Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:931:933
Extra
PDB:
ATOM 1 O3' C A 30 81.289 6.813 100.916 1.00 79.10 O
ATOM 2 P G A 31 82.719 7.499 100.662 1.00 80.94 P
ATOM 3 OP1 G A 31 83.748 6.525 101.110 1.00 81.64 O
ATOM 4 OP2 G A 31 82.696 8.855 101.263 1.00 82.06 O
ATOM 5 O5' G A 31 82.790 7.633 99.071 1.00 80.59 O
ATOM 6 C5' G A 31 82.802 6.451 98.246 1.00 80.65 C
ATOM 7 C4' G A 31 82.603 6.791 96.782 1.00 81.24 C
ATOM 8 O4' G A 31 81.294 7.369 96.558 1.00 81.21 O
ATOM 9 C3' G A 31 83.502 7.834 96.141 1.00 81.05 C
ATOM 10 O3' G A 31 84.808 7.333 95.882 1.00 83.57 O
ATOM 11 C2' G A 31 82.757 8.104 94.836 1.00 79.75 C
ATOM 12 O2' G A 31 82.986 7.108 93.862 1.00 77.23 O
ATOM 13 C1' G A 31 81.297 8.019 95.293 1.00 79.84 C
ATOM 14 N9 G A 31 80.661 9.330 95.416 1.00 78.98 N
ATOM 15 C8 G A 31 80.472 10.069 96.562 1.00 78.48 C
ATOM 16 N7 G A 31 79.897 11.220 96.339 1.00 77.76 N
ATOM 17 C5 G A 31 79.686 11.240 94.966 1.00 77.52 C
ATOM 18 C6 G A 31 79.104 12.236 94.139 1.00 76.88 C
ATOM 19 O6 G A 31 78.639 13.334 94.466 1.00 77.27 O
ATOM 20 N1 G A 31 79.096 11.851 92.803 1.00 75.62 N
ATOM 21 C2 G A 31 79.585 10.664 92.321 1.00 75.59 C
ATOM 22 N2 G A 31 79.495 10.482 90.997 1.00 74.37 N
ATOM 23 N3 G A 31 80.126 9.726 93.081 1.00 76.29 N
ATOM 24 C4 G A 31 80.145 10.079 94.383 1.00 77.36 C
ATOM 25 P U A 32 85.912 8.290 95.210 1.00 84.53 P
ATOM 26 OP1 U A 32 87.249 7.846 95.678 1.00 84.64 O
ATOM 27 OP2 U A 32 85.508 9.709 95.408 1.00 85.54 O
ATOM 28 O5' U A 32 85.790 7.953 93.660 1.00 84.12 O
TER
ATOM 1 O3' U B 32 86.543 9.156 89.084 1.00 84.93 O
ATOM 2 P A B 33 87.802 8.561 88.293 1.00 84.07 P
ATOM 3 OP1 A B 33 88.553 7.724 89.262 1.00 84.14 O
ATOM 4 OP2 A B 33 88.496 9.669 87.587 1.00 84.68 O
ATOM 5 O5' A B 33 87.141 7.606 87.208 1.00 82.30 O
ATOM 6 C5' A B 33 87.939 6.949 86.217 1.00 80.34 C
ATOM 7 C4' A B 33 87.182 6.878 84.918 1.00 79.53 C
ATOM 8 O4' A B 33 85.938 6.158 85.138 1.00 79.74 O
ATOM 9 C3' A B 33 86.742 8.220 84.361 1.00 78.87 C
ATOM 10 O3' A B 33 87.792 8.870 83.642 1.00 80.01 O
ATOM 11 C2' A B 33 85.538 7.828 83.513 1.00 78.44 C
ATOM 12 O2' A B 33 85.892 7.223 82.282 1.00 76.58 O
ATOM 13 C1' A B 33 84.885 6.781 84.417 1.00 77.85 C
ATOM 14 N9 A B 33 83.959 7.366 85.393 1.00 76.68 N
ATOM 15 C8 A B 33 84.258 7.835 86.655 1.00 75.72 C
ATOM 16 N7 A B 33 83.221 8.305 87.306 1.00 75.12 N
ATOM 17 C5 A B 33 82.166 8.136 86.419 1.00 74.76 C
ATOM 18 C6 A B 33 80.789 8.433 86.515 1.00 74.09 C
ATOM 19 N6 A B 33 80.220 8.985 87.592 1.00 73.10 N
ATOM 20 N1 A B 33 80.008 8.137 85.452 1.00 72.95 N
ATOM 21 C2 A B 33 80.579 7.582 84.372 1.00 73.46 C
ATOM 22 N3 A B 33 81.856 7.255 84.163 1.00 73.44 N
ATOM 23 C4 A B 33 82.606 7.561 85.235 1.00 74.85 C
