Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01384:01386
Extra
PDB:
ATOM 1 O3' A A1383 46.121 180.074 64.659 1.00 63.66 O
ATOM 2 P G A1384 45.605 179.716 66.136 1.00 65.82 P
ATOM 3 OP1 G A1384 44.353 180.481 66.375 1.00 65.37 O
ATOM 4 OP2 G A1384 46.736 179.834 67.103 1.00 65.46 O
ATOM 5 O5' G A1384 45.256 178.171 66.017 1.00 62.81 O
ATOM 6 C5' G A1384 45.183 177.353 67.179 1.00 60.70 C
ATOM 7 C4' G A1384 45.249 175.905 66.790 1.00 59.30 C
ATOM 8 O4' G A1384 46.457 175.653 66.034 1.00 58.40 O
ATOM 9 C3' G A1384 45.318 174.965 67.972 1.00 57.67 C
ATOM 10 O3' G A1384 43.999 174.702 68.415 1.00 59.45 O
ATOM 11 C2' G A1384 46.012 173.747 67.386 1.00 56.26 C
ATOM 12 O2' G A1384 45.112 172.948 66.655 1.00 54.11 O
ATOM 13 C1' G A1384 47.006 174.404 66.419 1.00 56.72 C
ATOM 14 N9 G A1384 48.341 174.661 66.955 1.00 55.94 N
ATOM 15 C8 G A1384 48.914 175.894 67.156 1.00 56.35 C
ATOM 16 N7 G A1384 50.134 175.826 67.606 1.00 55.27 N
ATOM 17 C5 G A1384 50.382 174.468 67.716 1.00 54.28 C
ATOM 18 C6 G A1384 51.541 173.793 68.136 1.00 54.51 C
ATOM 19 O6 G A1384 52.622 174.276 68.489 1.00 54.61 O
ATOM 20 N1 G A1384 51.367 172.414 68.112 1.00 54.16 N
ATOM 21 C2 G A1384 50.221 171.772 67.722 1.00 53.75 C
ATOM 22 N2 G A1384 50.242 170.436 67.783 1.00 53.18 N
ATOM 23 N3 G A1384 49.133 172.394 67.308 1.00 54.29 N
ATOM 24 C4 G A1384 49.282 173.734 67.332 1.00 54.50 C
ATOM 25 P C A1385 43.696 174.590 69.982 1.00 61.77 P
ATOM 26 OP1 C A1385 42.234 174.739 70.178 1.00 61.49 O
ATOM 27 OP2 C A1385 44.624 175.496 70.709 1.00 61.27 O
ATOM 28 O5' C A1385 44.088 173.082 70.294 1.00 62.03 O
TER
ATOM 1 O3' C B1385 43.891 169.002 71.457 1.00 67.08 O
ATOM 2 P A B1386 42.438 168.344 71.582 1.00 68.59 P
ATOM 3 OP1 A B1386 41.550 168.932 70.541 1.00 66.92 O
ATOM 4 OP2 A B1386 42.070 168.449 73.023 1.00 66.89 O
ATOM 5 O5' A B1386 42.722 166.832 71.185 1.00 65.81 O
ATOM 6 C5' A B1386 41.707 165.831 71.250 1.00 63.77 C
ATOM 7 C4' A B1386 42.164 164.617 70.490 1.00 62.81 C
ATOM 8 O4' A B1386 42.298 164.971 69.089 1.00 63.07 O
ATOM 9 C3' A B1386 43.550 164.133 70.867 1.00 60.97 C
ATOM 10 O3' A B1386 43.540 163.328 72.027 1.00 59.02 O
ATOM 11 C2' A B1386 43.983 163.400 69.612 1.00 61.11 C
ATOM 12 O2' A B1386 43.369 162.140 69.474 1.00 61.18 O
ATOM 13 C1' A B1386 43.437 164.336 68.537 1.00 62.90 C
ATOM 14 N9 A B1386 44.402 165.376 68.192 1.00 65.74 N
ATOM 15 C8 A B1386 44.327 166.726 68.458 1.00 66.86 C
ATOM 16 N7 A B1386 45.384 167.401 68.072 1.00 68.87 N
ATOM 17 C5 A B1386 46.209 166.433 67.505 1.00 69.61 C
ATOM 18 C6 A B1386 47.498 166.498 66.926 1.00 69.91 C
ATOM 19 N6 A B1386 48.215 167.624 66.837 1.00 69.95 N
ATOM 20 N1 A B1386 48.031 165.349 66.445 1.00 69.20 N
ATOM 21 C2 A B1386 47.320 164.217 66.554 1.00 68.24 C
ATOM 22 N3 A B1386 46.112 164.026 67.088 1.00 68.00 N
ATOM 23 C4 A B1386 45.606 165.185 67.553 1.00 68.09 C
