Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.785 90.283 114.762 1.00 82.88 O
ATOM 2 P A A 575 -13.570 90.764 113.245 1.00 83.08 P
ATOM 3 OP1 A A 575 -12.868 92.076 113.264 1.00 82.42 O
ATOM 4 OP2 A A 575 -14.884 90.652 112.564 1.00 84.57 O
ATOM 5 O5' A A 575 -12.611 89.657 112.618 1.00 80.62 O
ATOM 6 C5' A A 575 -12.467 89.555 111.199 1.00 79.99 C
ATOM 7 C4' A A 575 -11.023 89.315 110.819 1.00 79.44 C
ATOM 8 O4' A A 575 -10.192 90.426 111.261 1.00 79.08 O
ATOM 9 C3' A A 575 -10.366 88.052 111.359 1.00 78.66 C
ATOM 10 O3' A A 575 -9.515 87.547 110.352 1.00 78.31 O
ATOM 11 C2' A A 575 -9.535 88.570 112.528 1.00 78.55 C
ATOM 12 O2' A A 575 -8.394 87.779 112.795 1.00 78.44 O
ATOM 13 C1' A A 575 -9.095 89.927 111.998 1.00 78.08 C
ATOM 14 N9 A A 575 -8.736 90.887 113.042 1.00 76.99 N
ATOM 15 C8 A A 575 -9.548 91.730 113.766 1.00 76.37 C
ATOM 16 N7 A A 575 -8.896 92.496 114.609 1.00 76.46 N
ATOM 17 C5 A A 575 -7.565 92.126 114.434 1.00 76.68 C
ATOM 18 C6 A A 575 -6.367 92.570 115.029 1.00 75.94 C
ATOM 19 N6 A A 575 -6.308 93.533 115.954 1.00 75.78 N
ATOM 20 N1 A A 575 -5.216 91.985 114.633 1.00 75.17 N
ATOM 21 C2 A A 575 -5.270 91.027 113.702 1.00 74.63 C
ATOM 22 N3 A A 575 -6.323 90.529 113.068 1.00 75.39 N
ATOM 23 C4 A A 575 -7.456 91.128 113.483 1.00 76.49 C
ATOM 24 P G A 576 -9.843 86.128 109.686 1.00 80.42 P
ATOM 25 OP1 G A 576 -11.317 86.047 109.557 1.00 81.65 O
ATOM 26 OP2 G A 576 -9.108 85.082 110.449 1.00 79.84 O
ATOM 27 O5' G A 576 -9.231 86.245 108.219 1.00 81.92 O
TER
ATOM 1 O3' A B 557 -2.530 95.487 117.229 1.00 71.42 O
ATOM 2 P C B 558 -3.459 95.203 118.510 1.00 73.01 P
ATOM 3 OP1 C B 558 -2.582 94.771 119.630 1.00 74.50 O
ATOM 4 OP2 C B 558 -4.578 94.326 118.077 1.00 73.30 O
ATOM 5 O5' C B 558 -4.014 96.646 118.883 1.00 71.59 O
ATOM 6 C5' C B 558 -3.099 97.700 119.209 1.00 72.99 C
ATOM 7 C4' C B 558 -3.842 98.985 119.437 1.00 74.63 C
ATOM 8 O4' C B 558 -4.616 99.296 118.251 1.00 75.75 O
ATOM 9 C3' C B 558 -4.877 98.951 120.543 1.00 75.60 C
ATOM 10 O3' C B 558 -4.289 99.128 121.819 1.00 79.03 O
ATOM 11 C2' C B 558 -5.791 100.097 120.145 1.00 74.79 C
ATOM 12 O2' C B 558 -5.223 101.361 120.428 1.00 72.91 O
ATOM 13 C1' C B 558 -5.843 99.903 118.629 1.00 74.31 C
ATOM 14 N1 C B 558 -6.945 99.023 118.190 1.00 73.68 N
ATOM 15 C2 C B 558 -8.249 99.540 118.134 1.00 74.10 C
ATOM 16 O2 C B 558 -8.450 100.723 118.471 1.00 75.60 O
ATOM 17 N3 C B 558 -9.258 98.738 117.717 1.00 73.09 N
ATOM 18 C4 C B 558 -9.006 97.474 117.371 1.00 72.00 C
ATOM 19 N4 C B 558 -10.026 96.724 116.960 1.00 71.41 N
ATOM 20 C5 C B 558 -7.694 96.922 117.429 1.00 72.58 C
ATOM 21 C6 C B 558 -6.705 97.722 117.839 1.00 72.64 C
ATOM 22 P C B 559 -4.727 98.165 123.028 1.00 81.76 P