ATOM 24 P C B 34 87.555 10.345 83.038 1.00 79.16 P
ATOM 25 OP1 C B 34 88.828 10.811 82.423 1.00 78.22 O
ATOM 26 OP2 C B 34 86.891 11.182 84.080 1.00 78.00 O
ATOM 27 O5' C B 34 86.520 10.081 81.859 1.00 75.30 O
TER
ATOM 2 P G A 31 82.719 7.499 100.662 1.00 80.94 P
ATOM 3 OP1 G A 31 83.748 6.525 101.110 1.00 81.64 O
ATOM 4 OP2 G A 31 82.696 8.855 101.263 1.00 82.06 O
ATOM 5 O5' G A 31 82.790 7.633 99.071 1.00 80.59 O
ATOM 6 C5' G A 31 82.802 6.451 98.246 1.00 80.65 C
ATOM 7 C4' G A 31 82.603 6.791 96.782 1.00 81.24 C
ATOM 8 O4' G A 31 81.294 7.369 96.558 1.00 81.21 O
ATOM 9 C3' G A 31 83.502 7.834 96.141 1.00 81.05 C
ATOM 10 O3' G A 31 84.808 7.333 95.882 1.00 83.57 O
ATOM 11 C2' G A 31 82.757 8.104 94.836 1.00 79.75 C
ATOM 12 O2' G A 31 82.986 7.108 93.862 1.00 77.23 O
ATOM 13 C1' G A 31 81.297 8.019 95.293 1.00 79.84 C
ATOM 14 N9 G A 31 80.661 9.330 95.416 1.00 78.98 N
ATOM 15 C8 G A 31 80.472 10.069 96.562 1.00 78.48 C
ATOM 16 N7 G A 31 79.897 11.220 96.339 1.00 77.76 N
ATOM 17 C5 G A 31 79.686 11.240 94.966 1.00 77.52 C
ATOM 18 C6 G A 31 79.104 12.236 94.139 1.00 76.88 C
ATOM 19 O6 G A 31 78.639 13.334 94.466 1.00 77.27 O
ATOM 20 N1 G A 31 79.096 11.851 92.803 1.00 75.62 N
ATOM 21 C2 G A 31 79.585 10.664 92.321 1.00 75.59 C
ATOM 22 N2 G A 31 79.495 10.482 90.997 1.00 74.37 N
ATOM 23 N3 G A 31 80.126 9.726 93.081 1.00 76.29 N
ATOM 24 C4 G A 31 80.145 10.079 94.383 1.00 77.36 C
ATOM 25 P U A 32 85.912 8.290 95.210 1.00 84.53 P
ATOM 26 OP1 U A 32 87.249 7.846 95.678 1.00 84.64 O
ATOM 27 OP2 U A 32 85.508 9.709 95.408 1.00 85.54 O
ATOM 28 O5' U A 32 85.790 7.953 93.660 1.00 84.12 O
TER
ATOM 1 O3' U B 32 86.543 9.156 89.084 1.00 84.93 O
ATOM 2 P A B 33 87.802 8.561 88.293 1.00 84.07 P
ATOM 3 OP1 A B 33 88.553 7.724 89.262 1.00 84.14 O
ATOM 4 OP2 A B 33 88.496 9.669 87.587 1.00 84.68 O
ATOM 5 O5' A B 33 87.141 7.606 87.208 1.00 82.30 O
ATOM 6 C5' A B 33 87.939 6.949 86.217 1.00 80.34 C
ATOM 7 C4' A B 33 87.182 6.878 84.918 1.00 79.53 C
ATOM 8 O4' A B 33 85.938 6.158 85.138 1.00 79.74 O
ATOM 9 C3' A B 33 86.742 8.220 84.361 1.00 78.87 C
ATOM 10 O3' A B 33 87.792 8.870 83.642 1.00 80.01 O
ATOM 11 C2' A B 33 85.538 7.828 83.513 1.00 78.44 C
ATOM 12 O2' A B 33 85.892 7.223 82.282 1.00 76.58 O
ATOM 13 C1' A B 33 84.885 6.781 84.417 1.00 77.85 C
ATOM 14 N9 A B 33 83.959 7.366 85.393 1.00 76.68 N
ATOM 15 C8 A B 33 84.258 7.835 86.655 1.00 75.72 C
ATOM 16 N7 A B 33 83.221 8.305 87.306 1.00 75.12 N
ATOM 17 C5 A B 33 82.166 8.136 86.419 1.00 74.76 C
ATOM 18 C6 A B 33 80.789 8.433 86.515 1.00 74.09 C
ATOM 19 N6 A B 33 80.220 8.985 87.592 1.00 73.10 N
ATOM 20 N1 A B 33 80.008 8.137 85.452 1.00 72.95 N
ATOM 21 C2 A B 33 80.579 7.582 84.372 1.00 73.46 C
