Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:931:933
Extra
PDB:
ATOM 1 O3' C A 30 81.529 6.881 101.148 1.00 86.73 O
ATOM 2 P G A 31 82.930 7.634 100.927 1.00 87.70 P
ATOM 3 OP1 G A 31 83.989 6.716 101.426 1.00 87.79 O
ATOM 4 OP2 G A 31 82.829 9.001 101.491 1.00 88.74 O
ATOM 5 O5' G A 31 83.045 7.737 99.338 1.00 88.04 O
ATOM 6 C5' G A 31 83.050 6.540 98.536 1.00 88.99 C
ATOM 7 C4' G A 31 82.791 6.849 97.075 1.00 89.48 C
ATOM 8 O4' G A 31 81.483 7.443 96.900 1.00 90.29 O
ATOM 9 C3' G A 31 83.675 7.870 96.388 1.00 89.38 C
ATOM 10 O3' G A 31 84.952 7.330 96.082 1.00 91.78 O
ATOM 11 C2' G A 31 82.880 8.150 95.114 1.00 89.16 C
ATOM 12 O2' G A 31 83.070 7.166 94.118 1.00 88.13 O
ATOM 13 C1' G A 31 81.437 8.067 95.625 1.00 89.11 C
ATOM 14 N9 G A 31 80.784 9.370 95.743 1.00 89.05 N
ATOM 15 C8 G A 31 80.564 10.107 96.887 1.00 88.89 C
ATOM 16 N7 G A 31 79.980 11.252 96.655 1.00 88.60 N
ATOM 17 C5 G A 31 79.796 11.270 95.277 1.00 88.69 C
ATOM 18 C6 G A 31 79.217 12.259 94.436 1.00 88.83 C
ATOM 19 O6 G A 31 78.737 13.357 94.751 1.00 89.39 O
ATOM 20 N1 G A 31 79.235 11.866 93.099 1.00 87.46 N
ATOM 21 C2 G A 31 79.741 10.680 92.631 1.00 85.96 C
ATOM 22 N2 G A 31 79.664 10.482 91.312 1.00 84.69 N
ATOM 23 N3 G A 31 80.282 9.754 93.400 1.00 86.77 N
ATOM 24 C4 G A 31 80.279 10.113 94.702 1.00 88.07 C
ATOM 25 P U A 32 86.089 8.277 95.456 1.00 92.73 P
ATOM 26 OP1 U A 32 87.408 7.641 95.719 1.00 92.31 O
ATOM 27 OP2 U A 32 85.849 9.674 95.913 1.00 93.14 O
ATOM 28 O5' U A 32 85.802 8.203 93.892 1.00 92.90 O
TER
ATOM 1 O3' U B 32 86.559 9.169 89.289 1.00 94.82 O
ATOM 2 P A B 33 87.879 8.510 88.664 1.00 93.76 P
ATOM 3 OP1 A B 33 88.580 7.820 89.780 1.00 93.46 O
ATOM 4 OP2 A B 33 88.601 9.540 87.870 1.00 93.69 O
ATOM 5 O5' A B 33 87.300 7.414 87.667 1.00 92.45 O
ATOM 6 C5' A B 33 88.119 6.836 86.641 1.00 91.17 C
ATOM 7 C4' A B 33 87.391 6.874 85.323 1.00 89.85 C
ATOM 8 O4' A B 33 86.135 6.156 85.459 1.00 90.58 O
ATOM 9 C3' A B 33 86.976 8.255 84.846 1.00 88.79 C
ATOM 10 O3' A B 33 88.060 8.945 84.219 1.00 89.80 O
ATOM 11 C2' A B 33 85.802 7.926 83.931 1.00 88.80 C
ATOM 12 O2' A B 33 86.180 7.401 82.672 1.00 87.38 O
ATOM 13 C1' A B 33 85.112 6.827 84.738 1.00 89.15 C
ATOM 14 N9 A B 33 84.171 7.382 85.714 1.00 89.16 N
ATOM 15 C8 A B 33 84.447 7.808 86.995 1.00 88.80 C
ATOM 16 N7 A B 33 83.406 8.284 87.632 1.00 89.16 N
ATOM 17 C5 A B 33 82.369 8.159 86.715 1.00 89.05 C
ATOM 18 C6 A B 33 80.996 8.482 86.786 1.00 88.61 C
ATOM 19 N6 A B 33 80.413 9.014 87.867 1.00 87.50 N
ATOM 20 N1 A B 33 80.235 8.229 85.695 1.00 88.11 N
ATOM 21 C2 A B 33 80.821 7.681 84.616 1.00 88.38 C
ATOM 22 N3 A B 33 82.098 7.330 84.432 1.00 88.39 N
ATOM 23 C4 A B 33 82.827 7.601 85.529 1.00 88.76 C