ATOM 23 OP1 C B 559 -3.969 98.593 124.232 1.00 82.03 O
ATOM 24 OP2 C B 559 -4.635 96.753 122.562 1.00 80.33 O
ATOM 25 O5' C B 559 -6.264 98.518 123.256 1.00 82.94 O
TER
ATOM 2 P A A 575 -13.570 90.764 113.245 1.00 83.08 P
ATOM 3 OP1 A A 575 -12.868 92.076 113.264 1.00 82.42 O
ATOM 4 OP2 A A 575 -14.884 90.652 112.564 1.00 84.57 O
ATOM 5 O5' A A 575 -12.611 89.657 112.618 1.00 80.62 O
ATOM 6 C5' A A 575 -12.467 89.555 111.199 1.00 79.99 C
ATOM 7 C4' A A 575 -11.023 89.315 110.819 1.00 79.44 C
ATOM 8 O4' A A 575 -10.192 90.426 111.261 1.00 79.08 O
ATOM 9 C3' A A 575 -10.366 88.052 111.359 1.00 78.66 C
ATOM 10 O3' A A 575 -9.515 87.547 110.352 1.00 78.31 O
ATOM 11 C2' A A 575 -9.535 88.570 112.528 1.00 78.55 C
ATOM 12 O2' A A 575 -8.394 87.779 112.795 1.00 78.44 O
ATOM 13 C1' A A 575 -9.095 89.927 111.998 1.00 78.08 C
ATOM 14 N9 A A 575 -8.736 90.887 113.042 1.00 76.99 N
ATOM 15 C8 A A 575 -9.548 91.730 113.766 1.00 76.37 C
ATOM 16 N7 A A 575 -8.896 92.496 114.609 1.00 76.46 N
ATOM 17 C5 A A 575 -7.565 92.126 114.434 1.00 76.68 C
ATOM 18 C6 A A 575 -6.367 92.570 115.029 1.00 75.94 C
ATOM 19 N6 A A 575 -6.308 93.533 115.954 1.00 75.78 N
ATOM 20 N1 A A 575 -5.216 91.985 114.633 1.00 75.17 N
ATOM 21 C2 A A 575 -5.270 91.027 113.702 1.00 74.63 C
ATOM 22 N3 A A 575 -6.323 90.529 113.068 1.00 75.39 N
ATOM 23 C4 A A 575 -7.456 91.128 113.483 1.00 76.49 C
ATOM 24 P G A 576 -9.843 86.128 109.686 1.00 80.42 P
ATOM 25 OP1 G A 576 -11.317 86.047 109.557 1.00 81.65 O
ATOM 26 OP2 G A 576 -9.108 85.082 110.449 1.00 79.84 O
ATOM 27 O5' G A 576 -9.231 86.245 108.219 1.00 81.92 O
TER
ATOM 1 O3' A B 557 -2.530 95.487 117.229 1.00 71.42 O
ATOM 2 P C B 558 -3.459 95.203 118.510 1.00 73.01 P
ATOM 3 OP1 C B 558 -2.582 94.771 119.630 1.00 74.50 O
ATOM 4 OP2 C B 558 -4.578 94.326 118.077 1.00 73.30 O
ATOM 5 O5' C B 558 -4.014 96.646 118.883 1.00 71.59 O
ATOM 6 C5' C B 558 -3.099 97.700 119.209 1.00 72.99 C
ATOM 7 C4' C B 558 -3.842 98.985 119.437 1.00 74.63 C
ATOM 8 O4' C B 558 -4.616 99.296 118.251 1.00 75.75 O
ATOM 9 C3' C B 558 -4.877 98.951 120.543 1.00 75.60 C
ATOM 10 O3' C B 558 -4.289 99.128 121.819 1.00 79.03 O
ATOM 11 C2' C B 558 -5.791 100.097 120.145 1.00 74.79 C
ATOM 12 O2' C B 558 -5.223 101.361 120.428 1.00 72.91 O
ATOM 13 C1' C B 558 -5.843 99.903 118.629 1.00 74.31 C
ATOM 14 N1 C B 558 -6.945 99.023 118.190 1.00 73.68 N
ATOM 15 C2 C B 558 -8.249 99.540 118.134 1.00 74.10 C
ATOM 16 O2 C B 558 -8.450 100.723 118.471 1.00 75.60 O
ATOM 17 N3 C B 558 -9.258 98.738 117.717 1.00 73.09 N
ATOM 18 C4 C B 558 -9.006 97.474 117.371 1.00 72.00 C
ATOM 19 N4 C B 558 -10.026 96.724 116.960 1.00 71.41 N
ATOM 20 C5 C B 558 -7.694 96.922 117.429 1.00 72.58 C
