Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A28:A44
Extra
PDB:
ATOM 1 O3' G A 27 -4.728 10.407 -29.033 1.00 33.44 O
ATOM 2 P A A 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 3 OP1 A A 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 4 OP2 A A 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 5 O5' A A 28 -6.924 9.836 -30.058 1.00 34.61 O
ATOM 6 C5' A A 28 -7.865 9.359 -31.002 1.00 35.71 C
ATOM 7 C4' A A 28 -9.275 9.676 -30.539 1.00 37.41 C
ATOM 8 O4' A A 28 -9.586 8.905 -29.355 1.00 36.90 O
ATOM 9 C3' A A 28 -9.498 11.121 -30.126 1.00 36.63 C
ATOM 10 O3' A A 28 -9.850 11.887 -31.266 1.00 38.11 O
ATOM 11 C2' A A 28 -10.669 11.009 -29.157 1.00 35.36 C
ATOM 12 O2' A A 28 -11.919 11.026 -29.820 1.00 39.08 O
ATOM 13 C1' A A 28 -10.449 9.644 -28.511 1.00 37.54 C
ATOM 14 N9 A A 28 -9.859 9.693 -27.174 1.00 36.39 N
ATOM 15 C8 A A 28 -8.668 9.146 -26.783 1.00 36.86 C
ATOM 16 N7 A A 28 -8.388 9.336 -25.516 1.00 33.99 N
ATOM 17 C5 A A 28 -9.469 10.059 -25.040 1.00 34.57 C
ATOM 18 C6 A A 28 -9.781 10.575 -23.766 1.00 30.61 C
ATOM 19 N6 A A 28 -8.989 10.431 -22.697 1.00 28.39 N
ATOM 20 N1 A A 28 -10.942 11.248 -23.631 1.00 31.94 N
ATOM 21 C2 A A 28 -11.733 11.391 -24.699 1.00 33.41 C
ATOM 22 N3 A A 28 -11.547 10.950 -25.942 1.00 34.28 N
ATOM 23 C4 A A 28 -10.387 10.286 -26.048 1.00 35.59 C
ATOM 24 P G A 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 25 OP1 G A 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 26 OP2 G A 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 27 O5' G A 29 -10.265 14.181 -30.386 1.00 35.16 O
TER
ATOM 1 O3' A B 43 -9.604 10.806 -19.693 1.00 25.07 O
ATOM 2 P C B 44 -8.467 11.919 -19.500 1.00 29.20 P
ATOM 3 OP1 C B 44 -8.465 12.825 -20.664 1.00 25.26 O
ATOM 4 OP2 C B 44 -7.228 11.245 -19.052 1.00 23.21 O
ATOM 5 O5' C B 44 -9.061 12.802 -18.326 1.00 29.95 O
ATOM 6 C5' C B 44 -8.709 12.504 -17.029 1.00 29.15 C
ATOM 7 C4' C B 44 -9.790 13.062 -16.143 1.00 30.03 C
ATOM 8 O4' C B 44 -10.640 11.968 -15.721 1.00 25.66 O
ATOM 9 C3' C B 44 -9.203 13.674 -14.890 1.00 24.56 C
ATOM 10 O3' C B 44 -9.075 15.069 -15.109 1.00 28.00 O
ATOM 11 C2' C B 44 -10.234 13.300 -13.834 1.00 23.88 C
ATOM 12 O2' C B 44 -11.351 14.163 -13.835 1.00 26.99 O
ATOM 13 C1' C B 44 -10.643 11.909 -14.315 1.00 23.67 C
ATOM 14 N1 C B 44 -9.699 10.845 -13.885 1.00 25.45 N
ATOM 15 C2 C B 44 -9.812 10.370 -12.583 1.00 22.57 C
ATOM 16 O2 C B 44 -10.689 10.855 -11.861 1.00 24.83 O
ATOM 17 N3 C B 44 -8.962 9.409 -12.160 1.00 20.72 N
ATOM 18 C4 C B 44 -8.034 8.921 -12.986 1.00 24.30 C
ATOM 19 N4 C B 44 -7.222 7.967 -12.518 1.00 21.31 N
ATOM 20 C5 C B 44 -7.900 9.392 -14.324 1.00 24.32 C
ATOM 21 C6 C B 44 -8.746 10.347 -14.726 1.00 25.51 C
