Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0345:0282
Extra
PDB:
ATOM 1 O3' C A 344 53.205 119.913 15.337 1.00 48.26 O
ATOM 2 P A A 345 54.193 119.566 14.113 1.00 51.46 P
ATOM 3 OP1 A A 345 53.370 119.332 12.896 1.00 50.26 O
ATOM 4 OP2 A A 345 55.156 118.523 14.563 1.00 50.29 O
ATOM 5 O5' A A 345 55.007 120.911 13.879 1.00 51.44 O
ATOM 6 C5' A A 345 56.142 120.941 13.003 1.00 52.62 C
ATOM 7 C4' A A 345 56.159 122.230 12.221 1.00 53.82 C
ATOM 8 O4' A A 345 55.109 122.202 11.212 1.00 55.25 O
ATOM 9 C3' A A 345 55.938 123.501 13.036 1.00 54.59 C
ATOM 10 O3' A A 345 56.742 124.537 12.502 1.00 55.75 O
ATOM 11 C2' A A 345 54.461 123.803 12.786 1.00 55.91 C
ATOM 12 O2' A A 345 54.122 125.170 12.923 1.00 54.63 O
ATOM 13 C1' A A 345 54.306 123.357 11.334 1.00 55.63 C
ATOM 14 N9 A A 345 52.928 123.031 10.948 1.00 56.77 N
ATOM 15 C8 A A 345 52.163 121.954 11.328 1.00 57.22 C
ATOM 16 N7 A A 345 50.948 121.967 10.830 1.00 57.72 N
ATOM 17 C5 A A 345 50.910 123.126 10.067 1.00 57.19 C
ATOM 18 C6 A A 345 49.895 123.718 9.286 1.00 57.06 C
ATOM 19 N6 A A 345 48.670 123.206 9.147 1.00 55.77 N
ATOM 20 N1 A A 345 50.185 124.873 8.648 1.00 57.23 N
ATOM 21 C2 A A 345 51.411 125.392 8.791 1.00 57.91 C
ATOM 22 N3 A A 345 52.446 124.936 9.498 1.00 57.99 N
ATOM 23 C4 A A 345 52.126 123.786 10.121 1.00 57.31 C
ATOM 24 P G A 346 58.089 124.976 13.261 1.00 56.43 P
ATOM 25 OP1 G A 346 58.520 123.877 14.159 1.00 57.57 O
ATOM 26 OP2 G A 346 57.863 126.331 13.814 1.00 56.04 O
ATOM 27 O5' G A 346 59.156 125.070 12.084 1.00 58.39 O
TER
ATOM 1 O3' A B 281 46.278 125.716 5.598 1.00 58.99 O
ATOM 2 P C B 282 45.356 125.487 6.897 1.00 60.78 P
ATOM 3 OP1 C B 282 44.504 126.696 7.054 1.00 59.42 O
ATOM 4 OP2 C B 282 46.231 125.055 8.022 1.00 60.51 O
ATOM 5 O5' C B 282 44.419 124.259 6.501 1.00 58.95 O
ATOM 6 C5' C B 282 43.609 124.301 5.309 1.00 59.80 C
ATOM 7 C4' C B 282 42.954 122.962 5.071 1.00 60.57 C
ATOM 8 O4' C B 282 43.975 121.943 4.905 1.00 61.12 O
ATOM 9 C3' C B 282 42.095 122.445 6.210 1.00 62.04 C
ATOM 10 O3' C B 282 40.788 123.004 6.163 1.00 63.94 O
ATOM 11 C2' C B 282 42.090 120.943 5.959 1.00 62.14 C
ATOM 12 O2' C B 282 41.176 120.552 4.955 1.00 64.61 O
ATOM 13 C1' C B 282 43.520 120.718 5.458 1.00 61.46 C
ATOM 14 N1 C B 282 44.444 120.307 6.532 1.00 61.32 N
ATOM 15 C2 C B 282 44.450 118.964 6.939 1.00 61.68 C
ATOM 16 O2 C B 282 43.718 118.151 6.352 1.00 62.46 O
ATOM 17 N3 C B 282 45.259 118.587 7.955 1.00 61.01 N
ATOM 18 C4 C B 282 46.055 119.482 8.543 1.00 59.31 C
ATOM 19 N4 C B 282 46.832 119.062 9.539 1.00 57.54 N
ATOM 20 C5 C B 282 46.087 120.847 8.135 1.00 59.26 C
ATOM 21 C6 C B 282 45.273 121.213 7.137 1.00 60.33 C