ATOM 24 P C B 34 87.841 10.432 83.631 1.00 88.62 P
ATOM 25 OP1 C B 34 89.166 10.933 83.166 1.00 87.95 O
ATOM 26 OP2 C B 34 87.055 11.238 84.610 1.00 87.71 O
ATOM 27 O5' C B 34 86.943 10.175 82.343 1.00 85.80 O
TER
ATOM 2 P G A 31 82.930 7.634 100.927 1.00 87.70 P
ATOM 3 OP1 G A 31 83.989 6.716 101.426 1.00 87.79 O
ATOM 4 OP2 G A 31 82.829 9.001 101.491 1.00 88.74 O
ATOM 5 O5' G A 31 83.045 7.737 99.338 1.00 88.04 O
ATOM 6 C5' G A 31 83.050 6.540 98.536 1.00 88.99 C
ATOM 7 C4' G A 31 82.791 6.849 97.075 1.00 89.48 C
ATOM 8 O4' G A 31 81.483 7.443 96.900 1.00 90.29 O
ATOM 9 C3' G A 31 83.675 7.870 96.388 1.00 89.38 C
ATOM 10 O3' G A 31 84.952 7.330 96.082 1.00 91.78 O
ATOM 11 C2' G A 31 82.880 8.150 95.114 1.00 89.16 C
ATOM 12 O2' G A 31 83.070 7.166 94.118 1.00 88.13 O
ATOM 13 C1' G A 31 81.437 8.067 95.625 1.00 89.11 C
ATOM 14 N9 G A 31 80.784 9.370 95.743 1.00 89.05 N
ATOM 15 C8 G A 31 80.564 10.107 96.887 1.00 88.89 C
ATOM 16 N7 G A 31 79.980 11.252 96.655 1.00 88.60 N
ATOM 17 C5 G A 31 79.796 11.270 95.277 1.00 88.69 C
ATOM 18 C6 G A 31 79.217 12.259 94.436 1.00 88.83 C
ATOM 19 O6 G A 31 78.737 13.357 94.751 1.00 89.39 O
ATOM 20 N1 G A 31 79.235 11.866 93.099 1.00 87.46 N
ATOM 21 C2 G A 31 79.741 10.680 92.631 1.00 85.96 C
ATOM 22 N2 G A 31 79.664 10.482 91.312 1.00 84.69 N
ATOM 23 N3 G A 31 80.282 9.754 93.400 1.00 86.77 N
ATOM 24 C4 G A 31 80.279 10.113 94.702 1.00 88.07 C
ATOM 25 P U A 32 86.089 8.277 95.456 1.00 92.73 P
ATOM 26 OP1 U A 32 87.408 7.641 95.719 1.00 92.31 O
ATOM 27 OP2 U A 32 85.849 9.674 95.913 1.00 93.14 O
ATOM 28 O5' U A 32 85.802 8.203 93.892 1.00 92.90 O
TER
ATOM 1 O3' U B 32 86.559 9.169 89.289 1.00 94.82 O
ATOM 2 P A B 33 87.879 8.510 88.664 1.00 93.76 P
ATOM 3 OP1 A B 33 88.580 7.820 89.780 1.00 93.46 O
ATOM 4 OP2 A B 33 88.601 9.540 87.870 1.00 93.69 O
ATOM 5 O5' A B 33 87.300 7.414 87.667 1.00 92.45 O
ATOM 6 C5' A B 33 88.119 6.836 86.641 1.00 91.17 C
ATOM 7 C4' A B 33 87.391 6.874 85.323 1.00 89.85 C
ATOM 8 O4' A B 33 86.135 6.156 85.459 1.00 90.58 O
ATOM 9 C3' A B 33 86.976 8.255 84.846 1.00 88.79 C
ATOM 10 O3' A B 33 88.060 8.945 84.219 1.00 89.80 O
ATOM 11 C2' A B 33 85.802 7.926 83.931 1.00 88.80 C
ATOM 12 O2' A B 33 86.180 7.401 82.672 1.00 87.38 O
ATOM 13 C1' A B 33 85.112 6.827 84.738 1.00 89.15 C
ATOM 14 N9 A B 33 84.171 7.382 85.714 1.00 89.16 N
ATOM 15 C8 A B 33 84.447 7.808 86.995 1.00 88.80 C
ATOM 16 N7 A B 33 83.406 8.284 87.632 1.00 89.16 N
ATOM 17 C5 A B 33 82.369 8.159 86.715 1.00 89.05 C
ATOM 18 C6 A B 33 80.996 8.482 86.786 1.00 88.61 C
ATOM 19 N6 A B 33 80.413 9.014 87.867 1.00 87.50 N
ATOM 20 N1 A B 33 80.235 8.229 85.695 1.00 88.11 N
ATOM 21 C2 A B 33 80.821 7.681 84.616 1.00 88.38 C