ATOM 22 P C B 45 -7.786 15.832 -14.551 1.00 25.08 P
ATOM 23 OP1 C B 45 -7.754 17.180 -15.159 1.00 27.64 O
ATOM 24 OP2 C B 45 -6.608 14.946 -14.677 1.00 24.76 O
ATOM 25 O5' C B 45 -8.131 15.969 -12.999 1.00 25.12 O
TER
ATOM 2 P A A 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 3 OP1 A A 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 4 OP2 A A 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 5 O5' A A 28 -6.924 9.836 -30.058 1.00 34.61 O
ATOM 6 C5' A A 28 -7.865 9.359 -31.002 1.00 35.71 C
ATOM 7 C4' A A 28 -9.275 9.676 -30.539 1.00 37.41 C
ATOM 8 O4' A A 28 -9.586 8.905 -29.355 1.00 36.90 O
ATOM 9 C3' A A 28 -9.498 11.121 -30.126 1.00 36.63 C
ATOM 10 O3' A A 28 -9.850 11.887 -31.266 1.00 38.11 O
ATOM 11 C2' A A 28 -10.669 11.009 -29.157 1.00 35.36 C
ATOM 12 O2' A A 28 -11.919 11.026 -29.820 1.00 39.08 O
ATOM 13 C1' A A 28 -10.449 9.644 -28.511 1.00 37.54 C
ATOM 14 N9 A A 28 -9.859 9.693 -27.174 1.00 36.39 N
ATOM 15 C8 A A 28 -8.668 9.146 -26.783 1.00 36.86 C
ATOM 16 N7 A A 28 -8.388 9.336 -25.516 1.00 33.99 N
ATOM 17 C5 A A 28 -9.469 10.059 -25.040 1.00 34.57 C
ATOM 18 C6 A A 28 -9.781 10.575 -23.766 1.00 30.61 C
ATOM 19 N6 A A 28 -8.989 10.431 -22.697 1.00 28.39 N
ATOM 20 N1 A A 28 -10.942 11.248 -23.631 1.00 31.94 N
ATOM 21 C2 A A 28 -11.733 11.391 -24.699 1.00 33.41 C
ATOM 22 N3 A A 28 -11.547 10.950 -25.942 1.00 34.28 N
ATOM 23 C4 A A 28 -10.387 10.286 -26.048 1.00 35.59 C
ATOM 24 P G A 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 25 OP1 G A 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 26 OP2 G A 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 27 O5' G A 29 -10.265 14.181 -30.386 1.00 35.16 O
TER
ATOM 1 O3' A B 43 -9.604 10.806 -19.693 1.00 25.07 O
ATOM 2 P C B 44 -8.467 11.919 -19.500 1.00 29.20 P
ATOM 3 OP1 C B 44 -8.465 12.825 -20.664 1.00 25.26 O
ATOM 4 OP2 C B 44 -7.228 11.245 -19.052 1.00 23.21 O
ATOM 5 O5' C B 44 -9.061 12.802 -18.326 1.00 29.95 O
ATOM 6 C5' C B 44 -8.709 12.504 -17.029 1.00 29.15 C
ATOM 7 C4' C B 44 -9.790 13.062 -16.143 1.00 30.03 C
ATOM 8 O4' C B 44 -10.640 11.968 -15.721 1.00 25.66 O
ATOM 9 C3' C B 44 -9.203 13.674 -14.890 1.00 24.56 C
ATOM 10 O3' C B 44 -9.075 15.069 -15.109 1.00 28.00 O
ATOM 11 C2' C B 44 -10.234 13.300 -13.834 1.00 23.88 C
ATOM 12 O2' C B 44 -11.351 14.163 -13.835 1.00 26.99 O
ATOM 13 C1' C B 44 -10.643 11.909 -14.315 1.00 23.67 C
ATOM 14 N1 C B 44 -9.699 10.845 -13.885 1.00 25.45 N
ATOM 15 C2 C B 44 -9.812 10.370 -12.583 1.00 22.57 C
ATOM 16 O2 C B 44 -10.689 10.855 -11.861 1.00 24.83 O
ATOM 17 N3 C B 44 -8.962 9.409 -12.160 1.00 20.72 N
ATOM 18 C4 C B 44 -8.034 8.921 -12.986 1.00 24.30 C
ATOM 19 N4 C B 44 -7.222 7.967 -12.518 1.00 21.31 N