ATOM 24 P C B1387 44.841 163.286 72.960 1.00 58.64 P
ATOM 25 OP1 C B1387 44.575 162.304 74.033 1.00 58.94 O
ATOM 26 OP2 C B1387 45.226 164.673 73.321 1.00 59.34 O
ATOM 27 O5' C B1387 45.967 162.702 72.000 1.00 54.82 O
TER
ATOM 2 P G A1384 45.605 179.716 66.136 1.00 65.82 P
ATOM 3 OP1 G A1384 44.353 180.481 66.375 1.00 65.37 O
ATOM 4 OP2 G A1384 46.736 179.834 67.103 1.00 65.46 O
ATOM 5 O5' G A1384 45.256 178.171 66.017 1.00 62.81 O
ATOM 6 C5' G A1384 45.183 177.353 67.179 1.00 60.70 C
ATOM 7 C4' G A1384 45.249 175.905 66.790 1.00 59.30 C
ATOM 8 O4' G A1384 46.457 175.653 66.034 1.00 58.40 O
ATOM 9 C3' G A1384 45.318 174.965 67.972 1.00 57.67 C
ATOM 10 O3' G A1384 43.999 174.702 68.415 1.00 59.45 O
ATOM 11 C2' G A1384 46.012 173.747 67.386 1.00 56.26 C
ATOM 12 O2' G A1384 45.112 172.948 66.655 1.00 54.11 O
ATOM 13 C1' G A1384 47.006 174.404 66.419 1.00 56.72 C
ATOM 14 N9 G A1384 48.341 174.661 66.955 1.00 55.94 N
ATOM 15 C8 G A1384 48.914 175.894 67.156 1.00 56.35 C
ATOM 16 N7 G A1384 50.134 175.826 67.606 1.00 55.27 N
ATOM 17 C5 G A1384 50.382 174.468 67.716 1.00 54.28 C
ATOM 18 C6 G A1384 51.541 173.793 68.136 1.00 54.51 C
ATOM 19 O6 G A1384 52.622 174.276 68.489 1.00 54.61 O
ATOM 20 N1 G A1384 51.367 172.414 68.112 1.00 54.16 N
ATOM 21 C2 G A1384 50.221 171.772 67.722 1.00 53.75 C
ATOM 22 N2 G A1384 50.242 170.436 67.783 1.00 53.18 N
ATOM 23 N3 G A1384 49.133 172.394 67.308 1.00 54.29 N
ATOM 24 C4 G A1384 49.282 173.734 67.332 1.00 54.50 C
ATOM 25 P C A1385 43.696 174.590 69.982 1.00 61.77 P
ATOM 26 OP1 C A1385 42.234 174.739 70.178 1.00 61.49 O
ATOM 27 OP2 C A1385 44.624 175.496 70.709 1.00 61.27 O
ATOM 28 O5' C A1385 44.088 173.082 70.294 1.00 62.03 O
TER
ATOM 1 O3' C B1385 43.891 169.002 71.457 1.00 67.08 O
ATOM 2 P A B1386 42.438 168.344 71.582 1.00 68.59 P
ATOM 3 OP1 A B1386 41.550 168.932 70.541 1.00 66.92 O
ATOM 4 OP2 A B1386 42.070 168.449 73.023 1.00 66.89 O
ATOM 5 O5' A B1386 42.722 166.832 71.185 1.00 65.81 O
ATOM 6 C5' A B1386 41.707 165.831 71.250 1.00 63.77 C
ATOM 7 C4' A B1386 42.164 164.617 70.490 1.00 62.81 C
ATOM 8 O4' A B1386 42.298 164.971 69.089 1.00 63.07 O
ATOM 9 C3' A B1386 43.550 164.133 70.867 1.00 60.97 C
ATOM 10 O3' A B1386 43.540 163.328 72.027 1.00 59.02 O
ATOM 11 C2' A B1386 43.983 163.400 69.612 1.00 61.11 C
ATOM 12 O2' A B1386 43.369 162.140 69.474 1.00 61.18 O
ATOM 13 C1' A B1386 43.437 164.336 68.537 1.00 62.90 C
ATOM 14 N9 A B1386 44.402 165.376 68.192 1.00 65.74 N
ATOM 15 C8 A B1386 44.327 166.726 68.458 1.00 66.86 C
ATOM 16 N7 A B1386 45.384 167.401 68.072 1.00 68.87 N
ATOM 17 C5 A B1386 46.209 166.433 67.505 1.00 69.61 C
ATOM 18 C6 A B1386 47.498 166.498 66.926 1.00 69.91 C
ATOM 19 N6 A B1386 48.215 167.624 66.837 1.00 69.95 N
ATOM 20 N1 A B1386 48.031 165.349 66.445 1.00 69.20 N
ATOM 21 C2 A B1386 47.320 164.217 66.554 1.00 68.24 C
