Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.497 88.921 114.514 1.00 68.46 O
ATOM 2 P A A 575 -13.212 89.480 113.033 1.00 69.70 P
ATOM 3 OP1 A A 575 -12.623 90.839 113.158 1.00 69.45 O
ATOM 4 OP2 A A 575 -14.465 89.298 112.254 1.00 70.64 O
ATOM 5 O5' A A 575 -12.114 88.483 112.443 1.00 66.96 O
ATOM 6 C5' A A 575 -11.972 88.303 111.020 1.00 65.99 C
ATOM 7 C4' A A 575 -10.528 88.020 110.655 1.00 64.74 C
ATOM 8 O4' A A 575 -9.698 89.132 111.093 1.00 64.46 O
ATOM 9 C3' A A 575 -9.892 86.766 111.247 1.00 64.14 C
ATOM 10 O3' A A 575 -8.956 86.264 110.305 1.00 63.45 O
ATOM 11 C2' A A 575 -9.153 87.312 112.466 1.00 64.16 C
ATOM 12 O2' A A 575 -8.053 86.513 112.853 1.00 65.00 O
ATOM 13 C1' A A 575 -8.667 88.655 111.934 1.00 62.88 C
ATOM 14 N9 A A 575 -8.393 89.668 112.953 1.00 61.86 N
ATOM 15 C8 A A 575 -9.284 90.478 113.614 1.00 61.17 C
ATOM 16 N7 A A 575 -8.718 91.319 114.445 1.00 61.03 N
ATOM 17 C5 A A 575 -7.363 91.040 114.332 1.00 61.08 C
ATOM 18 C6 A A 575 -6.226 91.594 114.951 1.00 60.70 C
ATOM 19 N6 A A 575 -6.276 92.586 115.845 1.00 60.99 N
ATOM 20 N1 A A 575 -5.019 91.087 114.616 1.00 59.95 N
ATOM 21 C2 A A 575 -4.968 90.093 113.721 1.00 60.92 C
ATOM 22 N3 A A 575 -5.961 89.489 113.072 1.00 61.87 N
ATOM 23 C4 A A 575 -7.148 90.017 113.425 1.00 61.90 C
ATOM 24 P G A 576 -9.231 84.862 109.574 1.00 65.98 P
ATOM 25 OP1 G A 576 -10.696 84.625 109.617 1.00 68.24 O
ATOM 26 OP2 G A 576 -8.305 83.845 110.135 1.00 64.96 O
ATOM 27 O5' G A 576 -8.845 85.134 108.048 1.00 65.22 O
TER
ATOM 1 O3' A B 557 -2.379 94.907 117.407 1.00 55.68 O
ATOM 2 P C B 558 -3.271 94.540 118.690 1.00 57.26 P
ATOM 3 OP1 C B 558 -2.347 94.104 119.769 1.00 58.67 O
ATOM 4 OP2 C B 558 -4.367 93.634 118.251 1.00 56.23 O
ATOM 5 O5' C B 558 -3.894 95.941 119.113 1.00 55.92 O
ATOM 6 C5' C B 558 -3.042 97.046 119.433 1.00 58.59 C
ATOM 7 C4' C B 558 -3.858 98.299 119.585 1.00 62.28 C
ATOM 8 O4' C B 558 -4.613 98.512 118.363 1.00 63.39 O
ATOM 9 C3' C B 558 -4.926 98.263 120.666 1.00 64.05 C
ATOM 10 O3' C B 558 -4.397 98.546 121.956 1.00 66.66 O
ATOM 11 C2' C B 558 -5.891 99.334 120.184 1.00 64.28 C
ATOM 12 O2' C B 558 -5.404 100.640 120.423 1.00 65.01 O
ATOM 13 C1' C B 558 -5.882 99.068 118.678 1.00 63.58 C
ATOM 14 N1 C B 558 -6.927 98.115 118.252 1.00 63.21 N
ATOM 15 C2 C B 558 -8.234 98.586 118.044 1.00 63.40 C
ATOM 16 O2 C B 558 -8.483 99.791 118.240 1.00 65.15 O
ATOM 17 N3 C B 558 -9.191 97.719 117.638 1.00 61.72 N
ATOM 18 C4 C B 558 -8.889 96.435 117.443 1.00 60.98 C
ATOM 19 N4 C B 558 -9.863 95.617 117.040 1.00 60.89 N
ATOM 20 C5 C B 558 -7.574 95.929 117.653 1.00 61.59 C
ATOM 21 C6 C B 558 -6.635 96.793 118.054 1.00 61.98 C
ATOM 22 P C B 559 -4.852 97.653 123.217 1.00 68.74 P