ATOM 22 P C B 283 40.097 123.530 7.515 1.00 65.37 P
ATOM 23 OP1 C B 283 38.692 123.893 7.184 1.00 65.79 O
ATOM 24 OP2 C B 283 40.991 124.550 8.124 1.00 65.30 O
ATOM 25 O5' C B 283 40.075 122.242 8.455 1.00 65.69 O
TER
ATOM 2 P A A 345 54.193 119.566 14.113 1.00 51.46 P
ATOM 3 OP1 A A 345 53.370 119.332 12.896 1.00 50.26 O
ATOM 4 OP2 A A 345 55.156 118.523 14.563 1.00 50.29 O
ATOM 5 O5' A A 345 55.007 120.911 13.879 1.00 51.44 O
ATOM 6 C5' A A 345 56.142 120.941 13.003 1.00 52.62 C
ATOM 7 C4' A A 345 56.159 122.230 12.221 1.00 53.82 C
ATOM 8 O4' A A 345 55.109 122.202 11.212 1.00 55.25 O
ATOM 9 C3' A A 345 55.938 123.501 13.036 1.00 54.59 C
ATOM 10 O3' A A 345 56.742 124.537 12.502 1.00 55.75 O
ATOM 11 C2' A A 345 54.461 123.803 12.786 1.00 55.91 C
ATOM 12 O2' A A 345 54.122 125.170 12.923 1.00 54.63 O
ATOM 13 C1' A A 345 54.306 123.357 11.334 1.00 55.63 C
ATOM 14 N9 A A 345 52.928 123.031 10.948 1.00 56.77 N
ATOM 15 C8 A A 345 52.163 121.954 11.328 1.00 57.22 C
ATOM 16 N7 A A 345 50.948 121.967 10.830 1.00 57.72 N
ATOM 17 C5 A A 345 50.910 123.126 10.067 1.00 57.19 C
ATOM 18 C6 A A 345 49.895 123.718 9.286 1.00 57.06 C
ATOM 19 N6 A A 345 48.670 123.206 9.147 1.00 55.77 N
ATOM 20 N1 A A 345 50.185 124.873 8.648 1.00 57.23 N
ATOM 21 C2 A A 345 51.411 125.392 8.791 1.00 57.91 C
ATOM 22 N3 A A 345 52.446 124.936 9.498 1.00 57.99 N
ATOM 23 C4 A A 345 52.126 123.786 10.121 1.00 57.31 C
ATOM 24 P G A 346 58.089 124.976 13.261 1.00 56.43 P
ATOM 25 OP1 G A 346 58.520 123.877 14.159 1.00 57.57 O
ATOM 26 OP2 G A 346 57.863 126.331 13.814 1.00 56.04 O
ATOM 27 O5' G A 346 59.156 125.070 12.084 1.00 58.39 O
TER
ATOM 1 O3' A B 281 46.278 125.716 5.598 1.00 58.99 O
ATOM 2 P C B 282 45.356 125.487 6.897 1.00 60.78 P
ATOM 3 OP1 C B 282 44.504 126.696 7.054 1.00 59.42 O
ATOM 4 OP2 C B 282 46.231 125.055 8.022 1.00 60.51 O
ATOM 5 O5' C B 282 44.419 124.259 6.501 1.00 58.95 O
ATOM 6 C5' C B 282 43.609 124.301 5.309 1.00 59.80 C
ATOM 7 C4' C B 282 42.954 122.962 5.071 1.00 60.57 C
ATOM 8 O4' C B 282 43.975 121.943 4.905 1.00 61.12 O
ATOM 9 C3' C B 282 42.095 122.445 6.210 1.00 62.04 C
ATOM 10 O3' C B 282 40.788 123.004 6.163 1.00 63.94 O
ATOM 11 C2' C B 282 42.090 120.943 5.959 1.00 62.14 C
ATOM 12 O2' C B 282 41.176 120.552 4.955 1.00 64.61 O
ATOM 13 C1' C B 282 43.520 120.718 5.458 1.00 61.46 C
ATOM 14 N1 C B 282 44.444 120.307 6.532 1.00 61.32 N
ATOM 15 C2 C B 282 44.450 118.964 6.939 1.00 61.68 C
ATOM 16 O2 C B 282 43.718 118.151 6.352 1.00 62.46 O
ATOM 17 N3 C B 282 45.259 118.587 7.955 1.00 61.01 N
ATOM 18 C4 C B 282 46.055 119.482 8.543 1.00 59.31 C
ATOM 19 N4 C B 282 46.832 119.062 9.539 1.00 57.54 N
