Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0345:0282
Extra
PDB:
ATOM 1 O3' C A 344 53.054 120.487 15.326 1.00 54.10 O
ATOM 2 P A A 345 54.015 120.091 14.104 1.00 55.81 P
ATOM 3 OP1 A A 345 53.159 119.695 12.958 1.00 56.44 O
ATOM 4 OP2 A A 345 55.063 119.157 14.601 1.00 55.41 O
ATOM 5 O5' A A 345 54.725 121.455 13.721 1.00 55.91 O
ATOM 6 C5' A A 345 55.851 121.468 12.841 1.00 56.98 C
ATOM 7 C4' A A 345 55.901 122.777 12.108 1.00 58.35 C
ATOM 8 O4' A A 345 54.843 122.806 11.110 1.00 59.17 O
ATOM 9 C3' A A 345 55.695 124.005 12.989 1.00 58.75 C
ATOM 10 O3' A A 345 56.497 125.069 12.501 1.00 59.27 O
ATOM 11 C2' A A 345 54.212 124.309 12.793 1.00 59.29 C
ATOM 12 O2' A A 345 53.888 125.667 13.010 1.00 60.38 O
ATOM 13 C1' A A 345 54.021 123.934 11.325 1.00 59.42 C
ATOM 14 N9 A A 345 52.647 123.589 10.957 1.00 59.66 N
ATOM 15 C8 A A 345 51.898 122.509 11.362 1.00 60.03 C
ATOM 16 N7 A A 345 50.689 122.483 10.853 1.00 60.15 N
ATOM 17 C5 A A 345 50.634 123.621 10.059 1.00 59.95 C
ATOM 18 C6 A A 345 49.616 124.169 9.250 1.00 59.06 C
ATOM 19 N6 A A 345 48.407 123.626 9.107 1.00 57.94 N
ATOM 20 N1 A A 345 49.890 125.313 8.586 1.00 59.49 N
ATOM 21 C2 A A 345 51.103 125.866 8.731 1.00 60.24 C
ATOM 22 N3 A A 345 52.138 125.451 9.462 1.00 60.42 N
ATOM 23 C4 A A 345 51.835 124.311 10.110 1.00 60.28 C
ATOM 24 P G A 346 57.909 125.384 13.198 1.00 58.76 P
ATOM 25 OP1 G A 346 58.315 124.213 14.014 1.00 59.07 O
ATOM 26 OP2 G A 346 57.802 126.717 13.830 1.00 58.89 O
ATOM 27 O5' G A 346 58.919 125.474 11.971 1.00 60.24 O
TER
ATOM 1 O3' A B 281 46.223 126.269 5.612 1.00 66.22 O
ATOM 2 P C B 282 45.219 125.961 6.831 1.00 66.45 P
ATOM 3 OP1 C B 282 44.308 127.122 6.991 1.00 65.63 O
ATOM 4 OP2 C B 282 46.034 125.501 7.985 1.00 67.29 O
ATOM 5 O5' C B 282 44.348 124.730 6.321 1.00 66.20 O
ATOM 6 C5' C B 282 43.498 124.853 5.169 1.00 66.62 C
ATOM 7 C4' C B 282 42.790 123.550 4.911 1.00 67.17 C
ATOM 8 O4' C B 282 43.782 122.511 4.717 1.00 67.52 O
ATOM 9 C3' C B 282 41.942 123.045 6.064 1.00 67.76 C
ATOM 10 O3' C B 282 40.645 123.617 6.045 1.00 69.16 O
ATOM 11 C2' C B 282 41.900 121.549 5.808 1.00 68.01 C
ATOM 12 O2' C B 282 40.953 121.204 4.820 1.00 67.94 O
ATOM 13 C1' C B 282 43.318 121.299 5.288 1.00 68.57 C
ATOM 14 N1 C B 282 44.252 120.900 6.354 1.00 69.33 N
ATOM 15 C2 C B 282 44.283 119.559 6.755 1.00 69.60 C
ATOM 16 O2 C B 282 43.547 118.743 6.182 1.00 69.93 O
ATOM 17 N3 C B 282 45.117 119.188 7.752 1.00 69.83 N
ATOM 18 C4 C B 282 45.906 120.094 8.335 1.00 69.59 C
ATOM 19 N4 C B 282 46.713 119.683 9.313 1.00 68.39 N
ATOM 20 C5 C B 282 45.903 121.462 7.938 1.00 69.91 C
ATOM 21 C6 C B 282 45.071 121.818 6.954 1.00 69.39 C