ATOM 22 N3 A B 33 82.098 7.330 84.432 1.00 88.39 N
ATOM 23 C4 A B 33 82.827 7.601 85.529 1.00 88.76 C
ATOM 24 P C B 34 87.841 10.432 83.631 1.00 88.62 P
ATOM 25 OP1 C B 34 89.166 10.933 83.166 1.00 87.95 O
ATOM 26 OP2 C B 34 87.055 11.238 84.610 1.00 87.71 O
ATOM 27 O5' C B 34 86.943 10.175 82.343 1.00 85.80 O
TER
Atoms:
OP1: (83.989,6.716,101.426)
OP2: (82.829,9.001,101.491)
C3': (83.675,7.870,96.388)
C1': (81.437,8.067,95.625)
C5': (83.050,6.540,98.536)
O6: (78.737,13.357,94.751)
O4': (81.483,7.443,96.900)
C8: (80.564,10.107,96.887)
C2: (79.741,10.680,92.631)
C6: (79.217,12.259,94.436)
C5: (79.796,11.270,95.277)
C4: (80.279,10.113,94.702)
P: (82.930,7.634,100.927)
C4': (82.791,6.849,97.075)
C2': (82.880,8.150,95.114)
O2': (83.070,7.166,94.118)
N1: (79.235,11.866,93.099)
N2: (79.664,10.482,91.312)
N3: (80.282,9.754,93.400)
N7: (79.980,11.252,96.655)
N9: (80.784,9.370,95.743)
O5': (83.045,7.737,99.338)
O3': (84.952,7.330,96.082)
OP2: (82.829,9.001,101.491)
C3': (83.675,7.870,96.388)
C1': (81.437,8.067,95.625)
C5': (83.050,6.540,98.536)
O6: (78.737,13.357,94.751)
O4': (81.483,7.443,96.900)
C8: (80.564,10.107,96.887)
C2: (79.741,10.680,92.631)
C6: (79.217,12.259,94.436)
C5: (79.796,11.270,95.277)
C4: (80.279,10.113,94.702)
P: (82.930,7.634,100.927)
C4': (82.791,6.849,97.075)
C2': (82.880,8.150,95.114)
O2': (83.070,7.166,94.118)
N1: (79.235,11.866,93.099)
N2: (79.664,10.482,91.312)
N3: (80.282,9.754,93.400)
N7: (79.980,11.252,96.655)
N9: (80.784,9.370,95.743)
O5': (83.045,7.737,99.338)
O3': (84.952,7.330,96.082)
OP1: (88.580,7.820,89.780)
OP2: (88.601,9.540,87.870)
C3': (86.976,8.255,84.846)
C1': (85.112,6.827,84.738)
C5': (88.119,6.836,86.641)
O4': (86.135,6.156,85.459)
C8: (84.447,7.808,86.995)
O2': (86.180,7.401,82.672)
C6: (80.996,8.482,86.786)
C5: (82.369,8.159,86.715)
C4: (82.827,7.601,85.529)
P: (87.879,8.510,88.664)
C4': (87.391,6.874,85.323)
C2': (85.802,7.926,83.931)
C2: (80.821,7.681,84.616)
N1: (80.235,8.229,85.695)
N3: (82.098,7.330,84.432)
N6: (80.413,9.014,87.867)
N7: (83.406,8.284,87.632)
N9: (84.171,7.382,85.714)
O5': (87.300,7.414,87.667)
O3': (88.060,8.945,84.219)
OP2: (88.601,9.540,87.870)
C3': (86.976,8.255,84.846)
C1': (85.112,6.827,84.738)
C5': (88.119,6.836,86.641)
O4': (86.135,6.156,85.459)
C8: (84.447,7.808,86.995)
O2': (86.180,7.401,82.672)
C6: (80.996,8.482,86.786)
C5: (82.369,8.159,86.715)
C4: (82.827,7.601,85.529)
P: (87.879,8.510,88.664)
C4': (87.391,6.874,85.323)
C2': (85.802,7.926,83.931)
C2: (80.821,7.681,84.616)
N1: (80.235,8.229,85.695)
N3: (82.098,7.330,84.432)
N6: (80.413,9.014,87.867)
N7: (83.406,8.284,87.632)
N9: (84.171,7.382,85.714)
O5': (87.300,7.414,87.667)
O3': (88.060,8.945,84.219)
Image (generated by PyMOL):