ATOM 23 OP1 C B 559 -4.325 98.316 124.435 1.00 67.95 O
ATOM 24 OP2 C B 559 -4.512 96.228 122.949 1.00 65.58 O
ATOM 25 O5' C B 559 -6.437 97.790 123.228 1.00 69.67 O
TER
ATOM 2 P A A 575 -13.212 89.480 113.033 1.00 69.70 P
ATOM 3 OP1 A A 575 -12.623 90.839 113.158 1.00 69.45 O
ATOM 4 OP2 A A 575 -14.465 89.298 112.254 1.00 70.64 O
ATOM 5 O5' A A 575 -12.114 88.483 112.443 1.00 66.96 O
ATOM 6 C5' A A 575 -11.972 88.303 111.020 1.00 65.99 C
ATOM 7 C4' A A 575 -10.528 88.020 110.655 1.00 64.74 C
ATOM 8 O4' A A 575 -9.698 89.132 111.093 1.00 64.46 O
ATOM 9 C3' A A 575 -9.892 86.766 111.247 1.00 64.14 C
ATOM 10 O3' A A 575 -8.956 86.264 110.305 1.00 63.45 O
ATOM 11 C2' A A 575 -9.153 87.312 112.466 1.00 64.16 C
ATOM 12 O2' A A 575 -8.053 86.513 112.853 1.00 65.00 O
ATOM 13 C1' A A 575 -8.667 88.655 111.934 1.00 62.88 C
ATOM 14 N9 A A 575 -8.393 89.668 112.953 1.00 61.86 N
ATOM 15 C8 A A 575 -9.284 90.478 113.614 1.00 61.17 C
ATOM 16 N7 A A 575 -8.718 91.319 114.445 1.00 61.03 N
ATOM 17 C5 A A 575 -7.363 91.040 114.332 1.00 61.08 C
ATOM 18 C6 A A 575 -6.226 91.594 114.951 1.00 60.70 C
ATOM 19 N6 A A 575 -6.276 92.586 115.845 1.00 60.99 N
ATOM 20 N1 A A 575 -5.019 91.087 114.616 1.00 59.95 N
ATOM 21 C2 A A 575 -4.968 90.093 113.721 1.00 60.92 C
ATOM 22 N3 A A 575 -5.961 89.489 113.072 1.00 61.87 N
ATOM 23 C4 A A 575 -7.148 90.017 113.425 1.00 61.90 C
ATOM 24 P G A 576 -9.231 84.862 109.574 1.00 65.98 P
ATOM 25 OP1 G A 576 -10.696 84.625 109.617 1.00 68.24 O
ATOM 26 OP2 G A 576 -8.305 83.845 110.135 1.00 64.96 O
ATOM 27 O5' G A 576 -8.845 85.134 108.048 1.00 65.22 O
TER
ATOM 1 O3' A B 557 -2.379 94.907 117.407 1.00 55.68 O
ATOM 2 P C B 558 -3.271 94.540 118.690 1.00 57.26 P
ATOM 3 OP1 C B 558 -2.347 94.104 119.769 1.00 58.67 O
ATOM 4 OP2 C B 558 -4.367 93.634 118.251 1.00 56.23 O
ATOM 5 O5' C B 558 -3.894 95.941 119.113 1.00 55.92 O
ATOM 6 C5' C B 558 -3.042 97.046 119.433 1.00 58.59 C
ATOM 7 C4' C B 558 -3.858 98.299 119.585 1.00 62.28 C
ATOM 8 O4' C B 558 -4.613 98.512 118.363 1.00 63.39 O
ATOM 9 C3' C B 558 -4.926 98.263 120.666 1.00 64.05 C
ATOM 10 O3' C B 558 -4.397 98.546 121.956 1.00 66.66 O
ATOM 11 C2' C B 558 -5.891 99.334 120.184 1.00 64.28 C
ATOM 12 O2' C B 558 -5.404 100.640 120.423 1.00 65.01 O
ATOM 13 C1' C B 558 -5.882 99.068 118.678 1.00 63.58 C
ATOM 14 N1 C B 558 -6.927 98.115 118.252 1.00 63.21 N
ATOM 15 C2 C B 558 -8.234 98.586 118.044 1.00 63.40 C
ATOM 16 O2 C B 558 -8.483 99.791 118.240 1.00 65.15 O
ATOM 17 N3 C B 558 -9.191 97.719 117.638 1.00 61.72 N
ATOM 18 C4 C B 558 -8.889 96.435 117.443 1.00 60.98 C
ATOM 19 N4 C B 558 -9.863 95.617 117.040 1.00 60.89 N
ATOM 20 C5 C B 558 -7.574 95.929 117.653 1.00 61.59 C
