM 6 C5' A B1386 41.499 165.898 71.504 1.00 61.03 C
ATOM 7 C4' A B1386 41.997 164.759 70.647 1.00 60.93 C
ATOM 8 O4' A B1386 42.178 165.217 69.281 1.00 61.47 O
ATOM 9 C3' A B1386 43.366 164.209 71.001 1.00 60.01 C
ATOM 10 O3' A B1386 43.362 163.351 72.125 1.00 57.40 O
ATOM 11 C2' A B1386 43.758 163.501 69.715 1.00 60.52 C
ATOM 12 O2' A B1386 43.111 162.257 69.547 1.00 61.92 O
ATOM 13 C1' A B1386 43.236 164.490 68.673 1.00 61.40 C
ATOM 14 N9 A B1386 44.275 165.434 68.268 1.00 62.59 N
ATOM 15 C8 A B1386 44.301 166.801 68.423 1.00 64.35 C
ATOM 16 N7 A B1386 45.403 167.362 67.980 1.00 65.23 N
ATOM 17 C5 A B1386 46.151 166.294 67.499 1.00 64.41 C
ATOM 18 C6 A B1386 47.432 166.217 66.913 1.00 64.33 C
ATOM 19 N6 A B1386 48.222 167.277 66.717 1.00 63.92 N
ATOM 20 N1 A B1386 47.879 164.996 66.538 1.00 64.19 N
ATOM 21 C2 A B1386 47.094 163.931 66.749 1.00 63.31 C
ATOM 22 N3 A B1386 45.882 163.873 67.298 1.00 64.24 N
ATOM 23 C4 A B1386 45.462 165.103 67.656 1.00 64.39 C
ATOM 24 P C B1387 44.656 163.302 73.072 1.00 57.42 P
ATOM 25 OP1 C B1387 44.402 162.310 74.146 1.00 57.35 O
ATOM 26 OP2 C B1387 45.024 164.692 73.438 1.00 57.79 O
ATOM 27 O5' C B1387 45.791 162.726 72.116 1.00 53.40 O
TER
Atoms:
OP1: (44.062,180.298,66.281)
OP2: (46.465,180.005,67.161)
C3': (45.328,174.914,67.965)
C1': (47.074,174.341,66.473)
C5': (45.231,177.314,67.181)
O6: (52.661,173.988,68.600)
O4': (46.568,175.610,66.095)
C8: (49.010,175.758,67.281)
C2: (50.189,171.585,67.772)
C6: (51.570,173.552,68.228)
C5: (50.432,174.275,67.818)
C4: (49.312,173.583,67.415)
P: (45.419,179.714,66.134)
C4': (45.322,175.865,66.790)
C2': (46.035,173.689,67.395)
O2': (45.187,172.879,66.609)
N1: (51.352,172.182,68.172)
N2: (50.172,170.247,67.813)
N3: (49.121,172.250,67.368)
N7: (50.225,175.643,67.736)
N9: (48.403,174.548,67.044)
O5': (45.281,178.134,66.017)
O3': (43.979,174.688,68.348)
OP2: (46.465,180.005,67.161)
C3': (45.328,174.914,67.965)
C1': (47.074,174.341,66.473)
C5': (45.231,177.314,67.181)
O6: (52.661,173.988,68.600)
O4': (46.568,175.610,66.095)
C8: (49.010,175.758,67.281)
C2: (50.189,171.585,67.772)
C6: (51.570,173.552,68.228)
C5: (50.432,174.275,67.818)
C4: (49.312,173.583,67.415)
P: (45.419,179.714,66.134)
C4': (45.322,175.865,66.790)
C2': (46.035,173.689,67.395)
O2': (45.187,172.879,66.609)
N1: (51.352,172.182,68.172)
N2: (50.172,170.247,67.813)
N3: (49.121,172.250,67.368)
N7: (50.225,175.643,67.736)
N9: (48.403,174.548,67.044)
O5': (45.281,178.134,66.017)
O3': (43.979,174.688,68.348)
OP1: (41.435,168.761,70.490)
OP2: (41.823,168.858,73.041)
C3': (43.366,164.209,71.001)
C1': (43.236,164.490,68.673)
C5': (41.499,165.898,71.504)
O4': (42.178,165.217,69.281)
C8: (44.301,166.801,68.423)
O2': (43.111,162.257,69.547)
C6: (47.432,166.217,66.913)
C5: (46.151,166.294,67.499)
C4: (45.462,165.103,67.656)
P: (42.259,168.420,71.683)
C4': (41.997,164.759,70.647)
C2': (43.758,163.501,69.715)
C2: (47.094,163.931,66.749)
N1: (47.879,164.996,66.538)
N3: (45.882,163.873,67.298)
N6: (48.222,167.277,66.717)
N7: (45.403,167.362,67.980)
N9: (44.275,165.434,68.268)
O5': (42.544,166.854,71.692)
O3': (43.362,163.351,72.125)
OP2: (41.823,168.858,73.041)
C3': (43.366,164.209,71.001)
C1': (43.236,164.490,68.673)
C5': (41.499,165.898,71.504)
O4': (42.178,165.217,69.281)
C8: (44.301,166.801,68.423)
O2': (43.111,162.257,69.547)
C6: (47.432,166.217,66.913)
C5: (46.151,166.294,67.499)
C4: (45.462,165.103,67.656)
P: (42.259,168.420,71.683)
C4': (41.997,164.759,70.647)
C2': (43.758,163.501,69.715)
C2: (47.094,163.931,66.749)
N1: (47.879,164.996,66.538)
N3: (45.882,163.873,67.298)
N6: (48.222,167.277,66.717)
N7: (45.403,167.362,67.980)
N9: (44.275,165.434,68.268)
O5': (42.544,166.854,71.692)
O3': (43.362,163.351,72.125)
Image (generated by PyMOL):