ATOM 22 P C B 283 39.993 124.140 7.414 1.00 70.32 P
ATOM 23 OP1 C B 283 38.581 124.521 7.140 1.00 70.54 O
ATOM 24 OP2 C B 283 40.926 125.144 7.984 1.00 71.40 O
ATOM 25 O5' C B 283 39.988 122.853 8.354 1.00 68.56 O
TER
ATOM 2 P A A 345 54.015 120.091 14.104 1.00 55.81 P
ATOM 3 OP1 A A 345 53.159 119.695 12.958 1.00 56.44 O
ATOM 4 OP2 A A 345 55.063 119.157 14.601 1.00 55.41 O
ATOM 5 O5' A A 345 54.725 121.455 13.721 1.00 55.91 O
ATOM 6 C5' A A 345 55.851 121.468 12.841 1.00 56.98 C
ATOM 7 C4' A A 345 55.901 122.777 12.108 1.00 58.35 C
ATOM 8 O4' A A 345 54.843 122.806 11.110 1.00 59.17 O
ATOM 9 C3' A A 345 55.695 124.005 12.989 1.00 58.75 C
ATOM 10 O3' A A 345 56.497 125.069 12.501 1.00 59.27 O
ATOM 11 C2' A A 345 54.212 124.309 12.793 1.00 59.29 C
ATOM 12 O2' A A 345 53.888 125.667 13.010 1.00 60.38 O
ATOM 13 C1' A A 345 54.021 123.934 11.325 1.00 59.42 C
ATOM 14 N9 A A 345 52.647 123.589 10.957 1.00 59.66 N
ATOM 15 C8 A A 345 51.898 122.509 11.362 1.00 60.03 C
ATOM 16 N7 A A 345 50.689 122.483 10.853 1.00 60.15 N
ATOM 17 C5 A A 345 50.634 123.621 10.059 1.00 59.95 C
ATOM 18 C6 A A 345 49.616 124.169 9.250 1.00 59.06 C
ATOM 19 N6 A A 345 48.407 123.626 9.107 1.00 57.94 N
ATOM 20 N1 A A 345 49.890 125.313 8.586 1.00 59.49 N
ATOM 21 C2 A A 345 51.103 125.866 8.731 1.00 60.24 C
ATOM 22 N3 A A 345 52.138 125.451 9.462 1.00 60.42 N
ATOM 23 C4 A A 345 51.835 124.311 10.110 1.00 60.28 C
ATOM 24 P G A 346 57.909 125.384 13.198 1.00 58.76 P
ATOM 25 OP1 G A 346 58.315 124.213 14.014 1.00 59.07 O
ATOM 26 OP2 G A 346 57.802 126.717 13.830 1.00 58.89 O
ATOM 27 O5' G A 346 58.919 125.474 11.971 1.00 60.24 O
TER
ATOM 1 O3' A B 281 46.223 126.269 5.612 1.00 66.22 O
ATOM 2 P C B 282 45.219 125.961 6.831 1.00 66.45 P
ATOM 3 OP1 C B 282 44.308 127.122 6.991 1.00 65.63 O
ATOM 4 OP2 C B 282 46.034 125.501 7.985 1.00 67.29 O
ATOM 5 O5' C B 282 44.348 124.730 6.321 1.00 66.20 O
ATOM 6 C5' C B 282 43.498 124.853 5.169 1.00 66.62 C
ATOM 7 C4' C B 282 42.790 123.550 4.911 1.00 67.17 C
ATOM 8 O4' C B 282 43.782 122.511 4.717 1.00 67.52 O
ATOM 9 C3' C B 282 41.942 123.045 6.064 1.00 67.76 C
ATOM 10 O3' C B 282 40.645 123.617 6.045 1.00 69.16 O
ATOM 11 C2' C B 282 41.900 121.549 5.808 1.00 68.01 C
ATOM 12 O2' C B 282 40.953 121.204 4.820 1.00 67.94 O
ATOM 13 C1' C B 282 43.318 121.299 5.288 1.00 68.57 C
ATOM 14 N1 C B 282 44.252 120.900 6.354 1.00 69.33 N
ATOM 15 C2 C B 282 44.283 119.559 6.755 1.00 69.60 C
ATOM 16 O2 C B 282 43.547 118.743 6.182 1.00 69.93 O
ATOM 17 N3 C B 282 45.117 119.188 7.752 1.00 69.83 N
ATOM 18 C4 C B 282 45.906 120.094 8.335 1.00 69.59 C
ATOM 19 N4 C B 282 46.713 119.683 9.313 1.00 68.39 N