ATOM 20 C5 C B 282 46.087 120.847 8.135 1.00 59.26 C
ATOM 21 C6 C B 282 45.273 121.213 7.137 1.00 60.33 C
ATOM 22 P C B 283 40.097 123.530 7.515 1.00 65.37 P
ATOM 23 OP1 C B 283 38.692 123.893 7.184 1.00 65.79 O
ATOM 24 OP2 C B 283 40.991 124.550 8.124 1.00 65.30 O
ATOM 25 O5' C B 283 40.075 122.242 8.455 1.00 65.69 O
TER
Atoms:
OP1: (53.370,119.332,12.896)
OP2: (55.156,118.523,14.563)
C3': (55.938,123.501,13.036)
C1': (54.306,123.357,11.334)
C5': (56.142,120.941,13.003)
O4': (55.109,122.202,11.212)
C8: (52.163,121.954,11.328)
O2': (54.122,125.170,12.923)
C6: (49.895,123.718,9.286)
C5: (50.910,123.126,10.067)
C4: (52.126,123.786,10.121)
P: (54.193,119.566,14.113)
C4': (56.159,122.230,12.221)
C2': (54.461,123.803,12.786)
C2: (51.411,125.392,8.791)
N1: (50.185,124.873,8.648)
N3: (52.446,124.936,9.498)
N6: (48.670,123.206,9.147)
N7: (50.948,121.967,10.830)
N9: (52.928,123.031,10.948)
O5': (55.007,120.911,13.879)
O3': (56.742,124.537,12.502)
OP2: (55.156,118.523,14.563)
C3': (55.938,123.501,13.036)
C1': (54.306,123.357,11.334)
C5': (56.142,120.941,13.003)
O4': (55.109,122.202,11.212)
C8: (52.163,121.954,11.328)
O2': (54.122,125.170,12.923)
C6: (49.895,123.718,9.286)
C5: (50.910,123.126,10.067)
C4: (52.126,123.786,10.121)
P: (54.193,119.566,14.113)
C4': (56.159,122.230,12.221)
C2': (54.461,123.803,12.786)
C2: (51.411,125.392,8.791)
N1: (50.185,124.873,8.648)
N3: (52.446,124.936,9.498)
N6: (48.670,123.206,9.147)
N7: (50.948,121.967,10.830)
N9: (52.928,123.031,10.948)
O5': (55.007,120.911,13.879)
O3': (56.742,124.537,12.502)
C2: (44.450,118.964,6.939)
OP1: (44.504,126.696,7.054)
OP2: (46.231,125.055,8.022)
C4: (46.055,119.482,8.543)
O5': (44.419,124.259,6.501)
C3': (42.095,122.445,6.210)
C1': (43.520,120.718,5.458)
O4': (43.975,121.943,4.905)
C5': (43.609,124.301,5.309)
P: (45.356,125.487,6.897)
O2: (43.718,118.151,6.352)
C4': (42.954,122.962,5.071)
C2': (42.090,120.943,5.959)
O2': (41.176,120.552,4.955)
N1: (44.444,120.307,6.532)
N3: (45.259,118.587,7.955)
N4: (46.832,119.062,9.539)
C6: (45.273,121.213,7.137)
C5: (46.087,120.847,8.135)
O3': (40.788,123.004,6.163)
OP1: (44.504,126.696,7.054)
OP2: (46.231,125.055,8.022)
C4: (46.055,119.482,8.543)
O5': (44.419,124.259,6.501)
C3': (42.095,122.445,6.210)
C1': (43.520,120.718,5.458)
O4': (43.975,121.943,4.905)
C5': (43.609,124.301,5.309)
P: (45.356,125.487,6.897)
O2: (43.718,118.151,6.352)
C4': (42.954,122.962,5.071)
C2': (42.090,120.943,5.959)
O2': (41.176,120.552,4.955)
N1: (44.444,120.307,6.532)
N3: (45.259,118.587,7.955)
N4: (46.832,119.062,9.539)
C6: (45.273,121.213,7.137)
C5: (46.087,120.847,8.135)
O3': (40.788,123.004,6.163)
Image (generated by PyMOL):