ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:931:933

Extra

PDB:
ATOM 1 O3' C A 30 81.304 6.650 100.798 1.00 78.04 O
ATOM 2 P G A 31 82.727 7.375 100.606 1.00 79.85 P
ATOM 3 OP1 G A 31 83.758 6.409 101.068 1.00 80.18 O
ATOM 4 OP2 G A 31 82.668 8.723 101.226 1.00 80.83 O
ATOM 5 O5' G A 31 82.850 7.531 99.021 1.00 79.09 O
ATOM 6 C5' G A 31 82.849 6.361 98.184 1.00 78.80 C
ATOM 7 C4' G A 31 82.622 6.716 96.730 1.00 79.52 C
ATOM 8 O4' G A 31 81.315 7.309 96.530 1.00 79.35 O
ATOM 9 C3' G A 31 83.515 7.757 96.081 1.00 79.10 C
ATOM 10 O3' G A 31 84.821 7.248 95.836 1.00 81.54 O
ATOM 11 C2' G A 31 82.755 8.018 94.780 1.00 77.82 C
ATOM 12 O2' G A 31 82.964 7.022 93.801 1.00 74.88 O
ATOM 13 C1' G A 31 81.298 7.933 95.252 1.00 77.92 C
ATOM 14 N9 G A 31 80.659 9.246 95.353 1.00 77.40 N
ATOM 15 C8 G A 31 80.455 10.004 96.484 1.00 76.28 C
ATOM 16 N7 G A 31 79.895 11.156 96.232 1.00 75.20 N
ATOM 17 C5 G A 31 79.708 11.156 94.856 1.00 74.85 C
ATOM 18 C6 G A 31 79.155 12.144 94.004 1.00 74.07 C
ATOM 19 O6 G A 31 78.708 13.254 94.303 1.00 74.38 O
ATOM 20 N1 G A 31 79.159 11.734 92.675 1.00 73.28 N
ATOM 21 C2 G A 31 79.638 10.533 92.221 1.00 72.79 C
ATOM 22 N2 G A 31 79.556 10.323 90.901 1.00 71.68 N
ATOM 23 N3 G A 31 80.159 9.605 93.002 1.00 73.91 N
ATOM 24 C4 G A 31 80.163 9.981 94.299 1.00 75.58 C
ATOM 25 P U A 32 85.931 8.184 95.143 1.00 82.72 P
ATOM 26 OP1 U A 32 87.269 7.724 95.598 1.00 82.22 O
ATOM 27 OP2 U A 32 85.553 9.612 95.324 1.00 82.95 O
ATOM 28 O5' U A 32 85.790 7.820 93.600 1.00 82.91 O
TER

ATOM 1 O3' U B 32 86.505 9.005 89.015 1.00 85.29 O
ATOM 2 P A B 33 87.783 8.499 88.190 1.00 84.79 P
ATOM 3 OP1 A B 33 88.647 7.764 89.146 1.00 85.02 O
ATOM 4 OP2 A B 33 88.341 9.643 87.424 1.00 85.55 O
ATOM 5 O5' A B 33 87.178 7.452 87.160 1.00 83.40 O
ATOM 6 C5' A B 33 88.006 6.839 86.164 1.00 81.83 C
ATOM 7 C4' A B 33 87.260 6.763 84.860 1.00 80.66 C
ATOM 8 O4' A B 33 86.034 6.013 85.074 1.00 80.83 O
ATOM 9 C3' A B 33 86.790 8.100 84.314 1.00 79.89 C
ATOM 10 O3' A B 33 87.821 8.778 83.594 1.00 80.83 O
ATOM 11 C2' A B 33 85.592 7.688 83.468 1.00 79.71 C
ATOM 12 O2' A B 33 85.958 7.105 82.232 1.00 77.89 O
ATOM 13 C1' A B 33 84.965 6.620 84.364 1.00 79.78 C
ATOM 14 N9 A B 33 84.033 7.177 85.351 1.00 79.87 N
ATOM 15 C8 A B 33 84.318 7.571 86.640 1.00 79.51 C
ATOM 16 N7 A B 33 83.281 8.034 87.295 1.00 79.91 N
ATOM 17 C5 A B 33 82.239 7.940 86.381 1.00 79.65 C
ATOM 18 C6 A B 33 80.869 8.268 86.466 1.00 79.06 C
ATOM 19 N6 A B 33 80.291 8.775 87.562 1.00 78.14 N
ATOM 20 N1 A B 33 80.104 8.053 85.373 1.00 78.06 N
ATOM 21 C2 A B 33 80.681 7.538 84.277 1.00 78.32 C
ATOM 22 N3 A B 33 81.952 7.187 84.075 1.00 78.56 N
ATOM 23 C4 A B 33 82.689 7.415 85.177 1.00 79.47 C
ATOM 24 P C B 34 87.547 10.250 82.995 1.00 80.38 P
ATOM 25 OP1 C B 34 88.808 10.738 82.365 1.00 78.72 O
ATOM 26 OP2 C B 34 86.883 11.082 84.043 1.00 78.64 O
ATOM 27 O5' C B 34 86.505 9.962 81.826 1.00 76.36 O
TER

Atoms:
OP1: (83.758,6.409,101.068)
OP2: (82.668,8.723,101.226)
C3': (83.515,7.757,96.081)
C1': (81.298,7.933,95.252)
C5': (82.849,6.361,98.184)
O6: (78.708,13.254,94.303)
O4': (81.315,7.309,96.530)
C8: (80.455,10.004,96.484)
C2: (79.638,10.533,92.221)
C6: (79.155,12.144,94.004)
C5: (79.708,11.156,94.856)
C4: (80.163,9.981,94.299)
P: (82.727,7.375,100.606)
C4': (82.622,6.716,96.730)
C2': (82.755,8.018,94.780)
O2': (82.964,7.022,93.801)
N1: (79.159,11.734,92.675)
N2: (79.556,10.323,90.901)
N3: (80.159,9.605,93.002)
N7: (79.895,11.156,96.232)
N9: (80.659,9.246,95.353)
O5': (82.850,7.531,99.021)
O3': (84.821,7.248,95.836)
OP1: (88.647,7.764,89.146)
OP2: (88.341,9.643,87.424)
C3': (86.790,8.100,84.314)
C1': (84.965,6.620,84.364)
C5': (88.006,6.839,86.164)
O4': (86.034,6.013,85.074)
C8: (84.318,7.571,86.640)
O2': (85.958,7.105,82.232)
C6: (80.869,8.268,86.466)
C5: (82.239,7.940,86.381)
C4: (82.689,7.415,85.177)
P: (87.783,8.499,88.190)
C4': (87.260,6.763,84.860)
C2': (85.592,7.688,83.468)
C2: (80.681,7.538,84.277)
N1: (80.104,8.053,85.373)
N3: (81.952,7.187,84.075)
N6: (80.291,8.775,87.562)
N7: (83.281,8.034,87.295)
N9: (84.033,7.177,85.351)
O5': (87.178,7.452,87.160)
O3': (87.821,8.778,83.594)
Image (generated by PyMOL):
PyMOL image
show in jmol