ATOM 21 C6 C B 558 -6.635 96.793 118.054 1.00 61.98 C
ATOM 22 P C B 559 -4.852 97.653 123.217 1.00 68.74 P
ATOM 23 OP1 C B 559 -4.325 98.316 124.435 1.00 67.95 O
ATOM 24 OP2 C B 559 -4.512 96.228 122.949 1.00 65.58 O
ATOM 25 O5' C B 559 -6.437 97.790 123.228 1.00 69.67 O
TER
Atoms:
OP1: (-12.623,90.839,113.158)
OP2: (-14.465,89.298,112.254)
C3': (-9.892,86.766,111.247)
C1': (-8.667,88.655,111.934)
C5': (-11.972,88.303,111.020)
O4': (-9.698,89.132,111.093)
C8: (-9.284,90.478,113.614)
O2': (-8.053,86.513,112.853)
C6: (-6.226,91.594,114.951)
C5: (-7.363,91.040,114.332)
C4: (-7.148,90.017,113.425)
P: (-13.212,89.480,113.033)
C4': (-10.528,88.020,110.655)
C2': (-9.153,87.312,112.466)
C2: (-4.968,90.093,113.721)
N1: (-5.019,91.087,114.616)
N3: (-5.961,89.489,113.072)
N6: (-6.276,92.586,115.845)
N7: (-8.718,91.319,114.445)
N9: (-8.393,89.668,112.953)
O5': (-12.114,88.483,112.443)
O3': (-8.956,86.264,110.305)
OP2: (-14.465,89.298,112.254)
C3': (-9.892,86.766,111.247)
C1': (-8.667,88.655,111.934)
C5': (-11.972,88.303,111.020)
O4': (-9.698,89.132,111.093)
C8: (-9.284,90.478,113.614)
O2': (-8.053,86.513,112.853)
C6: (-6.226,91.594,114.951)
C5: (-7.363,91.040,114.332)
C4: (-7.148,90.017,113.425)
P: (-13.212,89.480,113.033)
C4': (-10.528,88.020,110.655)
C2': (-9.153,87.312,112.466)
C2: (-4.968,90.093,113.721)
N1: (-5.019,91.087,114.616)
N3: (-5.961,89.489,113.072)
N6: (-6.276,92.586,115.845)
N7: (-8.718,91.319,114.445)
N9: (-8.393,89.668,112.953)
O5': (-12.114,88.483,112.443)
O3': (-8.956,86.264,110.305)
C2: (-8.234,98.586,118.044)
OP1: (-2.347,94.104,119.769)
OP2: (-4.367,93.634,118.251)
C4: (-8.889,96.435,117.443)
O5': (-3.894,95.941,119.113)
C3': (-4.926,98.263,120.666)
C1': (-5.882,99.068,118.678)
O4': (-4.613,98.512,118.363)
C5': (-3.042,97.046,119.433)
P: (-3.271,94.540,118.690)
O2: (-8.483,99.791,118.240)
C4': (-3.858,98.299,119.585)
C2': (-5.891,99.334,120.184)
O2': (-5.404,100.640,120.423)
N1: (-6.927,98.115,118.252)
N3: (-9.191,97.719,117.638)
N4: (-9.863,95.617,117.040)
C6: (-6.635,96.793,118.054)
C5: (-7.574,95.929,117.653)
O3': (-4.397,98.546,121.956)
OP1: (-2.347,94.104,119.769)
OP2: (-4.367,93.634,118.251)
C4: (-8.889,96.435,117.443)
O5': (-3.894,95.941,119.113)
C3': (-4.926,98.263,120.666)
C1': (-5.882,99.068,118.678)
O4': (-4.613,98.512,118.363)
C5': (-3.042,97.046,119.433)
P: (-3.271,94.540,118.690)
O2: (-8.483,99.791,118.240)
C4': (-3.858,98.299,119.585)
C2': (-5.891,99.334,120.184)
O2': (-5.404,100.640,120.423)
N1: (-6.927,98.115,118.252)
N3: (-9.191,97.719,117.638)
N4: (-9.863,95.617,117.040)
C6: (-6.635,96.793,118.054)
C5: (-7.574,95.929,117.653)
O3': (-4.397,98.546,121.956)
Image (generated by PyMOL):