ATOM 22 N3 A B1386 46.112 164.026 67.088 1.00 68.00 N
ATOM 23 C4 A B1386 45.606 165.185 67.553 1.00 68.09 C
ATOM 24 P C B1387 44.841 163.286 72.960 1.00 58.64 P
ATOM 25 OP1 C B1387 44.575 162.304 74.033 1.00 58.94 O
ATOM 26 OP2 C B1387 45.226 164.673 73.321 1.00 59.34 O
ATOM 27 O5' C B1387 45.967 162.702 72.000 1.00 54.82 O
TER
Atoms:
OP1: (44.353,180.481,66.375)
OP2: (46.736,179.834,67.103)
C3': (45.318,174.965,67.972)
C1': (47.006,174.404,66.419)
C5': (45.183,177.353,67.179)
O6: (52.622,174.276,68.489)
O4': (46.457,175.653,66.034)
C8: (48.914,175.894,67.156)
C2: (50.221,171.772,67.722)
C6: (51.541,173.793,68.136)
C5: (50.382,174.468,67.716)
C4: (49.282,173.734,67.332)
P: (45.605,179.716,66.136)
C4': (45.249,175.905,66.790)
C2': (46.012,173.747,67.386)
O2': (45.112,172.948,66.655)
N1: (51.367,172.414,68.112)
N2: (50.242,170.436,67.783)
N3: (49.133,172.394,67.308)
N7: (50.134,175.826,67.606)
N9: (48.341,174.661,66.955)
O5': (45.256,178.171,66.017)
O3': (43.999,174.702,68.415)
OP2: (46.736,179.834,67.103)
C3': (45.318,174.965,67.972)
C1': (47.006,174.404,66.419)
C5': (45.183,177.353,67.179)
O6: (52.622,174.276,68.489)
O4': (46.457,175.653,66.034)
C8: (48.914,175.894,67.156)
C2: (50.221,171.772,67.722)
C6: (51.541,173.793,68.136)
C5: (50.382,174.468,67.716)
C4: (49.282,173.734,67.332)
P: (45.605,179.716,66.136)
C4': (45.249,175.905,66.790)
C2': (46.012,173.747,67.386)
O2': (45.112,172.948,66.655)
N1: (51.367,172.414,68.112)
N2: (50.242,170.436,67.783)
N3: (49.133,172.394,67.308)
N7: (50.134,175.826,67.606)
N9: (48.341,174.661,66.955)
O5': (45.256,178.171,66.017)
O3': (43.999,174.702,68.415)
OP1: (41.550,168.932,70.541)
OP2: (42.070,168.449,73.023)
C3': (43.550,164.133,70.867)
C1': (43.437,164.336,68.537)
C5': (41.707,165.831,71.250)
O4': (42.298,164.971,69.089)
C8: (44.327,166.726,68.458)
O2': (43.369,162.140,69.474)
C6: (47.498,166.498,66.926)
C5: (46.209,166.433,67.505)
C4: (45.606,165.185,67.553)
P: (42.438,168.344,71.582)
C4': (42.164,164.617,70.490)
C2': (43.983,163.400,69.612)
C2: (47.320,164.217,66.554)
N1: (48.031,165.349,66.445)
N3: (46.112,164.026,67.088)
N6: (48.215,167.624,66.837)
N7: (45.384,167.401,68.072)
N9: (44.402,165.376,68.192)
O5': (42.722,166.832,71.185)
O3': (43.540,163.328,72.027)
OP2: (42.070,168.449,73.023)
C3': (43.550,164.133,70.867)
C1': (43.437,164.336,68.537)
C5': (41.707,165.831,71.250)
O4': (42.298,164.971,69.089)
C8: (44.327,166.726,68.458)
O2': (43.369,162.140,69.474)
C6: (47.498,166.498,66.926)
C5: (46.209,166.433,67.505)
C4: (45.606,165.185,67.553)
P: (42.438,168.344,71.582)
C4': (42.164,164.617,70.490)
C2': (43.983,163.400,69.612)
C2: (47.320,164.217,66.554)
N1: (48.031,165.349,66.445)
N3: (46.112,164.026,67.088)
N6: (48.215,167.624,66.837)
N7: (45.384,167.401,68.072)
N9: (44.402,165.376,68.192)
O5': (42.722,166.832,71.185)
O3': (43.540,163.328,72.027)
Image (generated by PyMOL):