ATOM 20 C5 C B 282 45.903 121.462 7.938 1.00 69.91 C
ATOM 21 C6 C B 282 45.071 121.818 6.954 1.00 69.39 C
ATOM 22 P C B 283 39.993 124.140 7.414 1.00 70.32 P
ATOM 23 OP1 C B 283 38.581 124.521 7.140 1.00 70.54 O
ATOM 24 OP2 C B 283 40.926 125.144 7.984 1.00 71.40 O
ATOM 25 O5' C B 283 39.988 122.853 8.354 1.00 68.56 O
TER
Atoms:
OP1: (53.159,119.695,12.958)
OP2: (55.063,119.157,14.601)
C3': (55.695,124.005,12.989)
C1': (54.021,123.934,11.325)
C5': (55.851,121.468,12.841)
O4': (54.843,122.806,11.110)
C8: (51.898,122.509,11.362)
O2': (53.888,125.667,13.010)
C6: (49.616,124.169,9.250)
C5: (50.634,123.621,10.059)
C4: (51.835,124.311,10.110)
P: (54.015,120.091,14.104)
C4': (55.901,122.777,12.108)
C2': (54.212,124.309,12.793)
C2: (51.103,125.866,8.731)
N1: (49.890,125.313,8.586)
N3: (52.138,125.451,9.462)
N6: (48.407,123.626,9.107)
N7: (50.689,122.483,10.853)
N9: (52.647,123.589,10.957)
O5': (54.725,121.455,13.721)
O3': (56.497,125.069,12.501)
OP2: (55.063,119.157,14.601)
C3': (55.695,124.005,12.989)
C1': (54.021,123.934,11.325)
C5': (55.851,121.468,12.841)
O4': (54.843,122.806,11.110)
C8: (51.898,122.509,11.362)
O2': (53.888,125.667,13.010)
C6: (49.616,124.169,9.250)
C5: (50.634,123.621,10.059)
C4: (51.835,124.311,10.110)
P: (54.015,120.091,14.104)
C4': (55.901,122.777,12.108)
C2': (54.212,124.309,12.793)
C2: (51.103,125.866,8.731)
N1: (49.890,125.313,8.586)
N3: (52.138,125.451,9.462)
N6: (48.407,123.626,9.107)
N7: (50.689,122.483,10.853)
N9: (52.647,123.589,10.957)
O5': (54.725,121.455,13.721)
O3': (56.497,125.069,12.501)
C2: (44.283,119.559,6.755)
OP1: (44.308,127.122,6.991)
OP2: (46.034,125.501,7.985)
C4: (45.906,120.094,8.335)
O5': (44.348,124.730,6.321)
C3': (41.942,123.045,6.064)
C1': (43.318,121.299,5.288)
O4': (43.782,122.511,4.717)
C5': (43.498,124.853,5.169)
P: (45.219,125.961,6.831)
O2: (43.547,118.743,6.182)
C4': (42.790,123.550,4.911)
C2': (41.900,121.549,5.808)
O2': (40.953,121.204,4.820)
N1: (44.252,120.900,6.354)
N3: (45.117,119.188,7.752)
N4: (46.713,119.683,9.313)
C6: (45.071,121.818,6.954)
C5: (45.903,121.462,7.938)
O3': (40.645,123.617,6.045)
OP1: (44.308,127.122,6.991)
OP2: (46.034,125.501,7.985)
C4: (45.906,120.094,8.335)
O5': (44.348,124.730,6.321)
C3': (41.942,123.045,6.064)
C1': (43.318,121.299,5.288)
O4': (43.782,122.511,4.717)
C5': (43.498,124.853,5.169)
P: (45.219,125.961,6.831)
O2: (43.547,118.743,6.182)
C4': (42.790,123.550,4.911)
C2': (41.900,121.549,5.808)
O2': (40.953,121.204,4.820)
N1: (44.252,120.900,6.354)
N3: (45.117,119.188,7.752)
N4: (46.713,119.683,9.313)
C6: (45.071,121.818,6.954)
C5: (45.903,121.462,7.938)
O3': (40.645,123.617,6.045)
Image (generated by PyMOL):