ATOM 20 C5 C B 44 -7.900 9.392 -14.324 1.00 24.32 C
ATOM 21 C6 C B 44 -8.746 10.347 -14.726 1.00 25.51 C
ATOM 22 P C B 45 -7.786 15.832 -14.551 1.00 25.08 P
ATOM 23 OP1 C B 45 -7.754 17.180 -15.159 1.00 27.64 O
ATOM 24 OP2 C B 45 -6.608 14.946 -14.677 1.00 24.76 O
ATOM 25 O5' C B 45 -8.131 15.969 -12.999 1.00 25.12 O
TER
Atoms:
OP1: (-5.128,8.112,-29.922)
OP2: (-4.886,10.105,-31.510)
C3': (-9.498,11.121,-30.126)
C1': (-10.449,9.644,-28.511)
C5': (-7.865,9.359,-31.002)
O4': (-9.586,8.905,-29.355)
C8: (-8.668,9.146,-26.783)
O2': (-11.919,11.026,-29.820)
C6: (-9.781,10.575,-23.766)
C5: (-9.469,10.059,-25.040)
C4: (-10.387,10.286,-26.048)
P: (-5.361,9.543,-30.227)
C4': (-9.275,9.676,-30.539)
C2': (-10.669,11.009,-29.157)
C2: (-11.733,11.391,-24.699)
N1: (-10.942,11.248,-23.631)
N3: (-11.547,10.950,-25.942)
N6: (-8.989,10.431,-22.697)
N7: (-8.388,9.336,-25.516)
N9: (-9.859,9.693,-27.174)
O5': (-6.924,9.836,-30.058)
O3': (-9.850,11.887,-31.266)
OP2: (-4.886,10.105,-31.510)
C3': (-9.498,11.121,-30.126)
C1': (-10.449,9.644,-28.511)
C5': (-7.865,9.359,-31.002)
O4': (-9.586,8.905,-29.355)
C8: (-8.668,9.146,-26.783)
O2': (-11.919,11.026,-29.820)
C6: (-9.781,10.575,-23.766)
C5: (-9.469,10.059,-25.040)
C4: (-10.387,10.286,-26.048)
P: (-5.361,9.543,-30.227)
C4': (-9.275,9.676,-30.539)
C2': (-10.669,11.009,-29.157)
C2: (-11.733,11.391,-24.699)
N1: (-10.942,11.248,-23.631)
N3: (-11.547,10.950,-25.942)
N6: (-8.989,10.431,-22.697)
N7: (-8.388,9.336,-25.516)
N9: (-9.859,9.693,-27.174)
O5': (-6.924,9.836,-30.058)
O3': (-9.850,11.887,-31.266)
C2: (-9.812,10.370,-12.583)
OP1: (-8.465,12.825,-20.664)
OP2: (-7.228,11.245,-19.052)
C4: (-8.034,8.921,-12.986)
O5': (-9.061,12.802,-18.326)
C3': (-9.203,13.674,-14.890)
C1': (-10.643,11.909,-14.315)
O4': (-10.640,11.968,-15.721)
C5': (-8.709,12.504,-17.029)
P: (-8.467,11.919,-19.500)
O2: (-10.689,10.855,-11.861)
C4': (-9.790,13.062,-16.143)
C2': (-10.234,13.300,-13.834)
O2': (-11.351,14.163,-13.835)
N1: (-9.699,10.845,-13.885)
N3: (-8.962,9.409,-12.160)
N4: (-7.222,7.967,-12.518)
C6: (-8.746,10.347,-14.726)
C5: (-7.900,9.392,-14.324)
O3': (-9.075,15.069,-15.109)
OP1: (-8.465,12.825,-20.664)
OP2: (-7.228,11.245,-19.052)
C4: (-8.034,8.921,-12.986)
O5': (-9.061,12.802,-18.326)
C3': (-9.203,13.674,-14.890)
C1': (-10.643,11.909,-14.315)
O4': (-10.640,11.968,-15.721)
C5': (-8.709,12.504,-17.029)
P: (-8.467,11.919,-19.500)
O2: (-10.689,10.855,-11.861)
C4': (-9.790,13.062,-16.143)
C2': (-10.234,13.300,-13.834)
O2': (-11.351,14.163,-13.835)
N1: (-9.699,10.845,-13.885)
N3: (-8.962,9.409,-12.160)
N4: (-7.222,7.967,-12.518)
C6: (-8.746,10.347,-14.726)
C5: (-7.900,9.392,-14.324)
O3': (-9.075,15.069,-15.109)
Image (generated by PyMOL):