ATOM 21 C6 C B 558 -6.705 97.722 117.839 1.00 72.64 C
ATOM 22 P C B 559 -4.727 98.165 123.028 1.00 81.76 P
ATOM 23 OP1 C B 559 -3.969 98.593 124.232 1.00 82.03 O
ATOM 24 OP2 C B 559 -4.635 96.753 122.562 1.00 80.33 O
ATOM 25 O5' C B 559 -6.264 98.518 123.256 1.00 82.94 O
TER
Atoms:
OP1: (-12.868,92.076,113.264)
OP2: (-14.884,90.652,112.564)
C3': (-10.366,88.052,111.359)
C1': (-9.095,89.927,111.998)
C5': (-12.467,89.555,111.199)
O4': (-10.192,90.426,111.261)
C8: (-9.548,91.730,113.766)
O2': (-8.394,87.779,112.795)
C6: (-6.367,92.570,115.029)
C5: (-7.565,92.126,114.434)
C4: (-7.456,91.128,113.483)
P: (-13.570,90.764,113.245)
C4': (-11.023,89.315,110.819)
C2': (-9.535,88.570,112.528)
C2: (-5.270,91.027,113.702)
N1: (-5.216,91.985,114.633)
N3: (-6.323,90.529,113.068)
N6: (-6.308,93.533,115.954)
N7: (-8.896,92.496,114.609)
N9: (-8.736,90.887,113.042)
O5': (-12.611,89.657,112.618)
O3': (-9.515,87.547,110.352)
OP2: (-14.884,90.652,112.564)
C3': (-10.366,88.052,111.359)
C1': (-9.095,89.927,111.998)
C5': (-12.467,89.555,111.199)
O4': (-10.192,90.426,111.261)
C8: (-9.548,91.730,113.766)
O2': (-8.394,87.779,112.795)
C6: (-6.367,92.570,115.029)
C5: (-7.565,92.126,114.434)
C4: (-7.456,91.128,113.483)
P: (-13.570,90.764,113.245)
C4': (-11.023,89.315,110.819)
C2': (-9.535,88.570,112.528)
C2: (-5.270,91.027,113.702)
N1: (-5.216,91.985,114.633)
N3: (-6.323,90.529,113.068)
N6: (-6.308,93.533,115.954)
N7: (-8.896,92.496,114.609)
N9: (-8.736,90.887,113.042)
O5': (-12.611,89.657,112.618)
O3': (-9.515,87.547,110.352)
C2: (-8.249,99.540,118.134)
OP1: (-2.582,94.771,119.630)
OP2: (-4.578,94.326,118.077)
C4: (-9.006,97.474,117.371)
O5': (-4.014,96.646,118.883)
C3': (-4.877,98.951,120.543)
C1': (-5.843,99.903,118.629)
O4': (-4.616,99.296,118.251)
C5': (-3.099,97.700,119.209)
P: (-3.459,95.203,118.510)
O2: (-8.450,100.723,118.471)
C4': (-3.842,98.985,119.437)
C2': (-5.791,100.097,120.145)
O2': (-5.223,101.361,120.428)
N1: (-6.945,99.023,118.190)
N3: (-9.258,98.738,117.717)
N4: (-10.026,96.724,116.960)
C6: (-6.705,97.722,117.839)
C5: (-7.694,96.922,117.429)
O3': (-4.289,99.128,121.819)
OP1: (-2.582,94.771,119.630)
OP2: (-4.578,94.326,118.077)
C4: (-9.006,97.474,117.371)
O5': (-4.014,96.646,118.883)
C3': (-4.877,98.951,120.543)
C1': (-5.843,99.903,118.629)
O4': (-4.616,99.296,118.251)
C5': (-3.099,97.700,119.209)
P: (-3.459,95.203,118.510)
O2: (-8.450,100.723,118.471)
C4': (-3.842,98.985,119.437)
C2': (-5.791,100.097,120.145)
O2': (-5.223,101.361,120.428)
N1: (-6.945,99.023,118.190)
N3: (-9.258,98.738,117.717)
N4: (-10.026,96.724,116.960)
C6: (-6.705,97.722,117.839)
C5: (-7.694,96.922,117.429)
O3': (-4.289,99.128,121.819)
Image (generated by PyMOL):