ATOM 22 N3 A B 33 81.856 7.255 84.163 1.00 73.44 N
ATOM 23 C4 A B 33 82.606 7.561 85.235 1.00 74.85 C
ATOM 24 P C B 34 87.555 10.345 83.038 1.00 79.16 P
ATOM 25 OP1 C B 34 88.828 10.811 82.423 1.00 78.22 O
ATOM 26 OP2 C B 34 86.891 11.182 84.080 1.00 78.00 O
ATOM 27 O5' C B 34 86.520 10.081 81.859 1.00 75.30 O
TER
Atoms:
OP1: (83.748,6.525,101.110)
OP2: (82.696,8.855,101.263)
C3': (83.502,7.834,96.141)
C1': (81.297,8.019,95.293)
C5': (82.802,6.451,98.246)
O6: (78.639,13.334,94.466)
O4': (81.294,7.369,96.558)
C8: (80.472,10.069,96.562)
C2: (79.585,10.664,92.321)
C6: (79.104,12.236,94.139)
C5: (79.686,11.240,94.966)
C4: (80.145,10.079,94.383)
P: (82.719,7.499,100.662)
C4': (82.603,6.791,96.782)
C2': (82.757,8.104,94.836)
O2': (82.986,7.108,93.862)
N1: (79.096,11.851,92.803)
N2: (79.495,10.482,90.997)
N3: (80.126,9.726,93.081)
N7: (79.897,11.220,96.339)
N9: (80.661,9.330,95.416)
O5': (82.790,7.633,99.071)
O3': (84.808,7.333,95.882)
OP2: (82.696,8.855,101.263)
C3': (83.502,7.834,96.141)
C1': (81.297,8.019,95.293)
C5': (82.802,6.451,98.246)
O6: (78.639,13.334,94.466)
O4': (81.294,7.369,96.558)
C8: (80.472,10.069,96.562)
C2: (79.585,10.664,92.321)
C6: (79.104,12.236,94.139)
C5: (79.686,11.240,94.966)
C4: (80.145,10.079,94.383)
P: (82.719,7.499,100.662)
C4': (82.603,6.791,96.782)
C2': (82.757,8.104,94.836)
O2': (82.986,7.108,93.862)
N1: (79.096,11.851,92.803)
N2: (79.495,10.482,90.997)
N3: (80.126,9.726,93.081)
N7: (79.897,11.220,96.339)
N9: (80.661,9.330,95.416)
O5': (82.790,7.633,99.071)
O3': (84.808,7.333,95.882)
OP1: (88.553,7.724,89.262)
OP2: (88.496,9.669,87.587)
C3': (86.742,8.220,84.361)
C1': (84.885,6.781,84.417)
C5': (87.939,6.949,86.217)
O4': (85.938,6.158,85.138)
C8: (84.258,7.835,86.655)
O2': (85.892,7.223,82.282)
C6: (80.789,8.433,86.515)
C5: (82.166,8.136,86.419)
C4: (82.606,7.561,85.235)
P: (87.802,8.561,88.293)
C4': (87.182,6.878,84.918)
C2': (85.538,7.828,83.513)
C2: (80.579,7.582,84.372)
N1: (80.008,8.137,85.452)
N3: (81.856,7.255,84.163)
N6: (80.220,8.985,87.592)
N7: (83.221,8.305,87.306)
N9: (83.959,7.366,85.393)
O5': (87.141,7.606,87.208)
O3': (87.792,8.870,83.642)
OP2: (88.496,9.669,87.587)
C3': (86.742,8.220,84.361)
C1': (84.885,6.781,84.417)
C5': (87.939,6.949,86.217)
O4': (85.938,6.158,85.138)
C8: (84.258,7.835,86.655)
O2': (85.892,7.223,82.282)
C6: (80.789,8.433,86.515)
C5: (82.166,8.136,86.419)
C4: (82.606,7.561,85.235)
P: (87.802,8.561,88.293)
C4': (87.182,6.878,84.918)
C2': (85.538,7.828,83.513)
C2: (80.579,7.582,84.372)
N1: (80.008,8.137,85.452)
N3: (81.856,7.255,84.163)
N6: (80.220,8.985,87.592)
N7: (83.221,8.305,87.306)
N9: (83.959,7.366,85.393)
O5': (87.141,7.606,87.208)
O3': (87.792,8.870,83.642)
Image (generated by PyMOL):