ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:X140:X60

Extra

PDB:
ATOM 1 O3' A A 139 27.046 17.806 23.156 1.00 18.42 O
ATOM 2 P A A 140 28.130 18.454 24.171 1.00 18.21 P
ATOM 3 OP1 A A 140 28.632 17.423 25.115 1.00 19.83 O
ATOM 4 OP2 A A 140 27.424 19.587 24.750 1.00 17.16 O
ATOM 5 O5' A A 140 29.273 18.891 23.143 1.00 20.33 O
ATOM 6 C5' A A 140 29.524 20.230 22.740 1.00 17.34 C
ATOM 7 C4' A A 140 29.876 20.262 21.277 1.00 15.30 C
ATOM 8 O4' A A 140 30.895 19.269 21.029 1.00 16.94 O
ATOM 9 C3' A A 140 28.721 19.864 20.374 1.00 17.13 C
ATOM 10 O3' A A 140 27.929 21.000 20.069 1.00 16.58 O
ATOM 11 C2' A A 140 29.404 19.215 19.177 1.00 14.12 C
ATOM 12 O2' A A 140 29.875 20.209 18.275 1.00 17.82 O
ATOM 13 C1' A A 140 30.645 18.583 19.822 1.00 17.42 C
ATOM 14 N9 A A 140 30.577 17.142 20.151 1.00 18.04 N
ATOM 15 C8 A A 140 30.002 16.536 21.241 1.00 19.03 C
ATOM 16 N7 A A 140 30.149 15.232 21.263 1.00 19.65 N
ATOM 17 C5 A A 140 30.909 14.953 20.134 1.00 17.84 C
ATOM 18 C6 A A 140 31.418 13.760 19.598 1.00 19.78 C
ATOM 19 N6 A A 140 31.257 12.548 20.139 1.00 18.74 N
ATOM 20 N1 A A 140 32.129 13.843 18.461 1.00 20.51 N
ATOM 21 C2 A A 140 32.317 15.047 17.911 1.00 19.63 C
ATOM 22 N3 A A 140 31.892 16.239 18.326 1.00 19.40 N
ATOM 23 C4 A A 140 31.190 16.120 19.457 1.00 17.77 C
ATOM 24 P A A 141 26.393 21.086 20.472 1.00 14.94 P
ATOM 25 OP1 A A 141 26.254 20.899 21.940 1.00 16.72 O
ATOM 26 OP2 A A 141 25.666 20.184 19.554 1.00 15.36 O
ATOM 27 O5' A A 141 26.070 22.596 20.142 1.00 15.51 O
TER

ATOM 1 O3' A B 59 33.408 10.401 18.792 1.00 20.81 O
ATOM 2 P C B 60 32.774 9.128 19.555 1.00 23.54 P
ATOM 3 OP1 C B 60 31.359 9.518 19.827 1.00 23.14 O
ATOM 4 OP2 C B 60 33.662 8.727 20.668 1.00 20.78 O
ATOM 5 O5' C B 60 32.844 8.015 18.453 1.00 23.41 O
ATOM 6 C5' C B 60 32.050 8.128 17.290 1.00 21.32 C
ATOM 7 C4' C B 60 32.760 7.470 16.141 1.00 24.96 C
ATOM 8 O4' C B 60 34.090 8.036 15.961 1.00 25.19 O
ATOM 9 C3' C B 60 33.058 5.993 16.305 1.00 24.24 C
ATOM 10 O3' C B 60 31.903 5.189 16.174 1.00 27.84 O
ATOM 11 C2' C B 60 34.109 5.787 15.221 1.00 24.54 C
ATOM 12 O2' C B 60 33.508 5.836 13.939 1.00 25.72 O
ATOM 13 C1' C B 60 34.943 7.056 15.411 1.00 22.05 C
ATOM 14 N1 C B 60 36.053 6.794 16.334 1.00 24.54 N
ATOM 15 C2 C B 60 37.161 6.135 15.817 1.00 27.52 C
ATOM 16 O2 C B 60 37.152 5.820 14.626 1.00 27.30 O
ATOM 17 N3 C B 60 38.207 5.857 16.618 1.00 26.53 N
ATOM 18 C4 C B 60 38.164 6.194 17.900 1.00 27.14 C
ATOM 19 N4 C B 60 39.226 5.879 18.646 1.00 25.62 N
ATOM 20 C5 C B 60 37.041 6.865 18.463 1.00 23.17 C
ATOM 21 C6 C B 60 36.012 7.139 17.651 1.00 22.52 C
ATOM 22 P G B 61 31.867 3.736 16.879 1.00 31.40 P
ATOM 23 OP1 G B 61 30.467 3.342 16.577 1.00 28.59 O
ATOM 24 OP2 G B 61 32.364 3.790 18.283 1.00 29.80 O
ATOM 25 O5' G B 61 32.907 2.900 16.015 1.00 26.33 O
TER

Atoms:
OP1: (28.632,17.423,25.115)
OP2: (27.424,19.587,24.750)
C3': (28.721,19.864,20.374)
C1': (30.645,18.583,19.822)
C5': (29.524,20.230,22.740)
O4': (30.895,19.269,21.029)
C8: (30.002,16.536,21.241)
O2': (29.875,20.209,18.275)
C6: (31.418,13.760,19.598)
C5: (30.909,14.953,20.134)
C4: (31.190,16.120,19.457)
P: (28.130,18.454,24.171)
C4': (29.876,20.262,21.277)
C2': (29.404,19.215,19.177)
C2: (32.317,15.047,17.911)
N1: (32.129,13.843,18.461)
N3: (31.892,16.239,18.326)
N6: (31.257,12.548,20.139)
N7: (30.149,15.232,21.263)
N9: (30.577,17.142,20.151)
O5': (29.273,18.891,23.143)
O3': (27.929,21.000,20.069)
C2: (37.161,6.135,15.817)
OP1: (31.359,9.518,19.827)
OP2: (33.662,8.727,20.668)
C4: (38.164,6.194,17.900)
O5': (32.844,8.015,18.453)
C3': (33.058,5.993,16.305)
C1': (34.943,7.056,15.411)
O4': (34.090,8.036,15.961)
C5': (32.050,8.128,17.290)
P: (32.774,9.128,19.555)
O2: (37.152,5.820,14.626)
C4': (32.760,7.470,16.141)
C2': (34.109,5.787,15.221)
O2': (33.508,5.836,13.939)
N1: (36.053,6.794,16.334)
N3: (38.207,5.857,16.618)
N4: (39.226,5.879,18.646)
C6: (36.012,7.139,17.651)
C5: (37.041,6.865,18.463)
O3': (31.903,5.189,16.174)
Image (generated by PyMOL):
PyMOL image
show in jmol