ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:931:933

Extra

PDB:
ATOM 1 O3' C A 30 81.254 6.750 100.701 1.00 87.91 O
ATOM 2 P G A 31 82.676 7.467 100.475 1.00 89.38 P
ATOM 3 OP1 G A 31 83.710 6.519 100.972 1.00 89.37 O
ATOM 4 OP2 G A 31 82.611 8.834 101.047 1.00 90.25 O
ATOM 5 O5' G A 31 82.786 7.586 98.885 1.00 88.97 O
ATOM 6 C5' G A 31 82.778 6.398 98.069 1.00 88.80 C
ATOM 7 C4' G A 31 82.567 6.728 96.603 1.00 88.56 C
ATOM 8 O4' G A 31 81.280 7.356 96.391 1.00 88.83 O
ATOM 9 C3' G A 31 83.488 7.729 95.930 1.00 87.57 C
ATOM 10 O3' G A 31 84.775 7.185 95.666 1.00 88.96 O
ATOM 11 C2' G A 31 82.735 7.986 94.626 1.00 86.41 C
ATOM 12 O2' G A 31 82.916 6.946 93.685 1.00 83.82 O
ATOM 13 C1' G A 31 81.280 7.964 95.105 1.00 86.85 C
ATOM 14 N9 G A 31 80.691 9.300 95.197 1.00 86.53 N
ATOM 15 C8 G A 31 80.561 10.089 96.318 1.00 86.20 C
ATOM 16 N7 G A 31 80.023 11.252 96.065 1.00 85.68 N
ATOM 17 C5 G A 31 79.776 11.227 94.699 1.00 85.43 C
ATOM 18 C6 G A 31 79.210 12.212 93.849 1.00 85.27 C
ATOM 19 O6 G A 31 78.803 13.343 94.143 1.00 86.12 O
ATOM 20 N1 G A 31 79.145 11.773 92.531 1.00 84.12 N
ATOM 21 C2 G A 31 79.570 10.549 92.086 1.00 83.72 C
ATOM 22 N2 G A 31 79.425 10.313 90.778 1.00 83.51 N
ATOM 23 N3 G A 31 80.100 9.625 92.864 1.00 84.61 N
ATOM 24 C4 G A 31 80.173 10.028 94.150 1.00 85.39 C
ATOM 25 P U A 32 85.914 8.112 95.016 1.00 89.22 P
ATOM 26 OP1 U A 32 87.227 7.630 95.511 1.00 88.81 O
ATOM 27 OP2 U A 32 85.544 9.544 95.203 1.00 89.26 O
ATOM 28 O5' U A 32 85.816 7.773 93.464 1.00 89.34 O
TER

ATOM 1 O3' U B 32 86.464 8.987 88.893 1.00 91.82 O
ATOM 2 P A B 33 87.654 8.256 88.114 1.00 90.91 P
ATOM 3 OP1 A B 33 88.200 7.233 89.044 1.00 91.02 O
ATOM 4 OP2 A B 33 88.550 9.298 87.552 1.00 90.54 O
ATOM 5 O5' A B 33 86.927 7.505 86.918 1.00 89.32 O
ATOM 6 C5' A B 33 87.671 6.711 85.984 1.00 88.41 C
ATOM 7 C4' A B 33 86.940 6.654 84.671 1.00 88.17 C
ATOM 8 O4' A B 33 85.679 5.953 84.853 1.00 88.97 O
ATOM 9 C3' A B 33 86.543 8.010 84.118 1.00 87.72 C
ATOM 10 O3' A B 33 87.618 8.652 83.435 1.00 87.73 O
ATOM 11 C2' A B 33 85.332 7.660 83.262 1.00 87.69 C
ATOM 12 O2' A B 33 85.673 7.050 82.030 1.00 85.56 O
ATOM 13 C1' A B 33 84.641 6.635 84.162 1.00 88.08 C
ATOM 14 N9 A B 33 83.767 7.248 85.172 1.00 88.86 N
ATOM 15 C8 A B 33 84.126 7.670 86.435 1.00 88.82 C
ATOM 16 N7 A B 33 83.133 8.165 87.132 1.00 89.04 N
ATOM 17 C5 A B 33 82.043 8.070 86.276 1.00 88.67 C
ATOM 18 C6 A B 33 80.684 8.418 86.430 1.00 88.28 C
ATOM 19 N6 A B 33 80.170 8.937 87.551 1.00 86.69 N
ATOM 20 N1 A B 33 79.860 8.201 85.381 1.00 88.39 N
ATOM 21 C2 A B 33 80.370 7.657 84.264 1.00 88.78 C
ATOM 22 N3 A B 33 81.623 7.277 84.004 1.00 88.89 N
ATOM 23 C4 A B 33 82.420 7.514 85.061 1.00 88.77 C
ATOM 24 P C B 34 87.444 10.166 82.918 1.00 86.28 P
ATOM 25 OP1 C B 34 88.763 10.654 82.433 1.00 86.46 O
ATOM 26 OP2 C B 34 86.710 10.952 83.949 1.00 85.71 O
ATOM 27 O5' C B 34 86.502 9.980 81.651 1.00 83.99 O
TER

Atoms:
OP1: (83.710,6.519,100.972)
OP2: (82.611,8.834,101.047)
C3': (83.488,7.729,95.930)
C1': (81.280,7.964,95.105)
C5': (82.778,6.398,98.069)
O6: (78.803,13.343,94.143)
O4': (81.280,7.356,96.391)
C8: (80.561,10.089,96.318)
C2: (79.570,10.549,92.086)
C6: (79.210,12.212,93.849)
C5: (79.776,11.227,94.699)
C4: (80.173,10.028,94.150)
P: (82.676,7.467,100.475)
C4': (82.567,6.728,96.603)
C2': (82.735,7.986,94.626)
O2': (82.916,6.946,93.685)
N1: (79.145,11.773,92.531)
N2: (79.425,10.313,90.778)
N3: (80.100,9.625,92.864)
N7: (80.023,11.252,96.065)
N9: (80.691,9.300,95.197)
O5': (82.786,7.586,98.885)
O3': (84.775,7.185,95.666)
OP1: (88.200,7.233,89.044)
OP2: (88.550,9.298,87.552)
C3': (86.543,8.010,84.118)
C1': (84.641,6.635,84.162)
C5': (87.671,6.711,85.984)
O4': (85.679,5.953,84.853)
C8: (84.126,7.670,86.435)
O2': (85.673,7.050,82.030)
C6: (80.684,8.418,86.430)
C5: (82.043,8.070,86.276)
C4: (82.420,7.514,85.061)
P: (87.654,8.256,88.114)
C4': (86.940,6.654,84.671)
C2': (85.332,7.660,83.262)
C2: (80.370,7.657,84.264)
N1: (79.860,8.201,85.381)
N3: (81.623,7.277,84.004)
N6: (80.170,8.937,87.551)
N7: (83.133,8.165,87.132)
N9: (83.767,7.248,85.172)
O5': (86.927,7.505,86.918)
O3': (87.618,8.652,83.435)
Image (generated by PyMOL):
PyMOL image
show in jmol